Pseudoliparis swirei (Mariana hadal snailfish): 130211342
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Entry
130211342 CDS
T09868
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04020
Calcium signaling pathway
pswi04510
Focal adhesion
pswi04540
Gap junction
pswi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130211342 (pdgfd)
04020 Calcium signaling pathway
130211342 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130211342 (pdgfd)
04540 Gap junction
130211342 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130211342 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130211342 (pdgfd)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Growth factors (RTK binding)
130211342 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
130211342
NCBI-ProteinID:
XP_056298056
LinkDB
All DBs
Position
20:27601430..27655941
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AA seq
375 aa
AA seq
DB search
MSLPVVLPVVLPVVLQLWTLLLFGTFSSADVSMARVLRGNFRRDDFYRRELNVTVTPVGG
AIHSPRFPSSYPRNLMLSWRLTSPPGSRIHLEFDRHFGLEEDENGVCRYDFVEVEDQSET
STIIWGRWCGQKAPPTLNSKSNSIRVTFKSDDYFVAKPGFKVCYSLMYDSLLPASNSNWE
AVTLPMSDQPGGRRTAASTEAPLSLEDLDRSIAAFDTVEQLLRTLSPDTWRQDLDSIYTQ
THIQYRARAYHLASRHSKVDLNRLHDDVKRFSCTPRNSSVNLREELKATGAVFFPRCLLV
KKCGGNCGCGTRDWTNGCGCEANKKTLKLHEVLKYTPDVSLYRRHQKPRVRWVINEIFLT
HHETCECVCPSQPPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcccagtggtcctcccggtggtcctcccggtggtcctccagctgtggaccttg
ttgctgttcgggactttctcctcggcggacgtctccatggccagagttctgaggggcaac
ttccggagagacgacttttaccgcagagagctgaacgtcacggtgacgccggtgggcgga
gccatccacagcccgcgcttccccagctcctacccccgaaacctcatgttgtcatggcga
ctgacgtcaccgccggggagccgcatacacctggagttcgaccggcacttcggactggag
gaggatgagaacggagtgtgcaggtacgactttgttgaagtggaggaccaatcagagacc
agcactatcatttggggtcgctggtgtggccagaaggctccgcccactctcaactccaag
agcaacagcatcagagtcaccttcaagtcggatgattactttgtggccaagccgggattc
aaagtgtgctactccctgatgtacgactccctgctgcctgcatccaacagcaactgggag
gcggtcactctgcccatgtcggaccagccaggaggcaggaggacggctgcctccactgag
gcccccctctctctggaggacttggaccgttccatcgcggccttcgacaccgtggagcag
ctgctcagaaccctgagcccggacacctggaggcaggacctggacagcatctacacccag
acccacatccagtaccgggccagggcctaccacctggccagcaggcacagcaaagtcgac
ctgaaccgtctccacgacgacgtgaagcgcttcagctgcacgccgcgcaactcctcggtg
aacctgcgcgaggagctgaaggccaccggcgccgtgttcttcccccgctgcctgctggtc
aagaagtgcggcggcaactgcggctgcggaacccgggactggaccaacggctgcggctgc
gaggcgaacaagaagacgctcaagctgcacgaggtgctgaagtacacgccggacgtcagt
ctgtatcggcgccatcagaagccgcgtgtgcgttgggtcataaacgagatcttcctcacg
caccacgagacctgcgagtgtgtgtgtccatcccagccgcctcgctga
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