Pseudoliparis swirei (Mariana hadal snailfish): 130211199
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Entry
130211199 CDS
T09868
Symbol
laynb
Name
(RefSeq) layilin
KO
K10077
layilin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pswi00536
]
130211199 (laynb)
04091 Lectins [BR:
pswi04091
]
130211199 (laynb)
Glycosaminoglycan binding proteins [BR:
pswi00536
]
Hyaluronan
Cell surface receptors
130211199 (laynb)
Lectins [BR:
pswi04091
]
C-Type lectins
Others
130211199 (laynb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
TMEM154
TRAP_alpha
Psg1
Motif
Other DBs
NCBI-GeneID:
130211199
NCBI-ProteinID:
XP_056297891
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All DBs
Position
20:complement(24386986..24395636)
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AA seq
366 aa
AA seq
DB search
MDLMTLFGTVIAVFFHPGAASKINGQRICRRGTERPCFKVSYIQDSRRRLSFEDARRACR
SDGGDLLSIETESEQRLMERFIQQLQAGDGDFWIGLRRSPQLHRAAAAHPGCPSQYYWLD
GSKAKFRNWLWDEPSCGVEMCVVLYHRPSAPPDDEGHFLFHWNDDNCNSKNNFVCQYREE
KPPVVTERGNKALAVPSVRPNVFSTTESDERMKIGLPESSVSLSDDGLYVSYILYATIPT
LLLLLLFVAAGFFCYKQRAKRRKTETESYPSRSKPWMSKTASPYAVVQGPYAFSDVTKLP
PAALDSSVSAHIVTKYSRAPSQDSQCDDYENVSCLDGETGFVTNDIYETCRAQNRHTGWV
ENEIYG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggatctgatgacgctcttcggcaccgttatcgccgttttcttccaccctggagccgcg
tccaaaataaatggccagaggatctgccggcgtgggacagagcgcccgtgcttcaaggtg
tcctacatccaggacagcaggcggaggctgagctttgaggatgcccggcgggcctgcagg
tcggacggaggcgacttgctcagcatcgaaacggagagcgagcagcggctgatggagagg
ttcatacaacagctgcaggctggagatggagacttctggatcgggctccgccgcagccca
cagctccacagggcggcggccgctcacccgggttgcccctcgcagtactactggctcgat
ggaagcaaagccaagttcaggaactggctttgggatgaaccgtcgtgcggtgttgagatg
tgtgtggttctgtaccaccggccctccgcaccacccgacgatgaaggtcatttccttttc
cattggaacgacgacaactgcaactccaagaataactttgtctgccaataccgagaagaa
aaaccaccagtcgttactgagagagggaacaaagcactggcagttccatctgtaaggcca
aatgtgttctcgacgacagaaagtgatgagaggatgaaaataggactacctgagtcgtca
gtttctctctcagacgacggcctctatgtttcctacatcctttatgcaacgattccgact
ctgctgctgctgctgctgtttgtagctgctggcttcttctgctacaaacagcgtgccaag
aggaggaaaacagaaacggaaagctaccccagcagatcgaaaccctggatgtcaaaaaca
gcttcgccttatgccgtcgtacaagggccttacgcctttagtgacgtcaccaaactgcct
cccgccgctctggacagcagcgtgtcggcacacatcgtgacaaagtactcccgtgctcct
tcccaggactcccagtgtgacgattacgagaacgtgtcatgtttggacggggagaccggc
tttgtgaccaacgacatctacgaaacctgcagagctcagaaccggcatactggttgggtg
gaaaatgagatctacggctga
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