Pseudoliparis swirei (Mariana hadal snailfish): 130211211
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Entry
130211211 CDS
T09868
Symbol
cdon
Name
(RefSeq) cell adhesion molecule-related/down-regulated by oncogenes isoform X1
KO
K20033
cell adhesion molecule-related/down-regulated by oncogenes
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130211211 (cdon)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Y_Y_Y
DUF7359
Motif
Other DBs
NCBI-GeneID:
130211211
NCBI-ProteinID:
XP_056297913
LinkDB
All DBs
Position
20:13330923..13363547
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AA seq
1113 aa
AA seq
DB search
MDSGLRVLLSTLLCLSQSLLVGCSSQYPSFLSEPASLVQSRGSVAHLLCSASPPSVVSWR
FRGRPLDRDTLPGVEIHEGSLTIPSLKSSHVGVYQCVARVDHGSAIASRHARVAIAEISE
YEDGRRRSLSVQEGSSVLIECPLPHSVPPALPRLRARGERIDVSTDDYLVLPSGNLQIIS
VSDQHQGMYKCGAFNPVTGETVMQSHGTKLSVKHSDSSPSVRVVYPTAPLTVSVQQSQPL
TLECIVSGSPAPAATWFRNGEEVTLGPSRQRWHNNLAFVAVTRADEGSYACAAESEQGTV
TSANYTVNVLEPLSIAEGLTDQHVPRGSSARFTCVGTGNPSANVTWLFNANPIAPSRRFQ
ISGSSLVLTDVTPQDEGSFQCLLDNGIDSAQSCAILTMQSDPQLGSTAAAAVLLEASPSL
HPMQSDEGHERFLAEDEGGAISLPAERSNGRPTPEAPIITSPPQTHKPDMYDLEWRAGRD
GGSQINAYFVKYRKVDEMGTVVGSWQTVRVPGSEKTLRLSELEASSLYEVLMVARSSAGE
GQPAMLTFRTGKEKSTTATKHPAKPPVISMPPKAPEDKTTNTHFGVVIHDRVPEAPDRPT
ISMATESSVYVTWIPRANGGSPITAFRVEYRRGRSTEWIVAADNISPLKLSVEVRNLEPG
SSYKFRVLAINMYGESPHSVPSKPYQVPQAGQRIADRPVVGPHISATDPISATQIMLRWT
YSPTSNNNTPIQGFYIYYRPTDSDNDSDYKRDMVEGAKHWHLIGHLQPETSYDIKMQCFN
DGGESEYSNVMICETKARQSPGSPSQHPITPPYPHPREPPSSPGGLLYLIVGCILGVMVL
ILLAFIAMCLWRNRQQNNMHKYDPPGYLYQPAEMNGHVLEYTTLPGSSRINGGIHGGYGH
SGPMLPHGCHHLHHKLPNGSGSPFSPGHPHGHDGTLTHSTCDCEHSHPHHNGGGMYTTLP
QTESSDCMSCQNLCNNNRCYNKTNGTFSSGTLPVMHCVAPCQQDGLEMVPLGQVSSQCHG
LDGHMHFGVDAGCQPDEHRESSPSQHSCCLVGNNENCPADKTAEEELECMDMEGPVVCWE
SLGMPDLDCDEKPGWISSSSLAGELIQPGPQEV
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctaagggtcctcctgtccactctgctgtgtctcagccagtccctgctt
gtcggctgctcctctcaatatccatctttcctctctgagcccgcctccttggttcagagt
cgaggatctgttgctcatctgctgtgctcggcgagtcctccctcagtggtttcctggcgc
ttcagaggccgtcccctggaccgcgacaccctgcctggcgtggagatccacgagggctcc
ctcaccatcccctcccttaagtccagccacgtgggcgtctatcagtgtgtggcacgcgtc
gaccatgggtcggctatcgccagccgccacgcgcgtgtggccatagcagaaatatcagag
tacgaagatggccgacggcggtcgttgtccgtgcaggaaggcagctcggttcttatcgag
tgtcctctaccgcacagcgtccctccagcacttccccggctgagagcacgaggggagcgg
atagacgtgtcaacagatgactacttggtgcttccatcaggaaacctccagattatctcg
gtttcggaccagcaccagggcatgtataaatgcggtgcattcaacccagtgactggggaa
accgtcatgcagtctcatggcaccaagctgtcggtgaaacattcggactcctccccctca
gtgagggtggtttaccccaccgccccactgaccgtttcggtgcagcagtcgcagccgctg
acgttggagtgcatcgtgtctggaagccccgcgccggcagccacatggtttaggaacggt
