Pseudoliparis swirei (Mariana hadal snailfish): 130210996
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Entry
130210996 CDS
T09868
Symbol
mcamb
Name
(RefSeq) melanoma cell adhesion molecule b isoform X1
KO
K06534
melanoma cell adhesion molecule
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130210996 (mcamb)
04515 Cell adhesion molecules [BR:
pswi04515
]
130210996 (mcamb)
04090 CD molecules [BR:
pswi04090
]
130210996 (mcamb)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of melanoma cells
130210996 (mcamb)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
MCAM
130210996 (mcamb)
CD molecules [BR:
pswi04090
]
Proteins
130210996 (mcamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
I-set
V-set
ig
C2-set_3
C1-set
Ig_4
EVI2A
GldM_2nd
CD34_antigen
DUF3377
TMEM154
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
130210996
NCBI-ProteinID:
XP_056297546
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All DBs
Position
20:complement(25349578..25388177)
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AA seq
630 aa
AA seq
DB search
MARNNACCLLVGLLALFHTWGATADVEVNMMDRVEAFRGEAVSISCMFTSSEGVGGIMIQ
WFYVTLSGEKQKIYYQDATMKVVDKGTQFTDRISVSGTGGTGEVVLTISDVELRDEVEFI
CLIKGLTEGTGEGRTKLRVFVSPELPNIEGVQTGISVNQDGPSKIGTCEVKNGYPRPNIT
WYRNNTPLRGNHDVVKVLPSITTESSGLFSVKSELRMKVVKEDKDDLFYCEVKYFVPGAE
IMTETNTINITVYYPSTAVSVWVESPKGNIKEGDSIELQCRGNGNMPSSILSITHKSVNL
PLSNNVLLLDNVTRLHGGVYECTSTDTDTFEELSGNTSVSVHYLDPAVVMPEDAVVAQGE
EITATCNALSSLKTRTSWMKNGKEVSKAHTLVLKDATFDSAGMYVCVVNVLDIEGMETSG
TLNVKVEGAPKITTPLDTEIEESYKSTVHLSCSVRGFPTPTVTWTTSDGKILNSTSETEN
EGEVQSSVSVTVTGDMAASCNASNKFGADSATFNIKATIHTTTPATTTTSTPITSSTVKS
QSEISAEAVKKESKGVIIAVIIVCILLLAILGSVLYFLYKKGKICGRSGKQDLTKEKSGR
DNIVVEMKSDNTEEAVLLGVNGEKQPLGNQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcacggaacaatgcctgctgtctactcgtcggacttctggccctctttcacacctgg
ggagcgacggccgacgtggaggtgaacatgatggaccgggtggaggcgttcaggggagaa
gcggtttccatcagctgcatgttcacgtcgtccgaaggcgtcggtggcataatgatccag
tggttctatgtgacgttgtcgggcgagaagcagaagatctactaccaggacgccaccatg
aaggtggtggacaaaggcacgcagttcaccgaccggatcagcgtgagcggcaccggcggc
accggagaggtcgtgttgaccatcagcgacgtggagctgagagacgaggtggagttcatc
tgtctcatcaaagggctcacggaggggaccggggagggacgcaccaagctcagagtgttc
gtgtcaccggaacttcccaacattgagggagtccaaacggggatctcagtcaaccaagac
ggcccatccaagattgggacctgcgaggtcaaaaatggctaccccaggccgaacatcacc
tggtacagaaacaacaccccgctgcgcggcaatcacgatgtggtgaaggtgttgcccagc
atcaccaccgaatccagcggtctgttctccgtcaagagcgagctgcgcatgaaggtggtg
aaggaggacaaagacgatctgttctactgcgaggtcaagtactttgttcccggagccgaa
ataatgaccgagaccaacactattaacatcactgtgtactacccctccacggcggtgagt
gtatgggtggagtcgccgaagggaaacatcaaggaaggcgactcaatcgagctgcaatgt
cgcggcaacgggaatatgccttcttcaatcttatccatcacgcacaaaagcgttaacttg
cctctatccaacaacgtgctgctgctggacaacgtgacccgtctccacggcggagtttac
gaatgcacctcgacggacacggacaccttcgaggagctctcgggaaacaccagcgtgtcg
gtccactatctggatcctgccgtcgtgatgcccgaagacgccgtggtggcccaaggagag
gagatcacggccacctgcaacgccctctcttctctgaagacacgcacatcctggatgaag
aatggaaaagaagtttcaaaggcccacactctggtcctgaaggacgctacgttcgactcg
gccgggatgtacgtgtgcgtggtcaatgtgctggacatcgaagggatggaaaccagcggg
acactgaatgtcaaagtcgagggcgcgccgaagattacgacgccactcgacaccgagata
gaggagagttacaagagcacggtccacctgagctgcagcgtcaggggattcccgactccc
accgttacctggaccacctccgatggaaagatcctcaattcgacatcagaaacggagaac
gagggcgaagtccagagcagcgtcagcgtcacggtcaccggcgacatggcggcgtcctgc
aacgcctccaacaagttcggcgccgactcggcgaccttcaacatcaaagccacaatacac
accaccacaccagccaccactactaccagtactcccattacctccagcacagtcaaatca
caaagtgaaatctcagcagaggcagtcaagaaagagagcaaaggcgtcatcatcgccgtc
atcatcgtctgcatcctgctgctcgccatcttgggcagcgtgctctacttcctgtacaaa
aagggaaagatctgtgggcggtccggcaagcaagacctcacgaaggagaagtcgggcaga
gacaacatcgtggtggagatgaagagcgacaacaccgaggaggccgttctgctcggggtc
aacggggagaagcaacctctcggcaaccagtga
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