Pseudoliparis swirei (Mariana hadal snailfish): 130210699
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Entry
130210699 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 4-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130210699
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
130210699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF_3
EGF
TB
hEGF
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
130210699
NCBI-ProteinID:
XP_056297155
LinkDB
All DBs
Position
20:complement(1008306..1056184)
Genome browser
AA seq
1542 aa
AA seq
DB search
MLQPRLCFLSFVLIVFVSPPPADGQTVSGGGAVDRLKVMFTPTVCKVRCSQDRCANYCER
GNVTTLYSSDVGGGGGGRRDSSHGLGFRVFLCPLLCKNGGVCLQKDRCLCPPNFSGKFCQ
IPVTAVAHPASSSSGSTNEIVNPEMRSAPTTNQELTRSEFLMPLSHNRETGMSGAPGPSM
VQVRVQHPPEASVNVHQVLKVSGSSPALRTLTSSSSGSAGAPSPAAGGVQAQTVRGGGTF
TQSGKFKYCFSQVTAGQCSAPLPGLRSLEICCRGVGKAWGTTDCVLCPDTTGKRCPVGFK
GPNGTQCVDVNECLQPGRCENGICVNTRGSYSCVCRVGFILDASNGVCISQAVISEEKGQ
CHRVVGWGLGPSSCSLPILRNITKQICCCSRVGKAWGPECLRCPYFGSACPLLPIGCSDV
DECLLSPCVSGRCDNTPGSFHCVCRHGYRLHNNTCTDVDECAEPSQCPGQVCVNAVGSYR
CTSCQPGYTLTNRQCADVNECEDSQTCAGQRCVNTDGSYSCTCEDGYRSVRGVCADVDEC
ASVGVCEAERVCVNTVGSFTCDCPPGYRTSGLGRQCRDVDECVQSSQCPGQQCVNTVGSF
RCVSCQPGYSSRDGSCQDVDECASVGVCEAERVCVNTVGSFTCDCPPGYRTSGLGRQCRD
VDECVQSSQCPGQQCVNTVGSYRCVSCQPGYSSRDGSCQDVDECASVGVCEAERVCVNTV
GSFTCDCPPGYRTSGLGRQCRDVDEWQSSQCPGQQCVNTVGSYRCVSCQPGYSSRDGSCQ
DVDECASVGVCEAERVCVNTVGSFTCDCPPGYRTSGLGRQCRDVDECVQSSQCPGQQCVN
TVGSYRCVSCQPGYSSRDGSCQDVDECASVGVCEAERVCVNTVGSFTCDCPPGYRTSGLG
RQCRDINECLETDFCFPRGECVNSPGSYSCVCSEGFTLSANRTACVDVDECTNQTLCGGH
AYCQNLRGTYLCVCDQGFSSAPDGRSCEDEDECVSLPGVCGSAHCHNVDGSFMCECHRRG
HEFDAGSRRCVSTEPRVETDPGSSSSSSSSSSSMPPLPAPRPGEQRECYYNLMEAGTCSL
LASNSTQQECCCTLGEGWGLGCQFHRCPPAGSAHFLSLCPSGRGYLTTGTGAFSYADVDE
CKRFHPEVCRGGVCVNNIPGYHCYCSSGYVYNSTLLECVDHDECEEESCVGGVCVNTVGS
YYCSCPPPMVLDDTQRTCVNSSHLTMDESRSLCWQHVTADLVCQSPLLGAQVSFTDCCCL
YGEGWGMQCALCPPTDSDDYAALCRSFLPALFPERFTDPGPEPGVRPEPGRGGATPPYFP
PFSPDSFPPAVAPDYTTPQQGAAEGLDPMSRTSELRCLPGFYPEGGVPLSFLLPPDPRAE
RAFGAPPPPPRRGAPPLSRALLPGGPYPVEQEEEEEEEVGWRPGPPFPPFTERSRGGAPR
RVYERRFESYAGLNAAEDCGILQGCENGRCIRVAEGYTCDCYHGYELDMTSMTCADVNEC
EDVVSVDFPCVNARCVNTDGSFSCVCRRGYEMSHRPNHCVAA
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcctcgactctgcttcctgtccttcgtcctcatcgtcttcgtctctcctccg
ccagcggatggacagacggtgtcagggggcggagccgtggaccggctcaaggttatgttc
