Pseudoliparis swirei (Mariana hadal snailfish): 130211097
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Entry
130211097 CDS
T09868
Symbol
fzd4
Name
(RefSeq) frizzled-4
KO
K02354
frizzled 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04150
mTOR signaling pathway
pswi04310
Wnt signaling pathway
pswi04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130211097 (fzd4)
04150 mTOR signaling pathway
130211097 (fzd4)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
130211097 (fzd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pswi04030
]
130211097 (fzd4)
04090 CD molecules [BR:
pswi04090
]
130211097 (fzd4)
G protein-coupled receptors [BR:
pswi04030
]
Frizzled / Smoothened family
130211097 (fzd4)
CD molecules [BR:
pswi04090
]
Proteins
130211097 (fzd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
130211097
NCBI-ProteinID:
XP_056297695
LinkDB
All DBs
Position
20:27862068..27876077
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AA seq
535 aa
AA seq
DB search
MPGIRRPLSGAALLLLLAALRGARAFGDEPEEPSCDPIRIALCRGLGYNVTRMPNLVGNV
LQADAELQLTTFTPLIQYGCSSQLKFFLCSVYVPMCTDKVPIPIGPCGSMCLSVKRKCLP
VLHEFGFIWPEVLNCSHFPPQNDHNHMCMEGPGDEDPPHPPNRHPPHHQEDCQALGSAPD
QYTWLKPAESCALQCGYDSGLYRRGAKVFADAWMAAWAALCFLSTTLTVLTFLLDSQRFS
YPERPIIFLSMCCNLYSVAYLVRLTLGRERVSCDLDATAVPILVQEGLKSTGCAIVFLLL
YFFGMASSLWWVILTLTWFLAAGLKWGHEAIEMHSSYFHIAAWAIPAVKTIVILIMRLVD
ADDLTGLCYVGNQQQEALTGFVVAPLATYLLIGTLFIGAGLVALFKIRSNLQKDGAKTDK
LERLMVKIGVFSVLYTVPASAVIGCYLYQLSHWGEFRAAPRDSYVASEMLRIFMSLLVGI
TSGMWIWSAKTLHTWRRCTARLLWDGGAGRGGKRAPGGEGWIKPAGGGKGNETVV
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggatccggcggccgctcagcggggccgcgctgctgctgctgctggcggcgctg
cgcggcgcgcgcgcgttcggggacgagcccgaggagccgagctgcgacccgatccgcatc
gcgctgtgccgcgggctcggatacaatgtgacccggatgcccaacctggtgggcaacgtg
ctgcaggccgacgcggagctgcagctcaccaccttcaccccgctcatccagtacggctgc
tccagccagctgaagttcttcctgtgctccgtctacgtgcccatgtgcaccgacaaggtt
ccaatccccatcggcccgtgtggcagcatgtgcctgtccgtcaagaggaagtgcctcccg
gtgctccacgagttcggcttcatctggcccgaggtgctcaactgcagccacttcccacct
caaaacgaccacaaccacatgtgcatggagggccccggggacgaggacccgccccacccg
cccaaccgccacccgccccaccaccaggaggactgccaggcgctaggctccgcccccgac
cagtacacctggctgaagccggcggagagctgcgcgctgcagtgcggctacgacagcggc
ctctaccggcgcggcgccaaggtgttcgccgacgcgtggatggcggcgtgggccgcgctc
tgcttcctgtccaccacgctcaccgtgctcaccttcctgctcgactcgcagcgcttctcg
taccccgagcggccgatcatcttcctgtccatgtgctgcaacctgtacagcgtggcctac
ctggtgcggctgactctgggccgggagcgcgtgtcatgtgacctggacgccaccgccgtg
cccatcctggtccaggagggactgaagagcaccggctgcgccatcgtcttcctcctgctc
tacttctttggcatggcgtcctcgctctggtgggtgatcctgaccctcacctggttcctg
gctgccgggctcaagtggggccacgaggccatcgagatgcacagctcgtacttccacatc
gcggcgtgggccatcccggccgtgaagaccatcgtcatcctcatcatgcggctggtggac
gccgacgacctcaccggcctctgctacgtcggcaaccagcagcaggaggcgctcacgggc
ttcgtggtggcgccgctcgccacctacctgctcataggcaccctcttcatcggcgccggc
ctcgtggctctcttcaagatccggtccaacctgcagaaggacggcgccaagacggacaag
ctggagcgcctgatggtgaagatcggcgtgttctcggtgctctacaccgtgccggcgtcc
gccgtcatcggctgctacctgtaccagctgagccactggggcgagttccgggccgcgccc
cgggactcgtacgtggcgtcggagatgctccggatcttcatgtccttgctcgtgggcatc
acgtcggggatgtggatctggtccgccaagacgctgcacacctggcggcgctgcaccgcg
cgcctgctctgggacgggggggcgggccgggggggcaagagggcgccgggcggcgagggc
tggatcaaaccggcggggggggggaagggcaacgagacggtggtgtga
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