Pseudoliparis swirei (Mariana hadal snailfish): 130211154
Help
Entry
130211154 CDS
T09868
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
pswi04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130211154
04371 Apelin signaling pathway
130211154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pswi04090
]
130211154
CD molecules [BR:
pswi04090
]
Proteins
130211154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF_TEN
EGF
DSL
EGF_DL_JAG
hEGF
JAG1-like_EGF2
EGF_Teneurin
EGF_2
EGF_CA
EGF_3
FXa_inhibition
cEGF
EGF_PEAR1L
Glt_symporter
Motif
Other DBs
NCBI-GeneID:
130211154
NCBI-ProteinID:
XP_056297785
LinkDB
All DBs
Position
20:20758867..20804689
Genome browser
AA seq
750 aa
AA seq
DB search
MESTGAHMGARLDPRNGSGRFPSRPGGLRSDPHRGHLHLQRAVVFLVALTIQPQAVCAVG
MFELQIHYFENPLGLLHSGDCCDLRAGGGHRCSARNQCDTFFKACLKEYQARVIPTGACT
FGLGSTGILGGNSQTLHYRGHDGGGRGDDGTNGHIVIPFKYAWPKSFSLVLEALDYDNDT
SESGQLIERVLLSSMLNPSEQWQTYRHHGEPLSLDYRLRFRCDSNYYGPFCNKFCRVRDD
FFGHFNCDPSGSKVCMEGWTGPECKEAVCRQGCHQVHGSCSAPEECKCHYGWKGPLCDHC
VTFPGCVYGSCGNPWQCVCDINWGGLLCDKDLNYCGTHPPCKNGGTCTNTEPNEFHCECR
EGFRGRNCDIVEHACLSSPCMNGAACVEDPTGFSCTCTDGWTGPTCVDAVRQCDRSPCGR
GATCQEAPGGYRCLCPPGWTGRTCQLDTNECEMNICVHARSCRNLIGGYLCDCLPGWTGP
NCDIRNSSCQGLCLNGGRCEDQMSGSRCLCPPGFSGKYCQIALTLCDSAPCLHGGQCVEQ
DGRTFTCNCPMGFSGVFCEKVLDMCNPNPCPKGVPCHITEGRYLCACPEGYYGNECMNLR
NPCNGQHCPGAVSDTTHGGVSFYIILVGVLALVMVCGCVTCAIFLSHLHRKRKKEQAVPQ
EEGINNQREFVNLIRNVDRPGPLLPSAAPPAHPQAPPCYEEIELTLPPSPAPSHPSPALK
RPHGPKLDISNQEREKLNRFHYTNNQDLEA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggagagcacgggagcgcacatgggagctcggctggatcccagaaacggaagcggaagg
ttcccttcgaggccgggcggcctgaggagtgacccacaccggggacacctccacctgcag
cgggctgtggtttttctcgtcgcgctcacgatacaacctcaggctgtgtgtgcagtcggt
atgttcgagcttcagatccattacttcgagaaccccctcggacttctgcacagcggagac
tgctgcgacctccgggccggcggcggccatcgctgctctgccaggaaccaatgtgacact
ttcttcaaggcctgcctcaaggagtaccaggcccgggtcatccccactggagcctgcacc
ttcgggttgggcagcacggggatcctgggcggaaactcccagacgctccactaccgagga
cacgatgggggaggaagaggagacgacgggactaatggacacattgtcattcccttcaaa
tacgcatggccaaagtccttctctttggtgttggaggctctggactatgacaacgacacg
tcagaatcaggtcagttgattgagcgagtcctcctctcctccatgttgaaccctagtgaa
cagtggcagacgtaccgtcaccacggggagcctctcagtctggattaccggcttcgcttc
cgctgcgattcaaattactacggccccttttgcaacaagttctgcagggtccgcgacgac
ttcttcggtcacttcaactgtgaccccagcggctccaaggtctgcatggagggctggacg
gggccagagtgcaaagaagcggtgtgcaggcagggctgtcatcaggtccacggctcctgc
tctgcacctgaagaatgcaagtgtcattacggctggaagggcccgctgtgtgaccattgt
gtgacgttccccggctgcgtgtacggaagctgcggcaatccctggcagtgtgtgtgcgac
atcaattggggaggactgctgtgtgacaaagatctaaactactgtggcacccacccgccc
tgtaagaacggcgggacctgcaccaacacggagcccaatgagttccactgtgagtgtcgg
gaaggtttcagaggacggaactgtgatatcgtggagcacgcgtgtttgtcgtcgccgtgt
atgaacggcgccgcctgcgtggaagacccaacgggcttcagctgtacgtgtaccgacggc
tggaccggacccacctgcgttgatgcggtgaggcagtgtgatcggagcccatgtggccgc
ggagcgacgtgtcaggaggctcctggaggttaccggtgcctctgcccgcctggatggacc
ggcaggacgtgccagctggacaccaacgagtgtgaaatgaatatctgcgtccacgcccgg
tcttgtcgcaacctgatcggtggatacctgtgtgactgtcttcctggatggacggggccg
aactgtgacatcaggaacagcagctgtcagggtttgtgtttgaacggcggccgttgtgag
gaccagatgtcagggtccagatgtttgtgtccacctggtttctctgggaaatattgccag
attgctctgaccctttgtgacagcgccccctgcctgcatggaggacagtgtgtggagcag
gatggaaggaccttcacgtgcaactgtcccatgggattttcaggagtcttctgtgagaaa
gtgttggatatgtgcaatcccaacccttgccccaagggggtgccctgtcacatcacagag
ggcaggtacttgtgtgcatgcccggagggttactatggtaacgagtgcatgaacctaagg
aatccctgcaatggtcaacactgtccaggtgccgtgtcggacacgacccacgggggtgtc
agcttctacatcatcctggtcggcgtcttagctttggtgatggtctgtggctgtgtgacc
tgcgccatattcctctcacacctccatcgaaagcggaaaaaggagcaggccgtcccacag
gaagaaggcatcaacaaccagagggagtttgtcaacctcatcagaaacgtggaccgtcct
gggcccctcctgccttctgccgctccacccgcacaccctcaggcccctccctgctacgag
gagattgaactgacgctgccgccctccccggccccttcacacccgtccccggcactaaag
cgtccccacggccccaaactagacatttcaaaccaggagagggagaagttgaaccgcttc
cactacacaaacaaccaggacctggaggcctga
DBGET
integrated database retrieval system