acgcccaccgtctgcaaggtgcgctgcagccaggaccgatgtgccaactactgcgagcga
ggcaacgtgaccacgctgtacagcagcgacgtgggggggggaggaggaggaaggagagac
agctcccacgggctgggcttcagagtcttcctctgtcctctgctgtgtaagaatggaggc
gtctgcctgcagaaggaccgctgtctctgcccgcccaacttcagcgggaagttctgccag
atccccgtcaccgcagtggcgcaccctgcttcgtcctcctcaggctccaccaatgagatt
gtcaatccagagatgcgttccgccccgacgaccaatcaggagctgacccggtctgagttc
ctcatgccgctgagtcataacagggagacggggatgtctggagctcccggcccctccatg
gtgcaggtcagagttcagcacccccctgaggccagcgtgaacgtccaccaggtcctcaag
gtctctgggtccagccccgccctccggaccctcacctcctcctcctcggggtcggcgggc
gctccgtctccagcagccgggggggtccaggcccagacggtgagggggggcggcacgttc
acccagagcggcaaattcaagtactgtttcagtcaggtgacggccggccagtgcagcgct
cccctccctggtctccgcagcttggagatctgctgtagaggagttggtaaagcctggggg
acgacggactgtgtcctctgtcctgatacgacaggtaagagatgtcccgttggcttcaag
ggacccaacggaacacagtgtgtcgatgtgaatgagtgcctccagccgggccgctgtgag
aacgggatctgtgtgaacaccagagggagttacagctgtgtgtgcagggtgggcttcatc
ctggacgcctccaatggggtctgcatctcccaggcggtgatatcggaggagaagggccag
tgccaccgggtggtgggttggggtctcggcccctcctcctgctcgctgcccatcctcagg
aacatcaccaagcagatctgctgctgcagccgcgtgggcaaagcctgggggcccgagtgc
ctgaggtgcccctacttcggttcagcctgtcccctgctccccattggctgctcagacgtg
gacgagtgtctcttgtctccgtgcgtctccggtcgctgtgacaacacgcccggcagcttc
cactgcgtctgtcgccatggttaccggctgcacaacaacacctgcacagacgtggatgag
tgtgcggagccgtctcagtgtcccggtcaggtgtgtgtgaacgctgtggggtcgtaccgc
tgtacgtcatgtcagcctggatacacactcaccaacagacagtgtgcagacgtgaacgag
tgtgaggactcccagacgtgtgccgggcagcggtgtgtgaacacggacgggtcctacagc
tgcacctgtgaggacgggtaccgcagtgtgaggggagtgtgtgcagacgttgacgagtgt
gccagcgtgggggtgtgcgaggcagagcgtgtgtgtgtgaacaccgtcggctcgttcacc
tgtgactgtccgcccgggtatcgaacctccggcctggggagacagtgcagagatgtggat
gagtgtgtgcagagttctcagtgtcccggtcagcagtgtgtgaacacagtgggatcgttc
cgctgtgtgtcctgtcagcctggatacagcagcagagacggctcctgtcaggacgttgac
gagtgtgccagcgtgggggtgtgcgaggcagagcgtgtgtgtgtgaacaccgtcggctcg
ttcacctgtgactgtccgcccgggtatcgaacctccggcctggggagacagtgcagagat
gtggatgagtgtgtgcagagttctcagtgtcccggtcagcagtgtgtgaacacagtggga
tcgtaccgctgtgtgtcctgtcagcctggatacagcagcagagacggctcctgtcaggac
gttgacgagtgtgccagcgtgggggtgtgcgaggcagagcgtgtgtgtgtgaacaccgtc
ggctcgttcacctgtgactgtccgcccgggtatcgaacctccggcctggggagacagtgc
agagatgtggatgagtggcagagttctcagtgtcccggtcagcagtgtgtgaacacagtg
ggatcgtaccgctgtgtgtcctgtcagcctggatacagcagcagagacggctcctgtcag
gacgttgacgagtgtgccagcgtgggggtgtgcgaggcagagcgtgtgtgtgtgaacacc
