Pseudoliparis swirei (Mariana hadal snailfish): 130211043
Help
Entry
130211043 CDS
T09868
Symbol
prdm10
Name
(RefSeq) PR domain zinc finger protein 10 isoform X1
KO
K24643
PR domain zinc finger protein 10 [EC:2.1.1.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130211043 (prdm10)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130211043 (prdm10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
PRDM2_PR
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_2
zf-Di19
zf-met
Zf-C2H2_ZNF451
SET
Zn_ribbon_PRDM4
zf-C2H2_7th_ZNF462
zf-C2H2_6
zf-C2H2_STOP2_C
DUF629
TerY_C
Motif
Other DBs
NCBI-GeneID:
130211043
NCBI-ProteinID:
XP_056297611
LinkDB
All DBs
Position
20:13250507..13262793
Genome browser
AA seq
1163 aa
AA seq
DB search
METKQESSAVWSQTSGTQVHFEGGTVAQIVYSDDQMDQAQQQVVYTADGNSYTSVESAEH
TLVYIHPADGTQTLFADQPQVAYIQQDGTTQQVTVLLPSGQNINAANLHVLSNVAEAPQA
ILEPVSQEQLSVSNSLSSMADVADPPFSPLGATDSTDDSDEDEDEDSEMDDWEPRLPQSF
NPHSLWCDECSIANPSVCPLHGPLHPVPNRPVMSKARASLPLVLYIDRFLGGVFTKRRIP
KRTQFGPVEGPLASQGELQDHFIHLKLCMLDAEKDGEKSDDMWLNLSDEDGCNWMMFVRP
AQNHLEQNLVAYQYGSEIFYTSIKNIQPKQELKVWYAASYAEFVNQKIHNVTEEERKVLR
EQEKNWPCYECNRRFVSSEQLQQHLNMHDDKLNSVTRSRGRGRGRGRKRFGTGRRPGRPP
KCIRLDPPVDTGGEKTTEMLELTEPLEERIEGAQNGLKVVEMESEAAPGTKAEGQLIPPA
EEPVSESCTLPSDTYLPVPLKEDQGQSSQSDAHLTTQDMRRAKRIRNAALQHLFIRKSFR
PFKCTHCGKAFRDKDKLEQHLRVHGRDAYAFSCHICSKSFTSDSALEDHLLVHTENRSYS
CLLCPDTFERLDLLKDHVGVHAVNGCFTCPSCKKTFTDFIQVKKHIRCFHSEKVFQCPDC
EKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPDREAKKADRIHR
SKTLKLKVPTTDFESFMFKCRVCMMGFRRRGMLVNHLSKRHPEMRIDDVPELTLPIIKPN
RDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAAPGEPDPMLSTHTQLTGTI
ATAPVCCPHCAKQYSSKTKMVQHIRKKHPEFAQLVNTIQAPLTTAVISSVPAVISADGTT
AEAIVTTDLLTQAMTELSQTLTTDYRTAQGDYQRIQYIPVSQAGGNLSQPQHIQLQVVQV
APASPPHSQHATVDVSQLHDPHGYSQHSIQVQHIQVNEASGTGQGASQVTGQPLSPTSQQ
PSQELSPTQLTPVPLAESHTLQASSTQQQQQGTVQHAYIPGNWNYRGYSSEIQMMALPHT
QYVIAEASTPVSGVNSNPVKTTHYVISEGQTELETKQTAPQSTTQGQVEHLEQQPANQQA
TTQYIITTTTNGSGTSEVHITKP
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaacaggaatcatcggctgtgtggagtcagacttctggcacacaggtgcat
tttgaaggcggcacagtggcccagatcgtgtacagtgacgatcagatggaccaggcacag
cagcaggtggtttatacagcagacgggaactcctatacctctgtagagtctgcagagcac
acactggtttacatacaccctgcagatggcactcagactctatttgctgaccagccacaa
gtggcttacattcagcaggatggtacaacgcaacaggtcacagttttgctgcccagtgga
cagaacataaatgcagccaatctgcatgttctcagtaatgtagccgaggctccccaagct
atcctggagccagtttcccaggagcagctgtcggtgtccaattcgctctcctccatggcg
gacgttgcggaccccccctttagtcccctcggggccacagactccacagatgattctgat
gaagatgaggatgaagactctgagatggatgactgggaacctcgtctgcctcaatcattc
aaccctcacagcctctggtgtgacgagtgtagtattgccaacccctctgtgtgccctctg
cacggccctctgcaccccgtccccaaccggcctgtgatgtccaaggcccgggccagtttg
cctctggtcctctacattgatcgcttcctgggcggagtgttcaccaagaggcgcatcccg
aagcgcacacagtttggtcctgtggagggacccctggcttctcagggtgaactgcaggac
