Pseudoliparis swirei (Mariana hadal snailfish): 130210822
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Entry
130210822 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pswi04030
]
130210822
G protein-coupled receptors [BR:
pswi04030
]
Others
Chemoreception
Vomeronasal pheromone
130210822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
aRib
Motif
Other DBs
NCBI-GeneID:
130210822
NCBI-ProteinID:
XP_056297285
LinkDB
All DBs
Position
20:complement(19525954..19538581)
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AA seq
1642 aa
AA seq
DB search
MPDPLRCSGSIDTRELRFSRAMIFAIEEINNSTELLPGIKLGYQIYDSCASVPVAVHVAF
QLSGGLDPVFYTGNNCSQSGKVMAIVGESGSTPSISMSRIIGPFNIPQVSHFATCACLSD
KQQYPNFFRTIPSDKIQADALVKLVKHFGWTWIGAVRSDSDYGNNGMASFLNAAHKEGIC
VEYSESFYRTHPRSRIQRVADIIRRSTAIVIVAFTSTADMRILLEELSLKPFPPHQWIGS
EAWVTDPDLLRFSFCAGAVGFSIEQSVISGLRDFLLDFSPSKVTASPMFTEFWEDAFNCR
LGKTAATDKTACDGTEDLETIQSPYTDTSQLRITNMVYKAVYAIAHAIHNAVCQETTSIT
QCDKLSSIESKQILTQLKKVNFSQNGYHVSFDDSGDPVATYELVNWQKTESGSIELVVVG
HYDASLPVGQELRINKNLTWVEGGTQVPVSVCTDSCPAGTRKVLQKGKPICCYDCIPCPE
GEISNATDSPDCFLCSKELWPNEKRDTCLPKPVEFLSFNEALGIIMAAFSVGGACLAIIT
AAVFHRHRTSPIVRANNSELSFLLLFSLTLCFLCSLTFIGAPSEWSCMLRHTSFGITFVL
CISCVLGKTIVVLMAFKATLPGGNVMKWFGPPQQRMTVVSFTCIQVIICTLWLVLSPPFP
MKNLTTYKERIILECALGSAIGFWAVLGYIGLLAVFCFVLAVLARKLPDNFNEAKLITFS
MLIFCAVWVTFIPAYVSSPGKFTVAVEIFAILASSFALILCIFAPKCFIILFKPEKNTKK
HLMNKKAGLTEDRTGVGVSTEDSSVKCELQGILRRPAFSMDGDYVIGGVFAIHYSMHTMK
HNYTTMPDPVRCSGSIVTRELRFSRAMIFAIEEINNSTELLPGIKLGYQIYDSCASVPVA
VHAAFQLSGGLDPVFNTGDNCSQSGKVMAIVGESGSTPSISMSRIIGPFNIPQVSHFATC
ACLSDKQQYPSFFRTIPSDQFQADALAKLVKHFGWTWIGAIRSDSDYGNNGMASFLNAAH
KEGICVEYSESFYRTNPRSRIQRVADIIRRSTAIVIVAFTSPGDMRILLEELSLKPFPPR
QWIGSEAWVTDPAMLRFSFCAGAVGFGIEQSVIPGLRDFLLDVSPSKVADSPVLTEFWED
AFDCRLGKSEKTTDKTACDGTEDIEMIQSPYTDTSQLRITNMVYKAVYAIAHAIHNAVCQ
ETHSIAHCDKLSSIESKQVLTQLKKVNFSQNGYHVSFDDSGDPVATYELINWQKTESGSI
ELVAVGHYDASLPVGQELRINKNLTWVEGGTQVPVSVCTNSCPAGTRKVLQKGKPICCYD
CIPCPEGEISNATDSPDCFLCSKELWPNEKRDTCLPKPVEFLSFNEALGIILATFSVGGA
CLAIITAAVFHRHRTSPIVRANNSELSFLLLFSLTLCFLCSLTFIGAPSEWSCMLRHTAF
GITFVLCISCVLGKTIVVLMAFKATLPGGNVMKWFGPPQQRMTVLSFTCIQVIICTLWLV
LSPPFPMKNLTTYKERIILECALGSAIGFWAVLGYIGLLAVFCFVLAVLARKLPDNFNEA
KLITFSMLIFCAVWVTFIPAYVSSPGKLTVAVEIFAILASSFALILCIFAPKCFIILFQP
EKNTKKHLMNKSQYXNIKFGEN
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatccactaagatgctcagggagcattgatacccgtgaactgcgcttctcacgc
gcaatgatcttcgccatcgaggagattaacaacagcacggagctgctgccgggcatcaaa
ctcggttatcagatctatgactcgtgtgcctctgtgcctgtagcggtgcatgtggcattc
