Pseudoliparis swirei (Mariana hadal snailfish): 130210823
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Entry
130210823 CDS
T09868
Name
(RefSeq) extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pswi04030
]
130210823
G protein-coupled receptors [BR:
pswi04030
]
Others
Chemoreception
Vomeronasal pheromone
130210823
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
RVT_1
NCD3G
ALKBH8_N
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
130210823
NCBI-ProteinID:
XP_056297286
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All DBs
Position
20:19551627..19560698
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AA seq
1615 aa
AA seq
DB search
MDTLTNRLQQGSQYFVYTRDQLFALRTRNHAGKVYPIPEELLRRYRGSRAGALVKARRLQ
KLWRFKPAIPSFVMGNVNSLANKTDELAALVMNVKLYRECSLLCLTETWLTSNIPDLNVE
LPGFTTVRADRDLKLSGKRKGKSNHNLVFLQPKYTPKVRRQPTTTRSFRKWTPEAEDALR
DCFESTDWGVLQDSFGEDIEGVTHCTTDYLNFCMDIVAPTKIVRCFPNNKPWITSNVKHL
LNMRKRAFKEGDQAERKRVQGELKTMLREAKDSYRRKVEQKLQENNMREVWDGRKTITGC
KKSGSTVEGDVVRANQFNHFYNSQCGPTPSSFQPSAALHSCTPPPPPTITADQVTGELRR
LRPRKAAGPDGVCPRLLKACAVELGEPLQHLFNLSLQLGKVPALWKTSCLIPIPKKTHPS
ELNDFRPVALTSHISKTMERLLLRNLRPQVRHALDPLQFAYQEKVGVEDAIDYLMHRAHS
YLDKGKGAVRIMFFDFSSAFNTIQPLRLSDKLVQMGVNAHLVSWITDYLTERPQFVRLKD
CVSETVLCSTGAPQGTVLSPVLFTLYTSDFTYNTESCHIQKFSDDSAVVGCIRDGREGEY
RSLVDNFVQWCRHNHLQLNATKTKEMVVDFRRSQSLLLPVSIGGVSVEVVNTYKYLGVHL
DSKLDWSANIDAIYKKGQSWLYFLRRLRSFNVCNKLLRMFYQSVVASVLFYAVVCWGGIM
KKRDAGRLDRLVRRAGAVVGMELDCLTSVVEKRTLSRLLTILDNDHHPQHTDEPLTQQSG
GDVVIGGLFPLHYVAPKQHQSYQSKPQLTPCRGFDYRAFRWIMTMVFAVEEINRNLSLLP
GVKLGYRIMDSCDHVHTGLKAFLSLENETGETIDRSTQSQIVPSCLADSPVPAVIGLASS
SPTRAVAHTLGPFNLPLVSYFATCTCLTDKSKYPSFLRTVPSDLFQVRGLVQMVTFLGWF
WVGTIGTTDDYSHYAIQEFSGQLRQQGGCLAFHMTIPKLPTAAVIQKMADRLQSSTAVVV
VVFAREGQMLELILELAQRNVTGIQWVASEAWVTASMLASPRFHSLLEGTLGFSFPGVRI
PGLKEFLLNIRPSPQPGMDFVNMFWEELFSCRLEFRGNQSADANYKGAAEKPVCTGSEDV
RDIDSSFTDVSQVRVSYNVYKAVYAIAHALHTLLNCDSGEHYGKCDNNKSFTSGQLLQHL
KKVNFTNQFEENISFDSNGEPVPLYEIINWQKDSEGEIRFIKVGSYDGLAPLKEQLQIKQ
STIVWTSGQSQVPASLCSSPCSPGSRQARRPGEPHCCFDCLPCADGEISNQTGSTECTKC
AEYYWSDRDQVKCVAGVEEFLSFHEIMGVILVTLTLLGVVLTTIVTAVFQRFRSTPIVKA
NNSEISFLLLLSLKLCFLCSLVFIGQPSVWTCRLRQAAFGVSFVLCLSCLLVKSIVVLLA
FHANAPGSRALKQFGLSQQRTMILCTTAPQIILCAGCILGAPPYPFKNPNYQASTGKIVV
ECKEPWPPGFYLVLGYIGLLAFVCLILAFLGRKLPDTFNEAKLITFSMLIFWAVWISFIP
AYVSSPGKFTVAVEVFAILASSFGLLLCIFVPKCYIILLRPQRNIRKGMTGTYLT
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atggatacacttacgaatcgactgcaacagggcagtcagtactttgtttacacgagggat
