Pseudoliparis swirei (Mariana hadal snailfish): 130210949
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Entry
130210949 CDS
T09868
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130210949 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130210949 (rsf1a)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
130210949 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
PE-PGRS_C
Motif
Other DBs
NCBI-GeneID:
130210949
NCBI-ProteinID:
XP_056297470
LinkDB
All DBs
Position
20:21236826..21254795
Genome browser
AA seq
1524 aa
AA seq
DB search
MLHSLHSFHSRTVASQQRALPSCFSPPGKMAAPVVARSSGPALCPSFAEVCSFLERFGAV
LGLPEMTFPQMERYLRDTTTVPKPLVDLHVKLLRKLGRSVTTDRWEKYLAKVCQELNSTW
AWELEQKGYQEMSMECKSCILKYLFECQFDDNLKFKMAINEEEPEKMRLQPIGRDQQGLM
YWLQLDQEQNIRLYTEEQDDLDGSTWKCIVRTRNDLAEALELLKSQVEPKEDQEQNQNQA
GSRSTSPKEKDEGDEAIGSTKPSGTAEEHTDCEKFDPVKEEQPLTQVVKLEETPPTKQEN
TEAEVKEEAVNCTSSPPVFDNRVSTIITVIKSESRDADTPTNAVSVVMAPGAAVAKHETN
KEGEAERAVVRSSQQAKMPLKKRELKIAESYHGNHLNNSINSSSIIVCNPSVIKDGGKEG
KLPGSLAPPGGLAAPPPPQQLVVTTSKQELSNGRAFLPMPHKEGQNGVIGVIGQVGVIGH
VGVIRSPPERHSTPSTEQQEQNGPSLDQRDSRAEQEEREVSRQSVLVRKGPVEGEVAAAA
TAPPPPPPPSPAARKLPPPPSLKSDPLPETVGRKVVSVSLSPLSLSLEEPKRQTAGDLGE
KTTEEQSDRGTTTTEQKDGVVDKRRGELSGLSLAEEGVTDDQKENESTLEKSDAESGSTA
PLLKADPQGDGVSGGPAAEMRAKDAGLGSGERKTPLEEASSELQKEGIRLKIKIPPHRRN
KLRGKRGKVEEKEKEKEREQEQEQEQEQDDGRLLRRSTRICRSALPTCKPSSKAAESQRK
KPHKKQALPSRTGEGEEEKEEEEDEEEDDEEEKEKEEGEEDDEEEKEKEEGEEEEEEEQS
STVKKDGKTEPVGQIRKQKGKRRHRRPRWSNIRAKRRKLNEGEEAEGKRGEGESEGGSDS
EESCKLEVIPGEDACSHCGLPNHPELILLCDSCDSGYHTACLRPPLMLIPDGQWFCPPCQ
HKLLCEKLEEQLQNLDSALKKRDRAEKRRERLVYVGISVENIIPEGEEENSAKKKDPKKS
KNLGRRSTRTRKHISYRFDDFDDAIDEAIEEDIRDLCGGAGRGQDIAAILSEEEGKGSQR
PISSQANSARSRKRRRLNDLESDSTAAESEDEFMLSNSSEDEDFAASGPDDDDVEDEDAG
SVESGSRPRRAVRGAPKQKPSKTQRRGRKRPKRRRSSEEEEDTDEEMGSDQFSDMTDSDD
DKKRRGLRRGQRQQVNYRETTESSDNSRASAKKVKVKGRGRPRKEHFSSDYSDASPSSRD
TEDDYEDEKEDGQRRRVNKRRREEEDLRGKRARQKRRRHDEDEDEERERGRRLKRKLQER
EKTDKDKARRLRRTERKEEEEDPEKLGRGKRREMLSLQRRKRLAQMLKKRRPSTDESDES
DESETSSSEEDRPIRKRLNRIDSDDDEDEGEEEEEEKGGGRQKKVTTMKKFSDAQEKGRG
RSLSPSNRHRTSRELATPEAGSPAVHRDSAGSEGQGRHNGSSHEEEEEEEEDEDEEKEKE
KEEKEKEEGGQTDSLNSAQNSPQS
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactccctccattcatttcattcgcgcacagtcgcatcccagcagcgagccctc
ccctcctgtttctctccgcctggaaagatggctgctccggtggtggcgaggagctccggc
