Pseudoliparis swirei (Mariana hadal snailfish): 130210830
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Entry
130210830 CDS
T09868
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130210830 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130210830 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130210830 (usp16)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130210830 (usp16)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130210830 (usp16)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130210830 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
130210830
NCBI-ProteinID:
XP_056297292
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All DBs
Position
20:15318331..15324732
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AA seq
863 aa
AA seq
DB search
MGKKRGKDKSSREDDDIDLAGPSCRHIKKGTDQTIIKKLSGNSDWTRCQDCKHEENKENI
STTVPQDSEEEKETTAIWMCLKCGNIGCGRNSENQHAIKHNETPRSDPHCLVISLDNWSV
WCYICDDEVQYSRTGHLAQLVTNLKKQTSADPIKRPPTRAKEEDIVLEVEQKSETVKAEE
SEDNEDKSLQKKNAKKESVGISKKSGPSADNSGVSVKGLSNLGNTCFFNAVMQNLSQTQL
LRQTLSKVAEDGISLNITPVASSDLAPISMQLGQPGSLTLAMCQLLNEIQESKKGVVTPR
ELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEIKRVSSGITETLKESRKGKDGEQL
KTIVKEYEKNGFPKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPVFDEAYRKKN
QKKAVQNTSESSQDGGNSPALTNGNDDISSGSGSKYQQKKAKKQAKKQAKQHKRQQKIEG
RVTLDSLSSPGHLEGEQTDPTADAKENADNVTHEEDILSEGNPAQISVSEQVQKNLDPVQ
DEKDKEEEVEEVEEKEDDEDEDDDEEEVIDCDSLATSSVDNRVTVLLDEQQSKDSILDDD
NISDMDLNQEEKTQLANEMEKVTLDDAFIEEPDALDTTMESGDEPLEAKEYTVVSQDPEL
AFRTLATRTAPEKQECSVQSCLFYFTEVETLTQNNSLLCVTCTKRQPNKDNAGGAQKNVY
TDALKQMLISSPPPVLTLHLKRFQQNGFSICKVNRHVHFPLILDLAPFCAVQCKNLTEGN
AQILYSLYGIVEHSGTMRSGHYTAYVKARPVCHNPSSNGFTAEGPVEPPRGSWFHISDTS
VQPASQSKVQSCQAYLLFYERIC
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaagggggaaggacaagagctccagggaggacgatgacattgacctggca
ggtccatcctgcaggcatataaaaaagggaacagaccaaactattataaagaaactctca
gggaattctgattggacgcgttgccaggattgtaagcatgaagaaaataaagaaaatatc
agcaccaccgtgccacaggactctgaagaggaaaaggaaacaacagccatatggatgtgc
ttgaaatgtggcaatataggatgtggacgcaactctgagaaccagcatgccattaaacat
aatgagactcctcggtcggatcctcattgcttggtaatcagtttggacaactggagtgtg
tggtgttacatatgtgatgatgaagtccagtactccagaaccggacatttggctcagctg
gtgaccaacctaaaaaagcaaacttctgcagatcccatcaagagaccaccgacaagagcg
aaggaagaagacattgtgttggaagttgagcagaagtcagagactgtcaaggcagaggaa
agtgaggacaatgaagacaagagccttcaaaagaaaaacgccaagaaagagagtgtcggg
atatcaaaaaagtctggtccatctgcagacaatagtggtgtttcagtaaaggggctgagc
aacctgggaaacacatgtttctttaatgcagtcatgcagaatctttctcaaacacagctc
ttaagacagactctcagcaaagtggcagaagacggtattagtcttaacattacacctgtt
gcctcctcggatctggcacctatttcaatgcagttaggtcagcctggatccctgactttg
gctatgtgtcaactactcaatgagatccaggaatctaaaaagggtgtggttacaccgcgg
gagttgttcacacaagtttgtaaaaaagctgccaggttcaaaggatttcagcagcaagat
agccaggagctgctgcgctaccttctggatgggatgcgagctgaagagatcaaaagagta
agctcaggaatcacggaaacattgaaagaatctagaaaaggcaaagatggagagcagctg
aaaacaattgtgaaagagtacgaaaaaaatggatttcccaaaaactttgtcgaccaagtt
tttggtggggagatgaccagcactataatgtgtcagcagtgtaaaacggtgtctgtcgtc
acagagatgtttttggacctttcccttcccgtttttgatgaggcatacagaaagaagaac
cagaaaaaagcagttcagaacaccagtgagtcgagccaggatggcggaaacagccctgct
ttgacaaacgggaatgatgacatttccagcgggtctggcagcaagtaccagcagaagaag
gcaaagaaacaggcaaagaagcaggcaaagcaacacaagagacagcagaagattgagggc
agagtcactttggacagtctctcatctccgggccacctggagggtgaacagaccgatcct
actgcagatgcaaaggaaaatgctgacaatgtgacacatgaagaagacatattaagtgag
gggaatcctgcacaaatcagtgtgtctgaacaggtccagaagaaccttgacccagtccag
gatgagaaggacaaagaggaggaggtggaggaggtggaggagaaggaggatgatgaggat
gaagatgacgatgaggaggaggtgattgactgcgactcattggctacgtcatcggttgac
aatcgtgttactgtcttattagacgagcagcagtcaaaggacagcatcttagacgatgac
aacatatctgacatggatctgaaccaagaagagaaaacacagctggcgaatgaaatggaa
aaagtaactctggatgatgccttcatagaagaaccggacgccttggatacaactatggag
agtggagatgagccactggaggctaaagagtacactgtagtgagtcaggacccggagctg
gccttccgcacactggctaccaggacagcccctgagaaacaggagtgttcggtccagtcg
tgccttttttacttcacagaagtggaaaccctcacgcagaacaacagcctgctgtgtgtc
acatgcacgaaacggcagccaaacaaagacaacgctggaggagcccagaagaatgtctac
actgatgccttgaagcaaatgctgatctcttctcccccaccagtgcttacccttcatttg
aaaaggtttcaacagaatggattcagtatttgtaaggtgaacagacatgtccatttcccc
ctgatcctggatctagctcccttttgtgcggttcaatgcaagaacttgacggagggaaac
gctcagattttgtacagtttgtacggtatcgtagagcacagcggaacaatgaggtcgggt
cattacacagcgtatgtgaaagcacgacctgtgtgccataacccctcatccaacggattt
acagctgaaggacctgtagagccgcccagaggatcctggttccatataagcgacacaagt
gttcagcctgcgagccaaagtaaagtccagagctgtcaagcctacctcctcttctatgaa
agaatctgctaa
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