cagctgttcgcactgcggacaagaaatcatgctggcaaagtttaccccataccggaggag
ctgttgagacgctaccgtggaagcagagctggggcgttggtgaaggctaggcgcctgcag
aagctgtggaggtttaaaccagctattccttcgtttgtaatggggaatgtaaactcgttg
gccaacaagacagatgagctggcagccctggtgatgaacgtgaagttgtacagagagtgc
agcttactgtgcctcacggaaacctggctaaccagcaacatcccggacctcaacgtggag
ctacccggctttactacggtgagagcggacagagaccttaagctaagtggcaaacggaaa
gggaaatccaatcacaatctggttttcctacaacccaaatacacaccaaaagtgcgcagg
caaccaaccaccacgcgctccttcaggaaatggactcctgaggcagaggatgccctcagg
gactgctttgagtcaactgactggggtgtgctgcaggactcttttggagaggacattgaa
ggggtcacacactgcactactgactacctgaacttttgtatggacattgtcgctcccact
aaaatagtgcgctgcttccctaacaacaagccctggattacctctaatgttaaacatctc
ctcaacatgagaaagagggcattcaaagagggggaccaggcagagcggaagcgcgtacag
ggagagctgaagaccatgctgagagaggcaaaggactcatacagaaggaaggtggagcag
aagctgcaggagaacaacatgagggaggtgtgggatggcaggaaaaccatcacaggctgc
aagaagagcggcagcactgttgagggggatgtggtgagggcaaaccagtttaaccacttc
tacaacagccagtgtggccccactccctccagcttccagccctctgccgctctccacagc
tgcacccctccccccccccccaccatcacggcggatcaggtcacaggagagctgaggaga
ctgcgccccaggaaagcagccggccccgatggagtctgtccaagactcctcaaggcatgc
gcggtggaactgggtgagcctctgcagcatctcttcaacctgagcctccaactggggaag
gtgcctgctctgtggaaaacttcctgcctcatccccatcccgaagaagacgcaccccagt
gagctgaatgacttcaggccagtcgctcttacatcacacatatctaagaccatggagcga
ctgctgcttcgcaacctcagacctcaggtacgccatgcacttgacccgctgcagtttgca
taccaggagaaggtgggcgtggaagatgccatcgactacctaatgcacagggctcactct
tatctggacaaggggaaaggtgctgtgagaatcatgttctttgatttctccagtgccttc
aacaccatccagccgctccgactgagtgacaagctcgtgcagatgggtgtgaacgcccac
ctggtatcctggatcactgactacctgacggagagaccacagtttgtcaggctgaaagac
tgcgtatctgagactgtgttgtgcagcaccggcgctccacaggggactgtgctctcacct
gtcctgtttaccctgtacacatcagacttcacctacaacacagagtcgtgccacatccag
aagttctctgatgactctgctgttgtgggatgtatcagggatggacgggagggtgagtac
aggagcctggtagacaactttgtgcagtggtgtaggcataaccacctgcagctgaacgcc
accaagaccaaggagatggtggtggattttaggaggtctcagtctcttctgctaccagtc
tccatcgggggtgtcagtgtggaggtggtcaacacctacaagtacttaggagttcatctg
gacagtaaactggactggtcagccaacatagatgccatctataagaagggtcagagctgg
ctctacttcctgaggaggctgaggtctttcaatgtctgcaacaaactcctgcgcatgttt
taccagtctgttgttgccagcgtccttttttatgctgtggtgtgctggggaggcatcatg
aagaagagggatgcagggcgactagacaggctggtgagaagggcaggagctgttgttggc
atggaactggactgcctaacatcagtggtggagaaaaggacattgagtaggctgctgacc
atcttggacaatgaccaccacccacaacacaccgatgaacctctgacccagcagtcggga
ggggatgttgtgatcggagggcttttccctctgcattatgtggctccgaagcaacatcaa
agttaccagagcaaacctcagctcacaccttgcagaggctttgactacagagccttccgc
tggataatgaccatggtgtttgctgtggaggaaataaaccgtaatttgagcctgttacct
