Pseudoliparis swirei (Mariana hadal snailfish): 130211171
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Entry
130211171 CDS
T09868
Name
(RefSeq) zinc fingers and homeoboxes protein 2-like
KO
K24880
zinc fingers and homeoboxes protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130211171
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
130211171
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf_C2H2_ZHX
Homeodomain
Homeobox_KN
zf-C2H2_7th_ZNF462
zf-C2H2_ZNF462_11
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
130211171
NCBI-ProteinID:
XP_056297909
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Position
1:20910171..20983078
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AA seq
1159 aa
AA seq
DB search
MSSRRKSSTPCMVRLAPPQEDAVVPAHDELNATEQSETSEPVGGSPAPRQENPDRQTCPI
PAETQNPEPTDREERPGPPPVSDREDAPEEKGRAGGDSDPASRPPRPRGYECRYCPFSTQ
NLSGFEEHVDSSHPAVILNPAYLCAVCNFSTDKFDSLAEHNGRQHPGETGFRFKRARRGD
RTVLEQTIEGRGGGRGDRTALEQTIEGRGDRTALEQTIEGRGEGPPTAERTPDSLQALYR
GSALKGRRDGPIQKNRMATAVNGAVTVAAPAVLHVAPMLQRPPNFSSVPKIAVPLNTAKY
NPSLDGSAALIASFSRFPYPTHAELSWLTAASRHPEQQIRVWFTTQRLKQGITWSPEEVE
EARKKMFDGSTPPAHPTFTAPPTSRQTFVHAAVGRSDGSGAVANANSGLAIGSAPSLKRC
LPTYPTAAAFDPESKRPVMAVAPHSGDAKDRGLMAPPPPPPPKDRLLMAPPPAPVAVPPV
PGEMKRLPAAVPLMPPPSEMVSSLGNPKTKPAVSPPSFVFPEFLTRPLVIPPPIFAPPFK
NPLLFPLNSPSASNEKLPSPPPAAGPHARRPTIIRSIRAPAKAPTQMPGFLYDGRLKEQR
AGEGKASCPRGGAALAPLAEANGASRSDKRSRGQTPLGHNNGVRYFDGPPVALKSAVLTQ
FPLLERMKGKSAEQLKVLEENFLRNGFPTLGGVDDLAGATRLSRQEIDSWFVERRALRDD
LERALLNSMGTRRTGGAGIAAVAKKRRQQHQTGPLNGTRGPGGAVGRLQSPAPPPSAPPI
GVSSPASFSAPPDGRAPALLLDEFARTRWPSPEERGGPARRFTDSRLQGGGLEPEKLFHN
GGQGPPKGSAPGFLQRCQEGALANRKLLEAELSRLLQRRQREELHDRPAGRLRQQDAAEL
KNGGHDLGHDLGHNGGHDLGHDLGHNGGHDLGHDLGHDLGHNGGHDLGHDLGHNGGHDLG
QDLGHDLGHNGGHDLGQDGGHNLGDDGGHDLGQYGGHDLGDNGGHDLGHNGGHNGDNVGL
DLGHNIGHDLGRNGGHELGHDLGHNGGHDLGQDLGHDLGHNGGHDLGQDGGHNGGHNLGD
DGGHDLGQYGGHDLGDNGGHDLGHNGGHNGDNVGLDLGHNIGHDLGRDGGLKVFGSWLED
GHKRRGRELLLDRERKTVG
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcgtaggaagtcctccaccccctgcatggtccggctcgccccgccccaagag
gacgcggtggtgccggcgcacgacgagctgaacgccaccgaacaatcagagacgtctgaa
ccagtgggagggagccccgccccccggcaggagaacccggaccggcagacgtgtccaata
ccggcggagacccagaaccctgagccgaccgaccgcgaggagcggccgggtccaccgccc
gtctccgaccgcgaggacgccccggaggagaagggcagggccggcggcgactctgacccg
gcgtcccggccgccgcggccccgcggctacgagtgtcggtactgcccgttctccacgcag
aacctgagcggcttcgaggagcacgtggactcgagccacccggccgtcatcctcaacccc
gcctacctctgcgccgtctgcaacttcagcaccgacaagttcgactcgctcgccgagcac
aacggccgccagcacccgggcgagaccggcttccggttcaagagggcgaggaggggcgac
cggaccgtcctggagcagaccatcgaggggcggggcggggggcggggcgaccggaccgcc
ctggagcagaccatcgaggggcggggcgaccggaccgccctggagcagaccatcgagggg
cggggcgagggcccaccgaccgccgagagaacccccgacagcctccaggcgctctatcga
gggagcgccttaaagggccggcgggacggcccgatccagaagaaccggatggcgacggcc
