Pseudoliparis swirei (Mariana hadal snailfish): 130210940
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Entry
130210940 CDS
T09868
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03272
Virion - Hepatitis viruses
pswi04382
Cornified envelope formation
pswi04514
Cell adhesion molecule (CAM) interaction
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
130210940
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130210940
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130210940
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130210940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130210940
04147 Exosome [BR:
pswi04147
]
130210940
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130210940
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
130210940
Exosomal proteins of colorectal cancer cells
130210940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
MFS_MOT1
DUF973
Amastin
Voltage_CLC
DUF418
DUF1129
Motif
Other DBs
NCBI-GeneID:
130210940
NCBI-ProteinID:
XP_056297455
LinkDB
All DBs
Position
20:complement(12741975..12745679)
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AA seq
343 aa
AA seq
DB search
MGRIGKEVAGQVMSFIGLIGVSVACGIPMWRVTSFVGANIVTGQNIWDGLWMNCVMQSTG
QMQCKLNESLMSLTRDLQAGRALVIISLIFGFIGIMITFIGAKCMGCLDKDSSKAKVVII
GGCFIIVSAVLILIPVCWSAAITIADFQNPLTISSQKRELGASIYIGWASAAVLLIGGIT
LTTSCPPQKNMYGYPGYPPAPMYPYAGPGMNSAPALVVISIIVSAFGVILGIIGGKCTNF
VDNEHSKAKVAITAGIVFICAGVLILVPVCWSANTIIRDFYNPTLIDSQRRELGAALYIG
WGTAGLLILGGALLCSSCPRKDSPEYPVKYAGARSAATSREYV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggggaggattggcaaggaggtggcaggtcaggtcatgagcttcataggcctcattggg
gtctcggtggcctgtgggatccccatgtggagagtgaccagcttcgttggagccaacatc
gtgacgggccagaacatttgggacggcctgtggatgaactgcgtgatgcagagcaccggg
cagatgcagtgcaagctgaacgagtcgttgatgagtctgaccagggacctccaagccggc
cgagcgctggtcattatctcccttatcttcggcttcatcggcatcatgatcaccttcatc
ggagccaagtgcatgggctgcctggacaaggattcctcaaaggccaaggtggtgatcata
ggcggctgtttcatcattgtgtccgccgtcctcatcctgatccccgtctgttggtccgcg
gccatcaccatcgcagacttccagaaccccttgaccattagttcgcagaagagggaactt
ggagcgtccatctacattggctgggcatctgctgctgttcttctgatcggtgggatcacc
ctcaccacgtcctgccctcctcaaaagaacatgtatggatacccaggctacccaccagca
ccgatgtacccttacgcaggcccagggatgaactcggcaccggcccttgtggtcatctcc
atcatcgtctctgcctttggggttatcttgggcattatcggaggcaagtgcaccaacttc
gtggacaacgagcactccaaggccaaagtggccatcaccgctggaattgtcttcatttgc
gccggcgtacttatcctcgtccccgtctgctggtccgccaacaccatcatcagggatttc
tacaaccccaccttgatcgactcccagaggagggagctgggagccgcgctctacatcggc
tggggcacagccgggcttctcatcctgggtggtgccctcctctgcagctcctgcccacgc
aaagacagcccagagtatccagttaagtacgccggcgccaggtctgcagccaccagccga
gaatatgtctga
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integrated database retrieval system
