Pseudoliparis swirei (Mariana hadal snailfish): 130210923
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Entry
130210923 CDS
T09868
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130210923 (vps53)
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Others
EARP complex
130210923 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
130210923 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
Laminin_II
Syndetin_C
hAT-like_RNase-H
NBD94
Motif
Other DBs
NCBI-GeneID:
130210923
NCBI-ProteinID:
XP_056297426
LinkDB
All DBs
Position
20:complement(26336662..26370586)
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AA seq
830 aa
AA seq
DB search
MMEEEELEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRSDFNAVEYINTLFPTEQSLAN
IDDVVSKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKFMSIPQIRQLSERVKAAQSELGTQILADFEESFPSQGSKRTGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWSMTERIAVEFCHITRVELSKVMRTRAKEIEVKLLLFAIQRTTNFEVLLAK
RFTGCTLTDTPGQKKPESPLAPTNPFLNDEGGEDVGGDKDEDLAKPRKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKASTEESGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKCSSSSSVGMTISSLLKEKETSE
AAKFTVDELCLVCSILSTAEYCLATTQQLEEKLKEKVDKLLVERINLTGEMDTFSSVISN
SIQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPNIRDNLASTR
KYFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRK
APASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKR
SEQSSMLELFRQRLPTPPSGADGGPSLFSSTPEQESSRIRKLEKLIKKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaggaattagaattcgcggaggacttggaggcgatcctgcacctgacc
ccagaggtgcaactcgccatcgaacaggtgttccccagccaggaccccctggacaggtca
gacttcaatgctgtggagtacatcaacacgctgttccccaccgagcagtctttggcgaac
atcgacgacgtggtgagcaagatccggctgaagatccggcgcctggatgacaacatcaga
actgtcgtgagaggccagaccaacgtgggccaagatggccgacaggcgctggaagaagcc
cagatcgccatccagcagctctttggcaaaatcaaagacatcaaggacaaggcggagaag
tctgaacaaatggtcaaggagatcacacgggacatcaagcagctggaccacgccaagcgc
cacctcaccacctccatcaccaccctcaaccacctgcacatgttggccgggggggtcgac
tccttggaagccatgaccaggaagcggcagtacggggaggtggccaacctgctgcagggg
gtcgtcaacgtgctggagcacttccacaagttcatgagcatcccccagatcagacagctg
tctgagagagtgaaagcagctcagagtgagctggggactcagatcctggccgactttgag
gagtcgttcccctctcagggctcgaagagaacaggtgggcccagcaacgtgctgagagac
gcgtgtctggtggccaacgtgctcgacccgcgcatcaaacaggagattattaagaaattc
atccggcaacacctgtcggagtacctggtgctgttccaggagaaccaagacgttgcctgg
ctggacaagatcgaccggcgctacgcgtggatcaagcgtcagctggtggactacgaggag
aagtacggacgcatgttccccgaggagtggagcatgacggagcgcatcgcggtggagttc
tgccacatcaccagggtggagctctccaaagtgatgcggacgcgggccaaagagatcgag
gtgaagctgctgctgttcgcgattcagaggacgaccaacttcgaggttctgctggccaaa
cgcttcacgggctgcaccctgacggacacgcccgggcagaagaagccagagagcccgctc
gcccccaccaaccccttcctgaatgacgaggggggggaggatgtgggcggagacaaagac
gaggacctggccaagccgaggaagcccaaagctccagacaaccctttccatggcatcgtc
tccaagtgctttgaacctcatctctacgtctacatagaatcccaagacaagaacctgggc
gagctgattgaccgcttcgtggcggacttcaaagcacaaggtccacccaaggcgagcacg
gaggagagcggcgcggtgctgcccagctgcgccgacctgtttgtgtactacaagaagtgc
atggtgcagtgctcccagctgagcaccggagagccgatgatcgccctcaccaccatcttc
cagaagttcctgagggagtacgcgtggaagatcctctctggcaacctgcccaagtgcagc
agcagcagcagcgtggggatgaccatcagcagcctgctgaaggagaaggagacctcggag
gcggccaagttcacggtggacgagctctgtctggtctgcagcatcctgagcacggccgag
tactgcctagcaaccacacagcagttggaggagaagctgaaggaaaaggtggataaactc
ctggtggagagaatcaacctgacgggggagatggacacgttcagcagtgtgatttcaaac
agcatccagctgctggtgcaagacctcgatgctgcctgtgacccggccctcacggccatg
agcaagatgccgtggcagagtgtggagcacgtgggcgaccagagtccctacgtgacgtcc
atcatcatgcacattaagcaaaatgtgccgaacatcagagacaacctggcctccacgcgc
aaatacttcacacagttctgcatcaagttcacaaattctttcattcccaaattcatcaac
cacctgttccgctgtaagccaatcagcatggtgggcgccgagcaactcctactagacact
cactccctgaagacggtgttgctggatctgccctccatcggctcccaggtgctccgcaag
gcccccgccagctacaccaagatcgtggtgaaaggcatgacccgcgcagagatgatcctc
aaggtggtgatggccccgcatgaacccccggtggtgttcgtggataactacatcaagctc
ctggccgacgggaatccggagaccttccagaagattctggacatgaagggcctgaagcgc
agcgagcagagcagcatgctggagctcttccggcagcggctccccacgccgccctccggg
gccgacggcggcccgtctctgttcagcagcaccccggagcaggagtcgtctcgcatccgc
aagctggagaaactcatcaagaagagactgtga
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