gaggaggtcacactggggccttctcgtcaacgatggcacaacaacctggccttcgttgcc
gtgacgagggccgacgaggggagttacgcctgcgctgccgagtccgagcagggcacggtg
accagcgccaactacactgtgaatgttcttgagcccttgtccatcgccgagggcctgacc
gaccagcacgtccctcgcggctcctccgctcgtttcacctgcgtcgggacgggaaacccg
tccgcaaacgtcacctggctgttcaacgccaaccccatcgccccatcgcgccgcttccag
atctctggttcttcactcgttcttacggacgtgacgccgcaggacgagggctcgtttcag
tgtctgctggacaacgggatcgactcggcacagtcgtgtgcaatcctgacgatgcagtca
gatccacagctgggctccactgctgctgctgctgtgctgctggaggcctccccgtcgctc
caccccatgcagagcgacgagggccacgagcgcttcctcgccgaagacgagggcggcgcc
atcagtctgccggctgaaaggagtaacggccgtccgactccagaggcgccgatcatcacc
agtccgccacagactcacaagcccgatatgtacgacctggagtggagggcggggcgcgac
ggagggagtcaaatcaacgcctattttgtcaaataccgcaaggttgatgaaatgggaaca
gtggtggggagctggcagaccgttcgggtccccggcagtgagaagaccctgcggctgtcg
gagctcgaggcctccagtctctacgaggtgctgatggttgctcgaagttcggcgggcgag
ggccagccggccatgctcaccttccgcaccggcaaggagaaaagcaccaccgccaccaag
catccggccaagccgcccgtcatctcgatgccccctaaagccccggaggacaaaaccacc
aacacgcactttggcgtcgtcatacacgacagagtgcctgaggcccctgaccgccccacc
atctccatggcgactgaaagttctgtgtatgtcacttggatcccgagagccaatggcggg
tctccaatcacagctttccgtgtggagtacagacgtggccgcagcacagagtggattgtg
gctgcggacaacatctcgccactcaagctgtcggtggaagtccgcaatctggagcctggt
tcctcctacaagttccgcgtcttagccataaacatgtacggcgagagtcctcacagcgtt
ccctccaagccgtaccaggtgccacaagccggccagcgtatcgctgaccgccctgtggtc
gggccgcacatctcagccacggaccccatcagtgccacacagatcatgctgcgctggact
tatagccccacgagcaacaacaacactccaatccagggcttctacatttactaccggccc
acggacagcgacaacgacagcgactacaaacgggatatggtcgaaggtgcaaaacactgg
cacttgattggacatctccagccagagacctcttacgatatcaagatgcagtgctttaat
gatgggggggagagcgaatacagcaacgtcatgatctgtgagaccaaagcacgtcagtcc
cccgggtcgcccagccagcaccccatcaccccaccttaccctcacccgcgggagcctccc
agctcacctggaggactgctgtacctgattgtgggctgcattctgggagtgatggtgctc
atcctgctggctttcattgccatgtgtctgtggaggaatcgtcagcagaacaacatgcac
aagtacgacccccccggctacctgtaccagccagcggagatgaatggccatgtcctggag
tacaccaccctgcctggcagcagccgcatcaatgggggcatccacggtggctacgggcac
agcggccccatgttaccccacggttgccatcacctccaccacaagctccccaacggctcc
ggcagcccgttctcacccggccacccacacggccacgatggcaccctcacccacagcacc
tgcgactgcgagcactcgcacccccaccataatggtggaggcatgtacaccactctcccc
cagacggagtcgtctgattgtatgagctgtcagaacctctgcaacaacaatagatgttac
aacaagaccaatggcactttctccagcggcactctgcctgtaatgcattgcgtggcgcca
tgccagcaggacggcctggagatggtgcctctgggccaggtttcgtcgcagtgccacggc
ctcgacggccacatgcactttggagtggacgcggggtgccagccagacgagcacagagag
tcctcgccctcacagcattcctgctgtctggtcgggaacaatgaaaactgtccagcagac
aaaactgctgaggaggagctggagtgcatggacatggaggggcccgtggtgtgctgggag
agtcttggcatgccagacttggactgtgacgaaaagcctggctggatctccagcagcagc
ctggcaggcgagctgatccagcccggcccacaggaggtctga
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