gtcaacggcgcggtgacggtcgccgcccccgccgtcctgcacgtcgccccgatgctccag
cgcccgcccaacttcagctccgtgccgaagatcgccgttcccttgaacaccgccaaatac
aacccctcgctggacggcagcgccgcgctcatcgcctccttcagccggttcccgtacccg
acgcacgccgagctgtcgtggctgacggccgcctcccggcacccggagcagcagatccgg
gtgtggttcaccacccagcggctgaagcagggcatcacctggtcccccgaggaggtggag
gaggcgcgcaagaagatgttcgacggctccacgccgcccgcccaccccaccttcaccgcc
ccgccgacctcccggcagaccttcgtccacgccgccgtcggccgttccgacgggtcgggc
gcggtcgccaacgcgaactccggacttgcgattggctccgccccttccctgaagcgatgc
ctgccgacgtacccgacggcggcggcgttcgacccggagtccaagcggcccgtcatggcg
gtcgccccccattccggcgacgccaaagacaggggcctcatggctccaccgccgcctcct
cccccaaaagaccgcctcctgatggctccgccccccgctcccgtagcggttcctccggtc
cccggagagatgaagaggcttcccgccgccgtgcctttaatgccgccgccgtcggagatg
gtctcgtcgctaggaaaccccaaaaccaaaccggcggtgtcgccgccctccttcgtcttt
ccggagttcttaaccaggcctctggtcatccccccgcccatcttcgcgccgccatttaaa
aacccgttgctctttcctctgaactcgcccagcgcttccaacgagaagctgccgagcccc
ccgccggccgccggcccgcacgccaggaggccgaccatcatccggtccattcgcgctccg
gccaaagcgccgacccagatgccgggcttcctttacgacgggaggctgaaggagcagcga
gcgggggaggggaaggcctcctgcccccgaggaggcgcggcgctcgcccctctggccgag
gccaacggggcgtctcgctcggacaagcggtcccgcggccaaacgccgctcggccacaac
aacggcgtccggtacttcgacgggccgccggtggcgctgaagtcggcggtgctgacccag
ttcccgttgcttgagcggatgaagggaaagagcgcggagcagctgaaggtcctggaggag
aacttcctgaggaacggcttccccacgctgggcggtgtggacgacctggcgggcgccacc
cgcctgtcccgccaggaaatcgacagctggttcgtggagcggcgagcgctccgcgacgac
ctggagcgggcgctcctcaactccatgggcacgaggaggacgggcggtgccggcatcgcg
gccgtcgccaagaagcgacgacagcaacaccaaaccggcccgctcaacgggacccgcggg
cccggcggcgccgtgggccgtctccaaagccccgccccgccgccctccgccccgcccatc
ggcgtctccagccccgcttcgttctccgcgccgccagacggccgagccccggcgctcctc
ctggacgagttcgctcggacgcggtggccgtcccccgaggagcgcggcggaccggcccgc
cgcttcaccgacagccggctgcagggcggcggcctggagccggagaagcttttccacaat
ggaggacaaggacctcctaaaggctccgcccccggcttcctgcagcgctgccaggaagga
gccctcgccaacaggaagctgctggaggcggagctaagccggctgctgcagcggcggcag
cgggaggaactccacgaccggccggcgggaaggctgaggcagcaggacgcagcggagtta
aagaacgggggacacgacttaggacacgacttaggacacaacggaggacacgacttagga
catgacttaggacacaacggaggacacgacttaggacatgacttaggacacgacttagga
cacaacggaggacacgacttaggacatgacttaggacacaatggaggacacgacttagga
caagacttaggacacgacttaggacacaacggaggacacgacttaggacaagacggagga
cacaacttaggagacgacggaggacacgacttgggacaatacggaggacatgacttagga
gacaatggaggacatgacttaggacacaacggaggacacaacggagacaatgtaggactc
gacttaggacacaacataggacacgacttaggacgcaacggaggacacgagttaggacat
gacttaggacacaatggaggacacgacttaggacaagacttaggacacgacttaggacac
aacggaggacacgacttaggacaagacggaggacacaatggaggacacaacttaggagac
gacggaggacacgacttgggacaatacggaggacacgacttaggagacaatggaggacat
gacttaggacacaacggaggacacaacggagacaatgtaggactcgacttaggacacaac
ataggacacgacttaggacgcgacggaggcctcaaggtgttcggcagctggctggaggac
ggacacaagaggagaggacgagagctgctgctggaccgagagaggaagacggtgggatga
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