cagctgtcaggcggcctggacccggtgttttacaccggcaacaattgttcacaatctggt
aaagtgatggccattgttggtgagtctgggtccacaccatccatcagcatgtctcgcatc
atcgggccctttaacattcctcaagttagtcactttgccacttgtgcatgcctgtctgat
aagcagcagtatccaaatttcttcagaaccatcccaagtgacaagatccaggctgacgca
ctggtaaagctggtaaaacactttggttggacttggataggtgctgtccgatcggactcg
gactatggtaacaatggcatggcgtcgttcctaaacgcagcacacaaagaggggatctgt
gtggaatattctgaatccttctatcggacacatccacgaagcaggatccagagagtagct
gacattatccgcaggtcgacagctattgttattgtggcattcacatctactgcagacatg
aggattctgctggaagagctgtctctcaagccctttccacctcaccagtggataggcagt
gaggcctgggtaactgacccagacttgctgaggttcagtttctgtgctggagcagtcgga
tttagcattgagcaatccgttatttcaggtctgagagacttcctgctggatttctctccc
tctaaagtgactgcctctccaatgtttactgagttctgggaggatgcattcaactgcagg
ctgggaaaaacagcagccacagataagactgcgtgtgatggaactgaagacctagaaacg
atccagagcccgtacactgacacatctcagctccgaatcactaacatggtctacaaggct
gtttatgcaatagcacatgccattcataatgcagtgtgtcaggaaacaacttctataacc
cagtgtgacaaactgagcagcatagagtccaaacagattctcactcagttgaaaaaagtc
aatttttcccaaaatggttatcatgtgtcatttgatgacagcggggatcctgtggccaca
tacgagttggttaactggcaaaaaactgagagtggcagcattgagctggtggtagtaggg
cactacgatgcatcactgccagtgggacaggaactccgtatcaacaagaacctcacctgg
gtggagggtggcacacaagtgcctgtgtcagtgtgcactgacagctgtcctgcaggaact
cgtaaagtgctgcagaaaggaaaacccatctgctgttatgattgtataccttgtcctgag
ggggagattagtaacgctacagattcccctgattgtttcctttgctccaaggaattatgg
cccaatgaaaagagagacacttgtctcccaaagcctgtagagtttctttccttcaacgag
gccctaggaatcatcatggcggcattctcagttggtggtgcctgtcttgccattataaca
gcggctgtgttccaccgtcacaggacatccccgattgtcagagccaacaactctgagctg
agcttcctgctgctcttctctctgactctctgtttcctatgctccttaaccttcattgga
gcaccctctgagtggtcctgcatgctgcgccacacatcgtttgggatcaccttcgtcctc
tgcatctcttgtgttcttggaaaaacaatagttgtgttaatggctttcaaagctactctc
ccaggtggtaatgttatgaaatggtttggtcctccacagcaaaggatgactgtagtgtct
ttcacttgtattcaagttataatatgtactctttggttggttcttagtcctccttttcca
atgaaaaacctaaccacatacaaggagagaatcatcctggagtgtgcattaggctcagct
attgggttctgggctgtgctcgggtacatcggcctgctggctgtcttttgctttgtgtta
gctgtcctagcccggaaactacctgataattttaatgaagccaagcttatcaccttcagc
atgctgatattctgtgcagtctgggtcacctttatcccagcatatgtcagttctcctggg
aaatttactgtggctgtggagatatttgccattcttgcttccagttttgcactaatattg
tgtatatttgctccaaagtgtttcatcatattgtttaaaccagagaaaaacaccaagaaa
catttaatgaacaaaaaggctgggcttacagaggataggactggtgttggggtcagcacc
gaagactcatctgtgaaatgtgagctccagggtattcttcgtcgacctgctttctcaatg
gatggtgactacgttattgggggtgttttcgccatacattactccatgcacacgatgaag
cataactacaccaccatgcctgatccagtaagatgctcagggagcattgttacccgtgaa