ggagtaaaactaggatataggattatggacagctgtgaccatgtccacactggcctgaaa
gcttttttgtctttagaaaatgaaacaggggagacaatagataggagtacacagtctcaa
attgtgccctcatgtctagctgactctcctgtgccggctgtgatcggccttgcttcctct
tcccctacaagagctgtagctcacacccttggtccttttaacctcccactggtgagttat
tttgccacttgtacctgtctcactgacaagtctaagtacccatcattcttgcggactgtg
ccaagtgatctctttcaagttagaggtcttgttcagatggtcaccttcttaggctggttc
tgggtgggcacaatagggacaacggatgactacagtcactatgctatccaagaattttcc
ggccagttaagacaacaaggagggtgtctggcatttcatatgaccatcccgaaattaccc
acagcggcagtgatacaaaaaatggcagacaggctacagagttcaaccgcagtggtagtg
gtggtgtttgccagagagggacaaatgctagaattgatcttagagctggctcagagaaat
gtgacaggaatccagtgggtagctagtgaagcgtgggtaactgctagcatgctggcctca
ccccgcttccactctctcttagagggcacgctgggcttctctttccctggagtcaggatc
ccaggcctgaaagagttcttgttgaacatccgcccttctccacaacctgggatggatttt
gttaacatgttctgggaagagctgtttagctgcaggctggagtttagaggaaaccaatca
gctgatgcaaactataaaggtgctgctgaaaagcctgtatgcactggttcagaggatgtg
agggacattgacagcagctttactgatgtatctcaggtcagagtatcctataatgtttat
aaagctgtatacgctatcgcccatgctcttcacactttattaaactgtgattctggagaa
cattatggaaagtgtgataataataaatcattcacttctgggcagttgctgcaacatctg
aagaaagtgaatttcactaaccagtttgaggagaacatttcttttgactccaatggagag
ccggtccctctctatgaaatcattaactggcagaaggatagcgagggtgaaattagattt
ataaaagtgggaagctatgatggtttggctccactgaaagaacagttgcagataaagcaa
agcacaattgtgtggacaagtggacagtcacaggtgcctgcatctctttgtagttcacca
tgctcccctggcagcagacaggccagacgtccaggagagccccactgctgctttgattgt
ttgccctgtgcagacggagagatcagcaaccagacgggttccactgagtgcacaaaatgt
gctgaatactactggtcagacagagaccaggtgaaatgcgtcgctggggtcgaagaattt
ctgtctttccacgaaatcatgggcgtcatcctggtgacactcacactgcttggcgttgtc
ctgacaaccatcgtcactgctgtctttcaacgttttcgttccacaccgatcgtcaaggcc
aacaactcagaaataagtttcctgcttctcctatcgctcaagctgtgcttcttgtgttcc
ctggtgttcattggccagccatctgtgtggacatgtaggctgcgccaggcagcattcggg
gttagctttgtcctctgtctttcctgcctcctcgtgaagagtatagttgttctcttggcc
tttcatgctaatgctcctggttcgagggccctgaagcagtttggtctctctcaacagcgg
actatgatcctctgtactacagctcctcagattattctctgtgccggttgtattttgggt
gcacctccttacccattcaagaacccaaactaccaagcctcaactggaaaaattgttgtg
gagtgtaaggagccatggcctcctggattttatctggtcctgggctacattggtctactg
gccttcgtctgcctcatcctggcgttccttggacgcaagctacccgataccttcaatgag
gcaaagctcatcaccttcagcatgctgatcttctgggctgtgtggatctctttcatccca
gcttatgtcagctcccctggaaagttcactgtggctgtcgaagtatttgctatattagcc
tctagttttggactgttactatgtatatttgtgccaaaatgttatataatattactgcgg
cctcaaagaaacattaggaaaggaatgacgggaacatatctcacatga
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