Pseudoliparis swirei (Mariana hadal snailfish): 130211244
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Entry
130211244 CDS
T09868
Symbol
rhbdd1
Name
(RefSeq) rhomboid-related protein 4
KO
K09651
rhomboid-related protein 4 [EC:
3.4.21.105
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130211244 (rhbdd1)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
130211244 (rhbdd1)
Peptidases and inhibitors [BR:
pswi01002
]
Serine peptidases
Family S54: Rhomboid family
130211244 (rhbdd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
UIM_2
PTS_EIIC_2
Motif
Other DBs
NCBI-GeneID:
130211244
NCBI-ProteinID:
XP_056297955
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All DBs
Position
20:12511620..12518804
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AA seq
312 aa
AA seq
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MRRRHRGSHLGLMLLASQVFQMGLDNIPPVTLAVLGLNVYLYLFPAAPLMQACVSVQQAY
WFKDWRRLLLSPLHHVDDWHLYFNMLSFLWKGTKLEQRLGGPWFLYLLSVFSLLTGLVYL
VLEAVLTELTQDQSYSMACAVGFSGVLFALKVLSHHYHPGGVSYVMGFPVSNRYVSWVEL
VLIHITSPGTSFVGHLAGILVGLLYTAGPLKAVMKKCAGFVTSNGYDSRSNAYYSSSGYS
GYHQSPPEYTTNPPTPSSGGLTEEEQLEAAIRNSLNDGGQPSQRAPAPYGFQRPQELTAE
DIRLRRLRRFDR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgccggcatcggggatcccatctgggcctgatgctcctggcctcccaggtgttt
cagatgggtctggacaacatccccccagtcactctggccgtcctgggactcaacgtgtac
ctctacctgttccctgcagctccactgatgcaggcctgtgtgagcgtccaacaggcatac
tggttcaaagactggcgccgccttctgctgtccccgctgcaccatgtggatgattggcac
ctctacttcaacatgttgtccttcctctggaaaggcaccaagctggagcaacggctgggc
gggccctggttcctctacctgctgtcagtcttctctctgctcacaggattggtctatctg
gtgttggaggccgtgttgacagagctcacccaggaccagtcctacagcatggcctgtgct
gttggcttctcaggtgtcctatttgctctgaaggtgctcagtcaccattaccacccagga
ggtgtgagctacgtgatggggttccctgtatccaatcgctatgttagctgggtggagcta
gtgctgatccacataacatcacccgggacctcttttgtgggccacctggcgggtatcctg
gtgggtctgctctacactgccggaccactgaaggctgtcatgaagaaatgtgcaggcttt
gtgacatcgaatggatacgactcccgctccaatgcgtactacagctcttccggatactct
ggttaccatcagtctccaccagaatacacaacaaatcctccaacgccttcctcgggtgga
ctgacggaggaggagcagttggaggcagctatcagaaacagcctgaatgatggaggacaa
cccagccagagagctcctgctccttatggcttccagcgccctcaggagttgacggctgag
gacatcaggttgaggagacttaggaggttcgacagatga
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