ctgcgcttctcacgcgcaatgatcttcgccatcgaggagattaacaacagcacggagctg
ctgccgggcatcaaactcggttatcagatctatgactcgtgtgcctctgtgcctgtagcg
gtgcatgcggcattccagctgtcaggcggcctggacccggtgtttaacaccggcgacaat
tgttcacaatctggtaaagtgatggccattgttggtgagtctgggtccacgccatccatc
agcatgtctcgcatcatcggaccctttaacattcctcaagttagtcactttgccacttgt
gcatgcctgtccgataagcagcagtacccaagtttcttcagaaccatcccaagtgaccag
ttccaggctgacgcgctggcaaagctggtaaaacactttggttggacttggataggtgct
atccgatcggactcggattatggaaacaatggcatggcgtcgttcctaaacgcagcacac
aaagaggggatctgtgtggaatattctgaatccttctatcggaccaacccacgaagcagg
attcagagagtagccgacattatccgcaggtcgacagctattgttattgtggcattcaca
tctcctggagacatgaggattctgctggaagagctgtctctcaagccctttccacctcgc
cagtggataggcagtgaggcctgggtaactgacccagctatgctgaggttcagtttctgt
gctggagcagtcggatttggcattgagcaatctgtcattccaggtctgagagacttcctg
ctggatgtctctccctctaaagtggctgactctccagtccttactgagttctgggaggat
gcatttgactgcaggctgggaaaaagtgagaaaaccacagacaagactgcgtgtgatgga
actgaagacatagagatgatccagagcccgtacactgacacatctcagctccgaatcact
aacatggtctacaaggctgtttatgcaatagcacatgccattcataatgcagtgtgtcag
gaaacacattctatagcccattgtgacaaactgagcagcatagagtccaaacaggttctc
actcagttgaaaaaagtcaatttttcccaaaatggttatcatgtgtcatttgatgatagc
ggggatcctgtggccacatacgagctgattaactggcaaaaaactgagagtggcagcatt
gagctggtggcagtagggcactacgatgcatcactgccagtgggacaggaactccgtatc
aacaagaacctcacctgggtggagggtggcacacaagtgcctgtgtcagtgtgcactaac
agctgtcctgcaggaactcgtaaagtgctgcagaaaggaaaacccatctgctgttatgat
tgtataccttgtcctgagggggagattagtaacgctacagattcccctgattgtttcctt
tgctccaaggaattatggcccaatgaaaagagagacacttgtctcccaaagcctgtagag
tttctttccttcaacgaggccctaggaatcatcctggctacattctcagttggtggtgcc
tgtcttgccattataacagcggctgtgttccaccgtcacaggacatccccgattgtcaga
gccaacaactctgagctgagcttcctgctgctcttctctctgactctctgtttcctatgc
tcattaaccttcattggagcaccctctgagtggtcctgcatgctgcgccacacagcgttt
gggatcaccttcgtcctctgcatctcttgtgttcttggaaaaacaatagttgtgttaatg
gcgttcaaagctactctcccaggtggtaatgttatgaaatggtttggtcctccacagcaa
aggatgactgtactgtctttcacttgtattcaagttataatatgtactctttggttggtt
cttagtcctccttttccaatgaaaaacttaaccacatacaaggagagaatcatcctggag
tgtgcattaggctcagctattgggttctgggctgtgctcgggtacatcggcctgctggct
gtcttttgctttgtgttagctgtcctagcccggaaactacctgataatttcaatgaagcc
aagcttatcaccttcagcatgctgatattctgtgcagtctgggtcaccttcatcccagca
tatgtcagttcccctgggaaattgaccgtggctgtggagatatttgccattcttgcttcc
agttttgcactaatattgtgtatatttgctccaaagtgtttcattatattatttcagcca
gagaaaaacacaaagaaacatttaatgaacaaaagtcaatattaaaacataaagtttgga
gaaaactaa
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