Pseudoliparis swirei (Mariana hadal snailfish): 130210698
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Entry
130210698 CDS
T09868
Symbol
zgc:162872
Name
(RefSeq) LOW QUALITY PROTEIN: BAR_ACAPs and ArfGap_ACAP domain-containing protein
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130210698 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130210698 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130210698 (zgc:162872)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
130210698 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130210698 (zgc:162872)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130210698 (zgc:162872)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
Ank_2
ArfGap
PH
Ank
Ank_4
Ank_5
BAR
PRIMA1
PH_11
DUF3990
Motif
Other DBs
NCBI-GeneID:
130210698
NCBI-ProteinID:
XP_056297154
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Position
20:complement(963501..1005163)
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AA seq
645 aa
AA seq
DB search
MDTLLDFEECVKDSPDFRLKLELFEADVSVLETRVDKVMKLCANMVEAGQAYSAANQLFL
TGLAELCMSPKQDRVITNCLNHFNQGLQEMVSFHTMFFDQTQRAISHQLTNLCAQFLPQL
GDTRRELVRIRGALQAAALKSSQASRLRAADGERAXRPAAASRPVLQHFALDYCLQLNTF
KTQQRVDVLNSVFSFVHAQFTFFHQGFDLLRDLEPTMKSMAAQLSQASSDCAAQRKELEN
QHLLAQRDASGEPTVCPCPGSDDIIQGHLFKRCRRKPKTWKRCWFSIRDNQLLYRKSHKV
DSVVLFQDLRLCAVKSLETLDRLFCFQLLSVQKLCLLQADSQQLLHLWLSALHGSIDRAY
RGREVLCTSTSEPPPAPGPPPHRPPRVLAVALGAPGNQLCCDCGEEEPHWASCNLGVTLC
IQCSGVHRAEKEAWISEKYVDRRFVSARGQKVDAQWLYRAAEAGDLVAMATALAQGSEVN
QSITEEEGRTALIGAAVGGSLSACEFLLLNRANINHRDQRGRGALHAAAAAGHTGQVCLL
LKRGANQYAADERGQDPLAIAVETAHADIVTLLRTARMNEEMRDSDAVFGAMGDDETFQD
IFRDFSDMASHDPERLSRRQFSRPGEQQEEEEQEEQEEEQEEEKG
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggacacgctgctggactttgaggagtgtgtcaaagactcacctgacttcagactgaag
ctcgagctgttcgaggcggatgtttctgtgctcgagacacgagtggacaaggtgatgaag
ctttgcgctaacatggtggaggcgggacaagcgtacagcgcagccaatcagctgttcctg
accggcctggctgagctctgcatgtcccccaagcaggaccgcgtcatcacaaactgcctg
aaccacttcaaccagggcctgcaggagatggtcagcttccacacaatgttctttgatcag
actcagagagccatcagccaccagctgaccaacctctgtgcacagttcctgccccagctg
ggggacaccaggagggagctggtccggatccggggggccctgcaggcggcggccctgaag
agttctcaggcgtctcgtctccgagccgcagacggcgagcgggcatgacgtcctgccgct
gcatcgcgcccggtgctgcagcactttgccctggactactgtctgcagctcaacactttc
aagactcagcagagagtcgacgtcttaaactcagtgttctccttcgtccacgctcagttc
accttcttccaccaaggattcgacctcctccgggacctggagcccaccatgaagtcgatg
gcagcacagttgtctcaggcgtcttcagactgtgcagcgcagagaaaagagctggagaac
caacacctgctggcccagagagatgcttctggagagccgacggtctgcccgtgtcccggt
agtgatgacatcatccagggtcacctgttcaagcgctgcaggaggaaacccaaaacctgg
aagagatgctggttttccatcagagacaaccagctcctgtacaggaagtcacacaaggtg
gactctgtggttctgttccaggatctcagactttgtgccgtcaagtctctggagactctg
gaccgactgttctgtttccagctgctgtcagtccagaagctctgtctcctgcaggctgac
tctcagcagctgcttcatctctggctcagcgctctgcacggcagcatcgaccgggcgtac
cgcgggagagaggtactgtgtacaagtacctcagagcccccccccgccccgggccccccc
cctcacaggccccccagggtgctggccgtggccctcggggctccaggcaaccagctgtgc
tgtgactgtggggaggaggagcctcactgggcctcctgcaacctgggagtcaccctgtgt
atccagtgctccggagtacacagggcggagaaggaggcgtggatctcagagaagtatgtg
gacaggaggttcgtctcagcgcgaggtcagaaggtcgacgcccagtggctctaccgagcg
gcggaggccggggacctggtggccatggcaacggcgttggcccaggggtcagaggtcaac
cagagcatcacagaggaggagggacgcacggcgctcataggagctgctgtaggggggtcg
ctgtcggcctgtgaatttctgctgctgaacagagcgaacatcaaccaccgagaccagaga
ggacgaggagcgctccacgctgctgctgctgctggacacacgggacaggtgtgtctgctg
ctgaagaggggagccaatcagtacgctgcggacgaaaggggccaggacccgttggccatc
gccgtggaaaccgcccacgctgacatcgtcacactactgcggacggccaggatgaacgaa
gagatgagggactcagacgccgtgtttggagcgatgggagatgacgagacctttcaggac
atcttccgagacttcagcgacatggcgtcacacgaccccgagaggctgagccgccggcag
ttcagccgccccggggagcagcaggaggaggaggagcaggaggagcaggaggaggagcag
gaggaggagaaagggtga
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