Pseudoliparis swirei (Mariana hadal snailfish): 130210849
Help
Entry
130210849 CDS
T09868
Symbol
slc6a4a
Name
(RefSeq) LOW QUALITY PROTEIN: solute carrier family 6 member 4a
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130210849 (slc6a4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130210849 (slc6a4a)
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
130210849 (slc6a4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
130210849
NCBI-ProteinID:
XP_056297320
LinkDB
All DBs
Position
20:complement(5104303..5119537)
Genome browser
AA seq
665 aa
AA seq
DB search
METKDMMLTSMLTVDNGENEGEKRGGGEEEEEGTQQESGRPMLADGVAKSPAAGAEQRAS
NGFTAPAPQSPREGQGAAACSEGAAASGPGSSAPPPGGLRTLVVQQTSLEKPRETWSKKM
DFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMELALGQFHRSG
CISIWKHICPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLASFRPTLPWTTCSNSWNT
VNCNLYMSTDHNVSWSNSSTSPAEEFYTRQVLQVHLSPGLHQLGSVSWQLALCLLFIFII
VYFSIWKGVKTSGKVVWVTATFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWQKLLSTTV
WIDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSLLSGFVIFTVLGY
MAEMRNQDVATVAKDAGPSLLFIIYAEAIANMPAATFFSIIFFLMIIMLGLDSTFAGLEG
VITAVLDEFPHVLVKRREWFVLGLVCVCFLGSLSTLTYGGAFVVKLFEEYATGSAVITVV
LLEVVAVSWFYGTNRFCNDIHLMLGFYPGYFWRICWVAICPCFLLFIIISFLAFPPEVKL
FNYQYPPWTTALGYCIGVSSFICVPVYMVYHLLRAKGTFKERLLKSITPEPSGEQHRDFI
VTYSV
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaagatatgatgctgacgagcatgttgacggtggacaacggggagaatgag
ggggagaagcggggaggaggagaggaggaggaggaggggacgcagcaggaaagcggccga
ccgatgctggccgatggcgtcgccaagagcccggctgctggcgccgagcagcgggcgtcc
aacggcttcaccgcgcccgcccctcaaagcccccgggagggacagggggccgcggcgtgc
tccgaaggcgcggcggcgtccggccccgggtcctcggcgccgccgccgggaggcctccgg
actctggtggtccaacaaaccagcttggagaagcccagagagacctggagcaagaagatg
gacttcttgctctctgtgatcggctacgccgtggatctggggaacgtctggcgcttcccg
tacatctgctaccaaaacggaggaggtgcctttctgctgccctacctgttgatggccgtg
ttcgggggcgtccctctgttctacatggagctggctctcggccagttccaccgcagcggc
tgcatctccatctggaaacacatctgccccatcttcaaagggatcggcttcgccatctgc
atcatcgccctctacatcgccttctactacaacaccatcatggcgtgggccctgtactac
ctgctggcgtcctttcggcccacgctgccctggaccacctgcagcaacagctggaacacg
gtcaactgcaacctctacatgtccaccgaccacaacgtgtcgtggtccaactcctccacc
tcccccgccgaggagttctatactcgccaggtgttgcaagtccacctctccccaggtctg
caccagctgggctctgtcagctggcagctggccctctgcctgctcttcatcttcatcatc
gtctacttcagcatctggaaaggagtcaagacgtctggaaaggtcgtgtgggtgaccgct
acctttccctacctggtcctcctggtgttgctcgtccgcggggccactctgccgggggcc
tggaggggcgtggtcttctacctcaagcccgactggcagaagctgctgagcacgacggtg
tggatcgatgcagccgctcagatcttcttctcgctgggcccggggttcggcgtgctcctg
gccttcgccagctacaacccgtttcacaacaactgctacaaagatgctttgatcaccagc
tcagtgaactgcctgaccagcttgctgtctggctttgtcatcttcaccgtgctgggctac
atggcggagatgcggaaccaggatgtggcgactgtggcgaaggatgctggtcccagtctg
ctgttcatcatttatgccgaagccatcgccaacatgcctgctgctactttcttttccatc
atcttcttcctcatgatcattatgttgggtctggatagcacgttcgcagggttggagggg
gtgatcacggccgtgctggacgagttccctcacgtcctggtgaagaggcgagagtggttc
gtcttgggcctggtgtgcgtctgcttcctcggctctctctccacgctcacatatggcgga
gcgtttgtggtgaagctgtttgaggagtacgccacgggctccgccgtcatcaccgtggtg
ctgctggaggtcgtcgccgtgtcctggttctacggtaccaaccgtttctgtaacgacatc
cacctcatgctcggcttctacccggggtacttctggaggatctgctgggtggccatctgc
ccctgcttcctgctgttcatcatcatcagttttctggccttcccaccagaggtcaagttg
ttcaactaccagtacccgccatggaccaccgccctgggctactgcatcggggtgtcttcg
ttcatctgcgtgcccgtttatatggtctaccacttgctccgcgccaagggaacgtttaaa
gagcgtctgttaaagagcatcacaccggagcccagcggtgagcagcaccgagacttcatc
gtcacatactcggtctga
DBGET
integrated database retrieval system
