Pseudoliparis swirei (Mariana hadal snailfish): 130211123
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Entry
130211123 CDS
T09868
Symbol
pax3b
Name
(RefSeq) paired box protein Pax-3b isoform X1
KO
K09381
paired box protein 3/7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130211123 (pax3b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130211123 (pax3b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
130211123
NCBI-ProteinID:
XP_056297733
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Position
20:2874937..2902686
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AA seq
490 aa
AA seq
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MTALAGSIPMMMRPTLAQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQGTMPDIEKRIEE
YKREHPGMFSWEIRDKLLKDGICDRNSVPSVSSISRTMRSKFGGRGDEEEDEEELERKES
EENDRRAKHSIEGILGDRSSHSDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGASQLMAFNHLIPGGFPPSAM
SGIAPYQLSDSPYPSSIAQVSEAPSTLHRPQPLPPSSGHQAGGGGQVEGGSAYCLASGRH
SFSGYSDGFVGAGGAANAMNPALGNGLSPQVMGLLNPGGVPHQPQSDYALSPLTGGLEPP
AGCSQRLDHLKGLEGLGSVPSMAALPSLPGSQSYCPASYSSPGYTVDHVASYQYGQYGQS
AISYLRPEIT
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttggcggggtcgatacccatgatgatgcgacccacgctggctcagaactac
ccccgcagtggcttccccctggaagtgtccaccccgttgggtcaaggccgcgtgaaccag
ctcgggggagtcttcatcaacggcagacccctgcccaaccacatccgacataagatcgtg
gagatggcgcaccacggcatcaggccgtgcgtcatctcccggcagctgcgggtctcccac
ggctgcgtgtccaagatcctgtgccggtaccaggagacgggctccatcagacccggggcc
atcgggggcagcaagcccaagcagggaacaatgccggacatagagaagagaatagaagaa
tacaagcgggaacatccgggtatgtttagctgggagattcgggataaattactgaaggat
gggatatgtgaccgcaactccgtcccttcagtaagctccatcagtcgcaccatgaggagt
aagttcgggggccgaggcgacgaagaggaggacgaagaggagctggagaggaaggagtcg
gaggagaacgaccgcagggcgaagcacagcatcgagggcatcctgggggacagatcgagt
cactccgacgagggctcggacgtggagtcggagcccgacctgccgctgaagaggaagcag
cggcgcagtcgcaccaccttcacggcggagcagctggaggagctggagcgggccttcgag
aggacccactaccccgacatctacacccgcgaggagctggcccagagggccaagctcacc
gaggcccgggtccaggtttggttcagcaacaggcgggcgcggtggaggaagcaggcgggc
gccagtcaactgatggcgttcaaccacctgatcccgggggggttccccccctccgccatg
tccggcatcgccccctaccagctgtccgacagcccctacccctcctccatcgctcaagtg
tcggaggcccccagcacgttgcatcggccccagcccctccctccctcctcgggccaccag
gccggcggcggcgggcaggtggaaggaggctccgcctactgcctcgcctccggacgccac
tccttctcgggctactcagacggcttcgtgggcgccgggggggcggccaacgccatgaac
cccgccctggggaacggactctcccctcaggtgatgggcctgctgaacccgggcggcgtg
ccccaccagccccagagcgactacgccctctccccgctgacgggcggcctggagcccccc
gccggctgcagccagcgcctggaccacctgaaggggctggaggggctgggcagcgtgccc
tccatggccgccctgccctcgctgcccggctcgcagtcctactgccccgcctcctacagc
tcgccgggctacaccgtggaccacgtggcgtcgtaccagtacggccagtacggacaaagt
gccatttcttatctgaggccggagatcacctga
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