Pseudoliparis swirei (Mariana hadal snailfish): 130210842
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Entry
130210842 CDS
T09868
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130210842
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130210842
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
130210842
NCBI-ProteinID:
XP_056297305
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Position
20:complement(13912525..13917296)
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AA seq
701 aa
AA seq
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MLLSLLTNRSMDLDISMLCYVSLKVRRKMPVSHHEHCDKCYNVHCHVSVQISVSCLVVKC
RHNCGATFHICKQEEHQLLCPNEMVPCLNVYYGCPFTMLRHRLARHLEVCPACVVCCSQE
WNRWPVSETDLAFYRNVLENPQSEGNLDVAMALRDQELLFRSIKMKNIFPELMVGESAPQ
NCSADVDSNADEPTCSSDCGEFNGCTRVEGKELSQEKRDALAKSRDVDAIQNCSSWEKIF
NEEMEGCEQTVNNLNEKKEKAKEEQESLNRRGETRDSHRENAAGALRRDGTTGLAPWQDG
VLQRLSQQVNIAEYNMYLAHNGAMLIDFGQLAACTPREKDFVYGNLEPIEVQTVRSFTAP
TSYRAKRNYLKKKKAAANASVDTADLGVSVEDLPKCDEVSATLLHSLEKELRGHLISESM
ASDCFYVDIGTQTYSFASAPFKTEATLADVIADKPRGLHVRVEVESVTRRHNKTSSAFSN
MCGHFFRRDEYRSHFRNVHCDIQASLSGWFQQRCPLAYLGCAFTQTRFHPAGHRATVRFR
PDVNAFFLHPEVPSFFPEDGENLSPQRSGAHNLDPLSGLPLEILQHIAAYLDSSTLSQLS
QVSHLMREVCATLLLERGMVSLKWKKKTYSHGGSSWKCRKKVWEFSSLFSSVDRWSFSNA
PSMSDHLQRCSFYEREEHTEPVALACMGAVRDKHEEIKCKR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgttgttatcgctgttaactaaccgcagtatggacctggacatttctatgttgtgttac
gtctctcttaaggtgagaagaaagatgcctgtgagccatcatgagcattgcgacaagtgt
tacaacgtccactgccacgtctcggtgcagatctccgtctcatgcctggtcgtcaagtgt
cgtcacaactgtggcgccaccttccacatatgcaagcaggaggagcaccagctcctctgt
cccaatgagatggtcccctgcctcaatgtctactacggctgtcctttcaccatgctccgc
cacaggctggccagacacctggaggtatgtcctgcctgcgtggtctgctgctctcaggag
tggaaccgctggcctgtttcagaaaccgatctggccttctacagaaatgttttggaaaac
cctcaaagtgagggcaacctggatgttgccatggccctcagggaccaagagctgctgttt
cgctccatcaaaatgaagaacatcttcccagagttgatggtgggtgagtctgcccctcag
aattgttctgctgatgtcgacagtaatgcagatgaaccaacctgttcttcagattgcggt
gaatttaatggctgcacgagggtagagggaaaagaactgagccaagagaagagggatgct
ttggcaaagagccgagacgtggatgctattcagaactgtagctcctgggagaaaatattc
aacgaggagatggagggatgcgagcaaaccgtgaacaacttgaacgagaagaaggaaaag
gcaaaggaagagcaagaatcattaaaccgccggggggagacgagagactcccaccgagag
aacgctgctggcgctctgagaagggacggcacaactggccttgctccgtggcaagacggg
gtccttcagaggttgagccagcaagtcaacattgctgagtacaacatgtacctggcccac
aacggggcaatgttgattgattttggccaacttgcagcttgcaccccgagagaaaaggat
tttgtttacgggaatctggagcccatcgaggttcaaaccgtccgctcattcactgctccg
acgagctatcgagcaaagcgcaactacctgaagaaaaagaaggccgcggccaacgccagc
gtcgacaccgcagatttgggtgtttcagtcgaggatctgccgaagtgcgacgaggtcagc
gccacgctcctccactccttggaaaaggaactgagaggacatttaatctcagagagcatg
gcgagcgactgcttttacgttgatataggaacgcaaacatacagcttcgcctcggcgccg
ttcaaaacagaagcaacgctggctgatgtcatcgccgacaaaccccgcggtctccacgtg
cgggtggaagttgagtctgtcaccagaagacacaacaaaacaagttcagcattcagcaac
atgtgtggccacttctttcggagagatgaataccgctctcatttcaggaatgtgcactgt
gacatccaggcctctctgagcggctggttccaacaacgctgccccttggcgtacctcggc
tgcgctttcacccagacgaggtttcaccccgcgggtcatcgggccaccgtcagattccgc
ccagatgtcaacgctttcttccttcatccagaagtcccttcattcttccctgaagacggg
gaaaatctcagccctcagagaagtggcgcacataatctggatcccctgagcggattgcct
ctggagatccttcagcacatcgctgcttaccttgacagctccacattatctcagctgtcc
caagtctcccatctgatgagagaggtgtgtgccacattgttgctggagagagggatggtc
tctctcaagtggaagaaaaagacatattcccatggaggaagctcctggaaatgccgaaag
aaagtttgggagtttagctctctgttttcctctgtggacagatggagcttcagcaacgct
ccttccatgtctgatcacctgcaaagatgctccttctacgagagagaggaacacacagag
ccggtggcgttagcctgcatgggagcggtccgagacaaacatgaagaaataaagtgcaaa
agatag
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