Pseudoliparis swirei (Mariana hadal snailfish): 130211118
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Entry
130211118 CDS
T09868
Symbol
capn5a
Name
(RefSeq) calpain-5a
KO
K08574
calpain-5 [EC:3.4.22.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130211118 (capn5a)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C2: calpain family
130211118 (capn5a)
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GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
C2
Motif
Other DBs
NCBI-GeneID:
130211118
NCBI-ProteinID:
XP_056297720
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Position
20:complement(21412780..21427151)
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AA seq
637 aa
AA seq
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MVVPYEGQSFSALRRQCQQNGSLFEDPLFPTSDQSLFYQSNRIGSVTWKRPKELCGNPHL
FVDGISAHDLHQGQLGNCWFVAACSSLASREALWQKVIPDWKDQEWDEEKPESYAGIFHF
RFWRFGEWVDVVIDDRLPTANGELVYCHSNDSNEFWSALVEKAYAKMCGCYEALDGGNTA
DALVDFTGGVSEPMDLMENGFKDDDEKRNELFERVLKVHDRGGLISCSIRATTAADMEAR
LSCGLVKGHAYAVTDVRRVRLGHGLMAYFRSDKLTMIRMRNPWGEKEWNGAWSDSSEEWK
KVSKSERETIGVTVRDDGEFWMTFDDFIVNFTDLILCRLINTSYLSFHKTWEESVMRGSW
QRHDEPLLNRAGGCTNQKHSFLQNPQYVFDVKKPEDEVLICLQQKDRRATLREGRGENLA
IGFEIHRVEFNRTYRMHVTQQKVGGSVFINSRSVFIRIELTEGRYVIIPTTFDPDLEGVF
LLRTFTDVPSDCKELTLHEPPQTCWSGLCGYPSLVTQIHVLNANGLAGQDSDGVSDPYVL
IRCEGEKVRSPVHKNTRSPNFDTKGLFYRKKANQPIRIEIYNHNVLMDSFLGQVTLPAEQ
GEFHQTLHLRDKGDRRDNDLPGTLTVTIVTSAVLTNI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggtggttccatacgagggccagtctttctctgccctgaggaggcagtgtcagcaaaat
ggaagtctgtttgaagaccccctgttccccacatccgaccagtctctgttctaccagagc
aaccgcatcggcagtgtcacctggaaaaggccgaaggagttatgcggcaacccccatctg
tttgtggacggcatcagtgcccatgacctgcaccagggccagctgggaaactgctggttc
gtagccgcctgctccagtctggcctccagggaggcgctatggcagaaggtgatccctgac
tggaaggaccaggagtgggatgaggaaaaaccggaatcctacgccgggatcttccacttc
cgattctggcggtttggtgagtgggtggacgtggtgatcgacgaccggctgcccacggcg
aacggggagctggtgtactgccactccaacgacagcaacgagttctggagcgcgctggtg
gagaaggcctacgccaagatgtgcggatgctacgaggcgcttgacgggggcaacacggcc
gacgctctcgtagatttcaccggcggcgtttccgagccgatggacttgatggagaacggc
ttcaaagacgacgacgagaaacgcaatgagctgtttgagagagtcctgaaggtccacgac
agagggggactcatcagctgctcgatccgggcgaccactgcggccgacatggaggccagg
ctgtcctgcggcctggtgaagggccacgcctacgcggtgacagacgtccgcagggtgagg
ctgggccacggcttgatggcctacttccggtctgataaactcaccatgatccgcatgaga
aacccctggggagagaaagagtggaacggggcctggagcgacagctctgaagagtggaag
aaggtcagtaagagtgagagggagacgatcggtgtcaccgtgcgggatgatggagagttc
tggatgacgtttgacgacttcatcgtcaacttcacggacctcatcctgtgtcgcctcatc
aacacatcctacctgagcttccataagacctgggaggagtccgtgatgcggggctcctgg
cagcgccatgacgagccgcttctcaaccgagccggaggctgcaccaaccaaaagcactcc
ttcctccagaacccacagtacgtgtttgacgtgaagaagccggaggacgaggttctgatc
tgtctgcagcagaaagaccgcagagccacactgagagagggacgaggagaaaacctggct
attggctttgagattcacagggtggagttcaacagaacctaccgtatgcacgtcacccag
cagaaggttggcgggagcgtcttcatcaactcgaggtctgtgtttatacgcattgagctg
acggaggggcggtacgtcatcatacccacgacctttgaccctgacctggagggagtcttc
ctgctccgcaccttcactgacgtgccgtccgactgcaaggagttgactctacatgaacct
ccacagacctgctggtccgggttgtgtggttatccctctctggtcactcagatccatgta
ctgaatgcgaatggactcgcaggacaagactctgatggagtgtcggacccctatgtgtta
attcgttgtgaaggagagaaggttcgctcaccagtccataaaaacacacgcagccccaac
ttcgacaccaaaggactcttctacaggaagaaagccaaccagccaatcagaattgagatc
tacaaccacaacgtgttgatggactccttcctgggtcaggtgactcttcccgccgagcag
ggcgaattccaccagacgctccacctgagggacaagggcgatcgccgtgacaacgacctg
ccgggaacactcaccgtcacaatagtgaccagcgcggtgctcaccaacatctga
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