Pseudoliparis swirei (Mariana hadal snailfish): 130211020
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Entry
130211020 CDS
T09868
Symbol
nectin3a
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130211020 (nectin3a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130211020 (nectin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130211020 (nectin3a)
04090 CD molecules [BR:
pswi04090
]
130211020 (nectin3a)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
Nectin family
130211020 (nectin3a)
CD molecules [BR:
pswi04090
]
Proteins
130211020 (nectin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
C2-set_2
ig
I-set
Ig_2
TIG
Insulin_TMD
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
130211020
NCBI-ProteinID:
XP_056297578
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All DBs
Position
20:complement(17213673..17245035)
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AA seq
553 aa
AA seq
DB search
MEKRALFRRTSPSNGLRLVTSLLTFYGFASGVSSNQVIVPEKVNAVLGKNITLGCRIEVG
SNLTQSSWERRLPSGTITLAVFNPEFGTSFSPDYIKRISFVSPSVRDATITIEGAGFADV
GSYTCKVVTFPLGNTQASTYVNVLVEPKVYVSAGPMALLDGGNESLVATCIAERGRPAAE
VFWETELYGRSEKQSQDEPNGTTSVHVHYMWQPQSYALGKKLTCVVRHPTLLTEFRIPYI
LNVQFAPVVSILGIDKNWFVGQENVKFNCGAKANPPARHFTWTRLDGLMPEGVEQSNNSF
AFTRPLERNDSGVYRCEVINDIGLRTQDVNLWVQDPPPTTAAPSTTASVLRDTSGPGTAA
DQQRGALFTSPTLASVHDGSLGTIVGGVVGGVLFLILLLVLGGACFMRQRRTFRGDYYTK
QYLGPSDMQKESQLDVLQPHELQEVYGDKTSKGSQELKPKLGGDIIYPDYTPDHKERDDW
ADKGDAHRGLKEGNYYPDNYNTQNVHPCGPPVHSPAVNNGSPCLPEDCYDNGTDGDYVSH
MDGSVISRREWYV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacgagcactcttcaggaggacttcgccatctaacggactgcgactagtcacc
tcactcctcaccttttacggatttgcttcaggtgtgagcagcaaccaggtgattgttcct
gagaaagtgaatgcagtgctggggaagaacatcacactgggctgcagaatagaggtgggc
tccaacctgacacagagctcctgggaacggcgtcttccttcaggcaccatcaccttggca
gtgttcaaccccgagttcgggacctccttctctccggactacatcaagcgcatctcgttt
gtttccccttctgtacgagacgctaccattaccattgaaggggctggctttgcagatgtc
gggtcctacacctgcaaagtggtaacatttcctctgggcaatacacaagcatcaacctat
gttaatgtgttagtggagccaaaggtctatgtgtccgccggccccatggctctgctggat
ggtgggaacgagtcactggtggcgacctgcatcgccgagcggggccgtcccgccgcggag
gttttctgggagacggagctgtatggacggagtgagaagcaaagtcaggacgagcccaac
ggcaccacctctgtacacgtgcactacatgtggcaaccgcagagctacgccctggggaag
aagctcacctgtgtggtgcgccacccgaccctgcttacagagttccgcataccgtacata
ctaaacgttcagtttgcaccagtggtatcgattttgggaattgacaaaaattggttcgtg
ggtcaagagaatgtaaagttcaactgtggcgccaaagccaacccgcctgctcgccacttc
acatggaccaggttggatggattgatgcccgagggtgttgagcaatcaaacaatagcttt
gctttcactcgcccgttggagcgcaacgactctggagtgtaccgctgcgaagtgataaac
gacattggtctccgcactcaagacgtaaacctctgggtacaagatcctcccccgaccacg
gccgccccgagcaccactgcatccgtcctccgcgacacctctggcccgggcaccgctgcg
gaccagcagagaggagccctgttcacatccccgaccctggcctccgtgcacgacggcagc
ctgggtaccatagtcggtggggttgtgggcggagttttattcctgatcctcttgctggtc
ctcggcggggcctgcttcatgcgacagcgcaggaccttcaggggggactactacaccaaa
cagtacctgggaccctccgacatgcagaaggagtctcagctggacgtgctgcagccgcat
gagctgcaggaggtctacggggacaagacgagcaagggcagccaggagctgaaacccaaa
ctgggcggagacatcatctaccccgactacacccctgaccacaaggagagggatgactgg
gctgacaagggggacgcccacaggggcctcaaggagggaaactactacccagataactac
aacacccagaacgtgcacccctgcgggcctcctgttcacagccccgccgtgaacaacggc
tccccctgcctcccggaggactgctatgacaatggtacagacggcgactacgtctcccac
atggacggatctgtgatctcacgcagggagtggtatgtttga
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