Pseudoliparis swirei (Mariana hadal snailfish): 130211100
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Entry
130211100 CDS
T09868
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130211100 (irf2bp1)
04121 Ubiquitin system [BR:
pswi04121
]
130211100 (irf2bp1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130211100 (irf2bp1)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Atypical E3
130211100 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
130211100
NCBI-ProteinID:
XP_056297696
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All DBs
Position
20:complement(12123953..12126861)
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AA seq
430 aa
AA seq
DB search
MSSPSSSRRQWCYLCDLPKMPWTVVWDFSEVVCRGCVNYEGANQIEFLIASTRQLKRTHG
LQDGNVLSPGPSPNKHGTSGRGEAAGDVGRPHVDRFERGGRGEAVSAIRVPPNGLHRDGP
PPQEANRQSPGGSRRPMLGAAIPPSLVTQNIAGIPHGLLAGMPAGLTARTAPMSSPMIFP
GPVLADMSRRQLGMGLGIAPFITPELERELSSSQNQAKLQSQMHTSVSGSSASKGAAGMS
SSSSTLAGGVSQTSPKPASSPARQPRPLASRSGGESLGSSTSAEAATTAATLPHSGASEL
GSASVNNTHSTGNTLSCTLCQERLEDTHFVQCPSVPGHRFCFPCTRVYIQGRRGDGEVYC
PSGERCPLDISPNSPPWAFMQGEVSTILGTAGAGAPSAAAPGAGNEAGAAGGAAGAAAGG
DVTVKKERES
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccccctcctcctccaggcgccagtggtgctacctgtgcgacctgccaaagatg
ccgtggactgtcgtgtgggacttcagcgaggtggtgtgccggggctgcgtcaactacgag
ggagcgaaccagatcgagttcctgatagcgagcacccgacagctgaagcggactcacggg
ctgcaggacgggaacgtcctgtcaccgggtccctcgcccaataaacacggcacatctggc
agaggagaggctgctggggacgtgggccggccgcacgtcgaccgcttcgagaggggagga
agaggagaggccgtgtcggctatccgtgtgccgcccaacgggctgcaccgggacggcccg
ccgccccaagaggcgaaccggcagagccccggcggcagccggaggccgatgctgggtgct
gcgatccctcctagtctggtcactcagaacattgcgggtattccacatgggctacttgcg
ggcatgccggcgggcctgacggccaggacagcccccatgagcagccccatgatcttcccc
ggcccggtgctggccgacatgagccgcaggcagctggggatggggttggggatcgcccct
ttcatcacaccggagctggaacgagagctcagctcgtcccagaaccaggccaagttacag
agccagatgcacacctctgtgtctggcagcagcgccagcaagggtgcagccggcatgtct
tcatcttcctccaccctggctggaggtgtgagccagaccagtcccaagcccgcctcgtcc
ccggccaggcagccgcgccccctcgcctcgaggtccggaggggagtccctgggatccagc
acctcggcggaggccgccaccacagctgccacgctgccccacagcggggcctccgagctg
gggtcagcgtccgtcaacaacacccactcaaccggcaacactctgtcctgcaccttgtgt
caggagaggctggaagacacacactttgtccagtgtccatccgtgccagggcataggttc
tgcttcccctgcaccagagtgtacattcagggccggcggggcgatggggaggtgtactgc
cccagcggagagcgatgtccgttagacatctctcccaacagtcccccttgggccttcatg
cagggagaggtctccaccattctgggcactgctggagcaggagctccatcagccgctgca
cctggagcagggaatgaagctggagccgccggcggagccgccggggccgccgccggcgga
gacgtcaccgtcaagaaagagagagagtcgtga
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