gtcggctcgttcacctgtgactgtccgcccgggtatcgaacctccggcctggggagacag
tgcagagatgtggatgagtgtgtgcagagttctcagtgtcccggtcagcagtgtgtgaac
acagtgggatcgtaccgctgtgtgtcctgtcagcctggatacagcagcagagacggctcc
tgtcaggatgttgacgagtgtgccagcgtgggggtgtgcgaggcagagcgtgtgtgtgtg
aacaccgtcggctcgttcacctgtgactgtccgcccgggtatcgaacctccggcctgggg
agacagtgcagagacatcaacgagtgcttggagacagacttctgcttccccagaggagag
tgtgtgaactctcccggctcctacagctgtgtgtgttctgagggcttcacgctcagcgcc
aaccggaccgcctgcgtggacgttgacgagtgcaccaatcagacgctgtgtggaggccac
gcctactgccagaacctccgagggacgtacctgtgtgtgtgtgaccagggctttagctcc
gcccccgacgggcggtcctgtgaggacgaggacgagtgcgtgtcgctgcccggcgtgtgt
ggctccgcccactgccacaacgtggacggctccttcatgtgtgagtgccaccggcggggc
cacgagttcgacgccggcagccgacggtgcgttagcacggagccacgagtggagacggac
cccggctcctcctcctcctcctcctcctcctcctcctccatgccccccctccccgcgccg
cgccccggggagcagagggagtgctactacaacctgatggaggcggggacctgcagcctg
ctggcctccaactccacccagcaggagtgctgctgcaccctgggggaggggtgggggctg
ggctgccagttccaccgctgcccccccgccggctccgcccacttcctgtccctgtgtccc
agtgggagaggatacctgaccactggaactggagccttcagctacgcagatgtggacgag
tgtaagcgcttccatccagaggtgtgtaggggcggagtctgtgtcaacaacatcccgggg
taccactgctactgctccagtggatacgtgtacaacagcacgctgctggagtgtgttgac
catgacgagtgtgaggaggagagctgtgtgggcggagtctgtgtgaacacggtggggtcg
tattactgcagctgtcctcctccaatggtgctcgacgacacgcagcgcacctgtgtcaac
tcctcccacctcactatggacgagagccgctccctgtgctggcagcacgtcacggcggac
ctggtgtgccagagtcctctcctgggggcgcaggtgagcttcacggactgctgctgcctg
tacggggagggctggggcatgcagtgcgccctgtgcccccccacggactcagacgactac
gccgcgctctgccgttctttccttcctgctctctttccggagagattcactgatcctgga
ccagaacccggagtgagaccagaaccaggacgaggaggtgccactcctccatacttccct
cccttcagtcccgactccttccctcctgcggtggctcctgactatactactccccagcag
ggggcagcagagggtttggatcctatgagccggacttccgagctccgatgcctccctggt
ttctaccctgaaggaggcgtgcccctgtctttcctcctccctcctgacccgcgggctgaa
cgggcgttcggggctcctcctcctcctccccgacggggtgctcctcctctcagccgggcc
ctgctgcccggggggccctacccggtggagcaggaggaggaggaggaggaggaggtgggg
tggaggccgggcccccccttccccccctttactgagaggagccgaggaggagcaccgaga
agggtctatgagaggcggtttgagtcctatgccggcctgaatgcagcagaggattgtggg
atacttcagggctgtgagaacggcaggtgtattcgtgttgccgagggttacacctgtgac
tgttaccatggatacgagctggacatgacctccatgacctgtgcagatgtcaacgagtgt
gaggacgttgtctccgtggacttcccctgtgtgaacgctcgctgtgtgaacactgacgga
tcgttcagctgcgtctgcaggagaggatacgagatgtcccaccggcccaaccactgcgtg
gcggcctag
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