cacttcattcatctcaaactgtgcatgctggatgcagagaaagatggagagaagtctgat
gacatgtggttgaacctttctgatgaagacggctgtaactggatgatgtttgtgagacct
gctcagaaccacctggagcagaacctggtggcctaccagtacggctcggagatcttttac
acatccatcaaaaacatccaacccaaacaagagctcaaggtgtggtatgcggcatcgtat
gcagagtttgtcaaccagaagatccacaatgttacagaagaagagagaaaagtgctccgg
gagcaagagaagaactggccttgttatgagtgtaaccgccgcttcgtgagctctgaacaa
ctgcagcaacatctcaacatgcatgatgacaaattaaactctgttactagatccagaggc
cggggtcgaggaagaggcaggaagagatttgggacaggaagaagaccgggacgcccacca
aaatgtatacgtcttgatccaccagttgacactggtggggaaaagacaacggagatgctg
gaattgacagagcctctggaggagcgaatcgagggagctcagaacgggttgaaggtggtg
gagatggagtcggaggcagcgccggggactaaggcagagggacagcttatcccccccgca
gaggagccggtttcagagtcctgcaccctgccctccgacacgtacttgcctgttccacta
aaagaggatcaaggacagagcagccaatcggacgcccacctcacaactcaggacatgcgg
cgtgccaagaggatacggaatgcggcactgcagcaccttttcattaggaagagtttccgt
ccgtttaaatgcacccactgtggaaaggccttccgggacaaagacaagctggagcagcac
ctgcgggtccacggccgggacgcctacgctttttcctgccacatttgcagcaagagcttc
acgagtgactcggccctggaggaccatctgctggtgcacacggaaaaccgctcctactct
tgtctcctatgcccggatacctttgagaggctggacctgctcaaagaccacgtcggggtg
catgctgtgaacggctgcttcacctgtccttcctgcaagaagacgtttactgacttcatc
caggtgaagaagcatatccgctgcttccattcagagaaggtctttcagtgcccagattgt
gaaaaggctttctgccggccggacaagctccgtttgcacatgttacgccactctgaccgc
aaggacttcttgtgctcaacatgtggcaaacaattcaagagaaaagataagctgagggag
cacatgcaacgcatgcacaatcccgacagagaggccaagaaggcagaccgaatccaccgc
tccaaaaccctcaaactgaaggtgcccaccacagacttcgagagcttcatgttcaaatgc
agagtgtgcatgatgggattcagacgcagaggaatgctggtcaatcatttgtctaagcgt
cacccggagatgcgtatcgatgacgtgcctgagctcacgctgcccattatcaagcccaat
agggactacttctgccagtattgtgacaaggtgtataagagtgccagtaagaggaaagca
cacatactgaagaaccaccccggggcagaactgcctcccagcatccggaagttgcgtccg
gctgctcctggtgaaccagaccccatgttgagcacacacacacagctgactggcaccatc
gccactgcaccggtctgttgcccacactgtgccaaacagtacagcagcaagactaagatg
gttcagcacatcaggaagaagcatccagagtttgcccaactcgtcaacaccatccaggct
cctctgaccacggctgtcatcagcagtgtacctgccgtcatcagtgcagacggtaccaca
gctgaggctatcgtgaccacagatttgctgacccaggcaatgactgagctttctcaaacg
ttgaccacagactaccgcacggcgcagggagactaccagaggatccagtacatcccagtg
tctcaggcaggaggcaacctgtcccagccgcaacacattcagctgcaggtggtgcaggtg
gctccagcttcccccccacattcccaacatgcgacagtcgatgtgagccagctgcatgac
cctcatggctacagccagcactccatccaggtacaacacatccaggtcaacgaggcctca
ggcactggacaaggagccagccaggtcaccggtcagcctctaagccccacctcccagcag
cccagtcaggagctgagtcccacccagctgacccctgtgcccttagctgagagccacacc
ctgcaggccagcagcacccagcagcagcagcaggggactgtgcagcatgcctacatcccg
gggaactggaactaccgaggttactcgtctgagatccagatgatggctctacctcacacg
caatatgtgatcgctgaggccagcactcctgtatctggagtcaacagcaacccggtgaaa
acgacccactacgttatttccgagggtcagactgagctggagactaaacagactgctcct
cagagtacaacccagggccaagtggaacatctggagcagcaaccggccaatcagcaagcc
accactcagtacatcatcaccacaaccaccaatggcagcggcacgagtgaagtccacatc
acaaaaccctga
DBGET
integrated database retrieval system
