Pseudoliparis swirei (Mariana hadal snailfish): 130211190
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Entry
130211190 CDS
T09868
Symbol
igsf5b
Name
(RefSeq) immunoglobulin superfamily member 5 isoform X1
KO
K06786
junctional adhesion molecule 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04517
IgSF CAM signaling
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130211190 (igsf5b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130211190 (igsf5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130211190 (igsf5b)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
CTX family
130211190 (igsf5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
C2-set_3
I-set
Ig_2
C1-set
ig
SIT
F59B103_C
DUF4381
Motif
Other DBs
NCBI-GeneID:
130211190
NCBI-ProteinID:
XP_056297850
LinkDB
All DBs
Position
20:7260987..7277165
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AA seq
384 aa
AA seq
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MQDSSHRFIDNLLLSNSSLNPVCSHPCTPSKPPSFQSGQHIVRGLMKLSPGTLTVLRGDE
ARFTCSTSDTQWTVMLWLLNGTAVLTISKEFGVLPSINPNVTAETSLVSRGDSWVFVLKS
TERHNQGPVTCDLQGIDRTTASLFVQETGSVKVFGDNKVAFQGQSVLFECQAAGWYPPPT
LQWQVNDKKVNQGEYNISSEEPGKSLFTVTSNLSVTAVKSSHVACQASVSALATPLRSSL
RLTVVTEVVQEGDDCTVPVAVMASFCALLLLLLLCVSTVLWLRQRRQAKPSPREAIRFDQ
SVSGRSSVAEATGGKVNVGYSGEGPTDAVINELIVETRRQEDVVGFHKVPDVVYTSSRSP
HSEDPPQVCLSEENVKSVRRITTV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattcaagccatagattcattgacaatctcctactgagtaattcatccctaaat
cctgtctgctctcatccatgcaccccgtccaaaccaccatcgtttcaatctggacagcac
atagtcagaggtctgatgaagctgtcgcccggcacactaaccgtccttcgaggagacgag
gcccggtttacctgcagtacctccgacactcagtggactgttatgttgtggctgctgaac
ggcacggcggttctcaccatctccaaggagtttggcgtcctgccctccatcaacccgaat
gtgacggccgagacaagcctcgtctcacgtggagacagctgggtgtttgtcctgaagagc
acagagaggcacaaccagggaccagtgacctgtgacctccagggcattgacaggacaaca
gcaagcctgtttgtacaagaaacgggcagcgtgaaagtctttggggataacaaggtggct
tttcagggtcagtcggtcctatttgaatgccaagcagcaggatggtaccctccacccact
ttgcaatggcaggtgaatgacaaaaaggtgaaccagggggaatacaacatcagcagtgaa
gagcccgggaagagcctcttcaccgtaaccagcaacctcagcgtgacggcagtgaagagc
tctcatgtggcttgtcaagcctctgtgtcggccctcgccacaccactgaggagcagcctc
cgtctgacagtggttacagaggtggtgcaggagggagatgactgcacggtccctgtggca
gtaatggcctccttctgtgctctcctgctgctcctcctgctctgcgtctccaccgtcctc
tggctcagacagaggagacaagcaaaaccgagcccacgggaggcaatacggttcgaccaa
tcagtgagcgggagaagctcggttgctgaggcgacaggagggaaggtcaacgtgggatat
tctggtgagggccccacagatgcagttatcaatgagctaatcgtggaaactcgtaggcag
gaggatgttgtcggctttcacaaggtccctgatgtcgtgtataccagcagtcggtctcca
cacagtgaggacccaccccaagtgtgtctatcagaggaaaacgtcaagagtgtcaggaga
attaccacagtttga
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