ccggcgctctgcccgagcttcgcggaggtctgttcattcctggagcgattcggagcggtg
ctgggtctgccggagatgactttcccgcagatggagcggtatctgcgggacacaacgaca
gttcctaaaccgcttgtggacctccatgtgaagctgctcagaaaactggggaggtctgtg
actactgaccgctgggaaaaatacctggctaaggtttgccaggagttgaacagtacctgg
gcatgggagctggaacagaagggctaccaggagatgtccatggagtgcaagtcatgcatc
ctcaaatatctcttcgagtgtcagttcgatgacaacctgaagttcaagatggcgatcaat
gaggaggagccggagaagatgcgtctgcagcccattggacgggaccagcagggcctgatg
tactggcttcagctggaccaggagcagaacatccggctgtacacggaggagcaggacgat
ctggacggatccacttggaagtgcatcgtcaggactcgtaacgacctggccgaggcgctg
gagctgctgaagtctcaggttgaaccaaaagaggaccaggaacagaaccagaaccaggct
ggttccagaagcaccagccctaaagagaaagatgaaggggatgaggccattggcagcacc
aaaccctccgggactgccgaggaacacacggactgtgagaagttcgaccctgtaaaggag
gagcaacccctgacacaagtggtgaagctggaggagacgccgcccaccaagcaggaaaac
accgaggccgaggtgaaggaagaggcggtcaactgcacgtcgtcgccgcccgtctttgac
aaccgcgtcagcacaatcatcaccgtcatcaagtcggaatccagggacgccgacaccccc
acaaatgctgtgtcggtggtcatggcgccaggcgcggctgtcgcgaagcatgagacgaac
aaggaaggggaggcggagcgggcggtcgtcaggagcagccagcaggccaagatgccactg
aagaagagggagcttaagatcgcggagagctaccacggcaaccatctcaataacagcatc
aacagcagtagcattattgtttgcaacccgtcagtcatcaaggacggcggcaaagagggg
aagttgccgggctcgttggcgccccctggtggcctggctgccccaccaccaccacagcag
ctggtggtcaccacatcgaagcaggaactgagcaacgggagagcgtttctccccatgccg
cacaaagagggacaaaacggagtcataggggtcataggtcaagtcggcgtcataggtcac
gtgggggtcatccgcagcccacccgagcgccacagtacccccagcaccgagcagcaggaa
cagaacgggcccagtttagaccagcgggactccagagctgagcaggaggagagggaggtc
agtcggcagtctgtgttggtaagaaagggacccgttgaaggggaggtggcggcagcagcc
actgctcctcctcctcctcctcctccctctcctgcggccagaaaactaccgccaccgcca
tccttaaaatctgatccgcttcctgaaactgtcgggaggaaagtagtttccgttagcctt
tccccactgtctctgtctctagaggagcccaagagacagacggcaggagacctgggtgaa
aaaacgaccgaggagcagtcggacagggggacgacaacaactgaacagaaggatggcgtt
gtggacaagaggagaggagagctgtctggactttctttggccgaagaaggagttacagat
gaccaaaaagagaatgaaagcactttagaaaagtctgatgccgaatctgggagcaccgct
ccgcttctcaaagcagacccgcagggagacggggtcagcggcgggccggcggccgagatg
agggcaaaggacgctgggcttggatcaggggagcggaagactcccctggaggaagcctcc
tccgagctccagaaagaaggaatccggttgaagatcaagatccccccacaccggagaaac
aagttacgggggaagcggggaaaggtggaggagaaggagaaggagaaggagagggagcag
gagcaggagcaggagcaggagcaggacgacgggaggcttctgaggagatctacaaggatt
tgccgatctgctttgccaacctgcaagccgagctcaaaggcggctgagagccagagaaag
aagccacacaaaaaacaggcactgcctagcagaacgggggagggagaggaggagaaggag
