Pseudoliparis swirei (Mariana hadal snailfish): 130210717
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Entry
130210717 CDS
T09868
Name
(RefSeq) RNA-binding protein 4-like
KO
K13189
RNA-binding protein 14
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130210717
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130210717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
DbpA
HTH_9
Motif
Other DBs
NCBI-GeneID:
130210717
NCBI-ProteinID:
XP_056297177
LinkDB
All DBs
Position
3:8220335..8241889
Genome browser
AA seq
531 aa
AA seq
DB search
MSGENVKLFVGNLPLDATHDELTKLFSAYGEINTCSLLRQYAFVTLKGEGAADRAIRHLD
GKEYRGRPLVVEESRARPPNSTKVFVGNLAATCSADDLHGLFSTFGRVLDCDKVKARLCS
NVGYAFVHMERKEEALVAIDALNGTMYKGRQLAVELSKAQPLINQIAMAGNSNNQGGRDG
LLARPPPSLEHHQSQAAVLAAAAAAAAGLPIQVQQSVHNSFYNTTAFDPTYAALKGITSA
KGADGVIYGALASQVYGTVADQVYQDLANQNSSTVASLEETDPQTGPDPTTLFEAARAKF
FQEGQKVLAEQQSGRKAAPADSERDRSPIRGSRTPLLPDPVPGSFGQSRSKRRALLPTPP
GGVEEPPAAANTPESSDPVTRSYTEYYQQLQQYQQYQQYQQQQYQYLQYAYTNPPPPPPP
PPATTQASTTTPPGTYSAPPTYTAPGAYDTSGSYHASSGSYTASSGNYDAATGSYDASGG
YGAPGAYDSSGAYASAGGHSASTPYEQTPAHGQPTPQRNDYPYNTPEPPYR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgagaacgtgaagttgtttgtcgggaaccttcctttagatgcaactcacgac
gagttaacgaagctcttttctgcatatggagagatcaacacctgctctttgctcagacag
tatgccttcgtcactctgaagggagagggggcagcagacagggccatacgacatcttgat
ggcaaagagtacagaggcaggccgctggtggttgaggagtcacgtgcacgcccacccaac
tccactaaagtgtttgtggggaacctcgctgcaacatgttcagcagatgacctccatggg
ttgttttcaacctttggaagagttttagactgtgataaagtcaaagccagattatgctca
aatgttggctatgcatttgtgcatatggagaggaaggaggaggcccttgtagctattgac
gcactcaacgggaccatgtacaagggccgccagttggccgtagagctgtccaaagcccaa
cctttgatcaaccagattgcaatggctggaaattcaaacaaccaaggtggcagggacggt
cttcttgcgcgaccacctccatcactagagcaccatcagagtcaagcagctgtgctagca
gcagctgcagccgctgcggctggactaccaatacaagttcaacaaagtgtccataactca
ttctacaacacaacagcctttgaccccacctacgctgctttgaagggcattacaagcgct
aaaggtgcagatggggtgatatacggtgctctagccagccaggtgtacggaaccgttgct
gaccaggtgtatcaagacttggccaatcagaattcttcaacggttgcctcccttgaagaa
acggatccacaaactggaccagacccaacaacgcttttcgaggcagcaagagcaaagttc
tttcaggaggggcagaaggttctggcagagcagcagtcgggaagaaaagcagcacctgca
gacagtgagcgagatcgcagcccaatcagaggaagtcgaaccccgctcctccccgacccc
gttccaggttcctttggtcagagccgatcgaagcgccgcgccctactgcccacgccacct
ggaggagttgaagagcccccggctgccgccaacacacctgaatcgtcagatcctgtcact
aggtcttacaccgagtactaccaacagctgcagcaataccaacagtatcaacagtaccag
cagcagcagtaccagtacctccagtatgcctacaccaatcccccccctcctcctccgcct
ccaccagccaccacacaggcctccaccacaacacctccagggacgtactcggcgcccccg
acgtacacggcaccgggggcctatgacacttcgggaagttaccacgcctcgtcagggagc
tacacggcttcatctggaaactacgatgccgcgacaggaagctatgatgcatctggaggc
tacggggcacccggagcatatgattcatcgggagcttacgcatcagcgggaggccactcc
gcatccacaccgtatgagcagacacccgcacacgggcaacccacgccccagcgcaatgat
tacccttacaacacgccagaacccccttaccgatag
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