Pseudoliparis swirei (Mariana hadal snailfish): 130211376
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Entry
130211376 CDS
T09868
Symbol
taf15
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K13098
RNA-binding protein FUS
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130211376 (taf15)
09122 Translation
03015 mRNA surveillance pathway
130211376 (taf15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130211376 (taf15)
Spliceosome [BR:
pswi03041
]
Complex A
Other components
Complex A specific factors
130211376 (taf15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
130211376
NCBI-ProteinID:
XP_056298103
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All DBs
Position
20:complement(28673465..28682169)
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AA seq
514 aa
AA seq
DB search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NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggccactgattcgggctacggtggctcacaaagctacgggtcatacgccggtcagcag
agcggcggacagggctacggaccgggcaacggcagcagcgccgcgtacggggcgcagagc
tacagcggctacggccagccgggcgccgccacgcaagaggggtatagccagcctccgccg
ccgagctacgaaaattacggacagccaccatctgggtatggcgacaagtcggcgacttct
caagggcagccgggtgcctacccccccccggcccccggaggcgacagctacggacagccg
agctcttttggtggccaggggcccgggggggccggcgctgggggggccggcgctgggggc
gctgggggggccggcggcgccagctatggaaggtggagtgaaggtgaggatgccgggcag
ggcgggcgcttcggccgtgaccagggggatcgctctgaaggaggcggcttgagaggccgc
ggcggctacgagcgcggtagctccgagcgcggtagctccgagcgcagcggcggatacgac
cgcggcggtggatacgaccgcggcggaggaccccctggtatgggtggtggtgaccgtggt
ggctacaaaaattacggtggcgcccgagacttcgactcacgggacgaaccgggtggcgat
caggacaactctgacaacaacaccatctttgttcagggactcggggaagaggccacggtt
caggagatcggagacttctttaagcaaatcggtatcatcaagatgaacaagaagaccggg
ctgctcatgatcaacatctactccgacaaggccaccgggcagccgaagggcgagtgcacc
gtgtcgttcgacgacccgccgtctgccaaagccgccatcgactggtttgatggcaaagag
ttcaaaggcaaacccatcaaagtctcattcgccacccgcagagctgagttcgcgcagaga
ggaggaggcagtggaggaggtgcacgaggaggaggccgaggaggtttcagaggccgtggc
ggaggaggaggaggaggaggaggaggaggaccaaactttgacattaagggaggcgactgg
ccgtgtcccaacagctcttgtggaaacatgaattttgcacggcggcaagagtgtaacaag
tgtggcacccccaagcccggagacgccggtggaggagatcgtggaggaagaggaggttac
ggcggcgaccgaggtggcggtggcttcagaggtcgtggaggaggtttccgtggaggagac
cgtggaggagaccgtggaggagaccgtggaggagaccgtggaggttacggaggaggagga
ggaggaggaggaggaggaggaggaggaggattcggaggcggcggcggcggctacaaaatg
ggaggacggtttgtgaaatccttcatttggggttcattgagttcgacctgtggctctgtc
atgtcatgttgggcatttatccaagagtacaaactcagaacaacaagaatcacgacagta
acttttcttcaagaaagacaaactccaaaaaaccacgcgtcgtag
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