gaagaagaggatgaagaagaggatgatgaggaggagaaggagaaggaggagggagaagag
gatgatgaggaggagaaggagaaggaggagggagaagaagaagaggaagaggagcagagt
tcaaccgtaaagaaagatggcaaaacagaaccagttggacaaataaggaaacaaaagggg
aaacggaggcatcggcgccctcgatggtccaacattcgcgccaagagacgcaaactgaac
gagggagaggaggcggaggggaaacgaggagagggggagagcgagggagggagcgactcc
gaggaatcgtgcaaattggaggtgattcccggcgaggacgcctgcagtcactgtggcctg
cccaaccaccccgaactgatcctgctgtgtgactcctgtgacagcgggtaccacaccgcc
tgtctgcggccgccgctcatgttgattccagatggacagtggttctgtccaccctgccag
cataagctgctgtgtgagaaactggaggagcaactgcagaacctggacagtgctctgaag
aaaagagatcgagcagagaagaggagggagcggctggtgtacgtgggaatcagtgtcgag
aacatcatccctgagggagaagaggagaattctgcgaagaagaaagatcccaaaaagagc
aaaaatctggggaggagatcaaccagaaccaggaagcatatcagctacaggtttgatgac
tttgacgatgccattgatgaggccatagaggaggacatcagggacctctgcggaggagcg
ggacgaggccaagacatcgccgccatcctgtccgaggaagaaggcaaggggagccagcgg
ccaatcagcagccaagccaattctgccaggagcaggaagaggcggcgactgaacgacctg
gagagtgacagcacggcggcagagagtgaggacgagttcatgctcagcaacagctcagag
gatgaagatttcgctgcgtcagggccggacgatgatgacgtggaagacgaggacgcgggc
agcgtggagagcgggtcccgccccagacgggcggtgagaggggcgcccaagcagaaaccc
agcaagacccaacgcaggggcaggaagcggccgaagcggagacgctcctccgaggaagag
gaggacaccgatgaggaaatgggctcggatcagttcagcgacatgaccgacagcgacgac
gacaagaagaggcggggtctgaggcgcggccagcgccagcaggtcaactaccgcgagacg
accgagtcgtcggacaactcccgagcctccgccaaaaaggtcaaggttaaaggccgcggc
agacctcgcaaggagcatttctccagtgactacagcgatgcgtcgccttcttcccgagac
acggaggacgactacgaagatgagaaggaagatgggcagaggagaagagtgaacaagagg
aggagagaggaggaagacctccggggaaagagggcaaggcaaaagcggaggagacacgat
gaggacgaggacgaggagcgtgagagagggaggcgactgaaaaggaagctccaagagcgg
gagaagacggacaaagacaaagcgaggcggttgaggaggacagagagaaaggaggaggag
gaggacccagagaagctgggccgggggaagaggagagagatgctatcgctgcagcgacgc
aagcggctcgctcagatgctgaaaaagaggcggccttcgacggacgagtcggacgagtcg
gacgagtctgagacgtcgtcgtcggaagaggatcgtccaatccgcaaaagactcaaccgc
atcgactctgatgacgacgaagacgaaggcgaggaggaggaggaggagaagggagggggg
agacagaagaaggtgacgacgatgaagaagttcagcgacgctcaggaaaaggggaggggc
cggagcctgtctccgtcaaacaggcatcggacctccagggaactggcgacgcctgaggcc
gggagtcctgctgttcacagggacagtgcgggatcagaagggcagggcaggcacaacggc
tcctcacatgaggaggaggaggaggaggaggaggatgaggatgaagaaaaggaaaaggag
aaggaggagaaggagaaggaggaggggggccagacagactcattaaactctgcccagaac
agtccgcagtcgtga
DBGET
integrated database retrieval system
