Pseudoliparis swirei (Mariana hadal snailfish): 130211236
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Entry
130211236 CDS
T09868
Symbol
kirrel3b
Name
(RefSeq) kin of IRRE-like protein 3 isoform X1
KO
K25874
Kirrel/Neph family protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130211236 (kirrel3b)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
Kirrel/Neph family
130211236 (kirrel3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
Ig_4
DUF6186
Izumo-Ig
Shisa
Motif
Other DBs
NCBI-GeneID:
130211236
NCBI-ProteinID:
XP_056297938
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Position
20:6372846..6545354
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AA seq
799 aa
AA seq
DB search
MCVCLPTSISNSPTVSRRRFCPLHFTVMIPRVFLLLWISGHGAAAMFSQQPQDLVVVAGQ
PVTLPCSIPGYHGVVLWIKDGLALGVGRDLAGYPRYTVIGDHSSGEHHLRIQRVELMDDS
VFECQAVQAAMRSRPARLTVLVPPEDPVIGGGPVVGLRAGDPLNLTCHADNAKPAASIIW
IRNGEVLNGATYSKTLLRDGRRESTMSTLYLSSSNIETGQQIICKASNKAVPNGKETSVT
IDIQHLPLVNLSVEPQPVLEGNLIKFHCSAKANPPVTLYRWAKGGSIIREVFGDTYEVIV
DHSFFTEPVSCEVTNPLGSTNISRNVDVYFGPRMAAEPQSLQVDLGSDAVFNCAWTGNPS
LTIVWMKRGSGVVLSNENLLTLKSVRQEDAGKYVCRAVVPRVGAGEKEVSLTVNGPPTIS
STQTQQALHGEKGQIKCFIRSTPPPDRIAWSWKETVLESGTSGRYTVETVTTEEGVISTL
TMSNIVPADFQTIYNCTAWNSFGSDTEIIRLKEQESLPVAVIIGIAVGAFVALVVLMGTI
GAFCCTRSQRKEAHLVMPSLPVSICAHQRELASKIKTENLKGVVLAKNDIRVEIVHKDHN
AARENEEHASMKQLMVSVERGEFQQESVLKQLEVLQEEDKEYQHIKDPTNGYYSVNTFKE
HHTPTMAGTQSTEARNPTNTGTLGKQRVPTGMSFTNIYSTLGAGPNRLYDYSQRFALGMG
SSSIELCEREFQRGSLSDSSSFIDTQCDSSVSSYSKPEGFVQFDKDSKASASSSSHYSQS
SSQNSDLTRPLQKRMQTHV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgcctgccaacttcaatttcaaactcgcccactgtctctcgtcgtaggttt
tgccctctccacttcacagtcatgatccctcgggtctttctgctcctgtggatctccgga
catggggcggcggccatgttttcccagcagccacaggacctggtggtggtggcaggccag
cccgtgacgttgccatgctccatccctggttaccatggggtggtcctatggatcaaagat
ggcctggcgctgggagttggcagagacctcgctggctatcctcgttacacggtgatcggc
gaccacagttcaggggagcatcatttgcgaatccagcgcgtcgagctgatggacgactct
gtgtttgagtgccaggccgtccaggctgccatgaggtcccgtcccgcccgcctcaccgtg
ctggttcccccagaggacccagtcatcggtggagggccggtggtgggcctaagggcgggt
gatccactcaatctgacctgccatgctgacaatgccaagccggcagcctcaattatctgg
atacgcaacggagaggtcctgaatggggccacatactccaagaccttgctccgagatggc
aggagagaaagtaccatgagtactctctacctatcgtcttccaacatcgagacaggtcag
cagatcatctgcaaggcctccaacaaggcagtgcccaacggcaaggagaccagtgtcacg
attgacatccagcatctcccacttgtcaatctctcagtggagcctcagcctgttctggag
ggcaaccttataaaattccactgctctgcaaaggccaaccctcccgtcacactctacagg
tgggccaaaggaggaagcatcatcagggaggtcttcggagacacatacgaggtcatcgtg
gaccactccttctttacggaacccgtttcctgcgaggttaccaacccgctgggcagcacc
aacatcagccgcaacgttgacgtctactttggtcctcgcatggctgcggagcctcagtcc
ttgcaggtggatcttggatctgatgccgttttcaactgtgcctggactggaaatccctct
cttaccatcgtgtggatgaagaggggatctggagtggttctcagcaacgaaaacctcctg
acactgaagtccgtgagacaggaggatgctgggaaatacgtttgccgcgccgtggtcccg
cgtgtcggagcaggggagaaggaggtttctctcactgtcaatggcccccctactatctcc
agtacacagactcagcaggctttacatggagaaaagggacaaatcaaatgtttcattcga
agtacacctcctccagaccgcatcgcctggtcatggaaggaaacggtgttggagtcggga
acgtccggccgctacaccgtggagacggtcaccacggaggaaggtgtgatctccacgctg
accatgagtaacattgtgccggctgacttccagaccatctacaactgcacagcgtggaac
agctttggctcggacaccgagatcatacgccttaaggaacaagaatctctcccggtggcg
gtgatcatcggcattgcggtgggagcgttcgtggccctcgtcgtcctcatgggcaccatt
ggagcgttctgttgcacccgctcccagagaaaggaagcgcacctggttatgccctcactg
cccgtctccatctgtgctcaccagagagaacttgcaagcaaaattaagacagaaaatctg
aaaggagtcgtgttggcgaaaaatgacatccgggtggagattgtgcacaaagaccacaat
gcagcgcgggaaaacgaagaacacgcatccatgaaacaactgatggtgagtgttgaacga
ggagagttccagcaggagtcggtgctgaagcaactggaggtactacaagaggaagataag
gagtatcagcacattaaggacccaacaaatggctactacagcgtcaataccttcaaggag
caccacacgcctaccatggccggcactcagtccaccgaggcgaggaaccccaccaacaca
ggcaccctgggtaagcagcgggtgccgacgggcatgtccttcaccaacatctactccact
ctgggagccggccccaaccgactctatgactacagccagcgcttcgcgctgggaatgggc
agcagctccatcgagctgtgcgagcgggagttccagcgcggctcgctcagcgactccagc
tcttttatcgacacgcagtgtgacagcagcgtcagcagctacagcaagccggaaggcttc
gtgcagttcgacaaagacagcaaggcgtcggcctcctcctcctcccactactcccagtcg
tcctcgcagaactcggacctcacccggccactccagaagcgcatgcagacccacgtctga
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