Pseudoliparis swirei (Mariana hadal snailfish): 130211455
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Entry
130211455 CDS
T09868
Symbol
acin1b
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
pswi03015
mRNA surveillance pathway
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130211455 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
130211455 (acin1b)
03015 mRNA surveillance pathway
130211455 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130211455 (acin1b)
03041 Spliceosome [BR:
pswi03041
]
130211455 (acin1b)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130211455 (acin1b)
Spliceosome [BR:
pswi03041
]
Complex C
Other components
EJC/TREX
130211455 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
130211455
NCBI-ProteinID:
XP_056298132
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All DBs
Position
21:5529484..5549681
Genome browser
AA seq
1214 aa
AA seq
DB search
MADEDITLDGKPLHSLRVADLKTALEQRNLPKSGQKNTLVKRLKGALMLENLQKSSSSHS
GLQPNSNIGEEMSQNSFIKQYLAKQQELLRQRLEREAQQEEEDDESPAVVEEDEDHSEDN
DCSSYGSDKKHHTAPPSMTRAEEKGGADSVMGHVMMARGPEVGPGPILHPQESIEAPGSR
MQRVTFHQGHKEPPAPSPPRAVASLSVRVLGQPDRQGLPPAVPRSQEKEGTAPSEPGSAH
PVLHLSRSAGVSAGGQVHEDSDDDDDGDDESEDDEDWGPGPGGARKGNRVPPQPQQMPPS
APSTVARSKRKLQPPQHIPPPQSPPDTDDHEGEGPGASCGPRVPPFPPSTMQRQDSDSSS
RSSSPDPPIKRRPGPLSLLVHKMESEGAFCGAEAASAVDMSGEAAHSTAGAASSSESSLQ
RLERKRLQENREVEEERRLNEEKEKEQHQKQERDRKKMIQEREKKCLEEEKEKERKRLEE
EGKQHQKEEREKERKHQQEEKEKKRKQEEKEKKRQQEEKEKKRKQEEIEKKQQDEEKKRE
EKLQKEKEKRQETANKGRVVVTEVQDSGSSSDSDSKSDSSSHSSQSSSSSSGDKIIPVKK
LKKTEHDAEDKKTLILKGAEKQCPSKREVSEPSAAAVTEAEPDSESSDAQQPPSGAEPEN
SEGRLEESTTPKAFAVRKISLTSSKTSTVSTDGGAGDADAGAVAARKRRWGSSAAVTKKP
SISITTDSLKSLIPDIKVNQDVVMELHSEELQMSGDEENLDSGQDKGLKIRRTVTQVVPG
DSQENGQMNEEEEEEVDKPEKEKPRRTSRDKRKNSVSEEASETLTTVTLEGEAKKVTPSD
SLVRRSISQQKSGVSVTIDDPVRAAKQPSPPRGKASSIVHLTNLVRPFTLGQLKELLNRT
GSVVEEGFWIDKIKSHCYVTYATTEEAAATRXALHGVKWPQSNPKVLSVDFCEQDELDIR
RGILKPEREEEHVSPPSVPQPRLPPLMPERDRDREHDRERDRGVPVVRDLWAERQREMER
RERARGEREWDRDKVREFASPAQEEQRSRSRDRERRRRERAKSKERKTEKKATEKGDEPP
VKLLDDLFLKTKAAPCIYWLPLSEEQAVQRLLDRTERQKEREQRRKEQQEEDEKKQEEER
KERLKAREKDGGGGGGAAAASAGPAVRVADRDRERERGREREGDKKRENIQRPSVGGGGG
RRSRSRSNPRDRRR
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatgggaaacctctacactcgctccgagtggcggat
ttaaaaaccgctctggagcaaagaaacctcccgaagagcgggcagaaaaacacactcgtg
aagcgactgaaaggggcactgatgctggaaaatcttcagaagtcgtcctcctctcacagt
gggctgcagcccaactcaaatatcggggaggagatgagccagaatagcttcattaaacag
tacctggccaagcagcaggagctccttcgccagagactggagagagaggcccaacaagag
gaggaggacgacgaaagcccagcagtggtggaggaggatgaagaccactctgaggacaat
gactgctcttcctatggctctgacaagaagcatcacactgcacccccctcaatgactaga
gcagaggagaaaggaggagcagattcagtgatgggtcatgtgatgatggcacgcggcccc
gaagttggccccggtcctatcctccacccccaggagtccattgaggctccgggatcaagg
atgcagcgagtcacctttcatcaaggacacaaggagcccccagctccatctcctccccgc
gctgtagcctcgctgtctgtgcgcgtcctgggccagcctgaccgccaggggctgccccct
gccgtaccccgatcccaggagaaggagggcaccgcaccgagtgaacccggatcggctcat
cccgtgctccacctgagccgatctgccggagtctcggcgggaggtcaggtccacgaggac
agtgatgacgatgacgacggtgacgacgagagcgaggatgacgaggattggggacccggt
cccggtggtgcacgaaagggcaatcgagtacctcctcagccgcagcagatgcctccaagc
gccccatccacagttgcgagatccaaacgcaagcttcagcctccgcagcacatcccacct
ccacagagcccaccagacacagacgaccatgagggagaaggccccggggcttcatgcggt
ccaagggtgccgcccttcccaccttccaccatgcagaggcaagactctgactcaagctct
cgttccagcagccctgaccctcctataaagcgcagaccagggcccctttctctgctggta
cacaagatggagtcagagggggctttctgtggagcagaggccgcctctgccgtggatatg
tctggagaggctgcacactccactgctggggccgccagttccagtgaatcttcactgcaa
agattggagagaaagaggctccaagagaacagggaagtggaggaagaaaggcgactgaat
gaggagaaagagaaggaacaacaccagaagcaagagagagataggaagaagatgatccaa
gagcgagagaagaagtgcttggaagaagagaaggaaaaggagaggaaacggctggaggag
gaggggaaacagcaccagaaagaggagagagaaaaagagagaaaacaccagcaagaagaa
aaggagaaaaagcgcaagcaagaagaaaaagagaaaaaacgccagcaagaggaaaaagag
aaaaaacgcaagcaagaggaaattgaaaaaaaacagcaggatgaggagaagaaaagagag
gagaaactgcaaaaggagaaggagaagagacaggagacagccaacaaaggaagggtggtt
gtgactgaggtccaagactcgggttcctcatcagattctgactccaaatcggactcctct
tcacactcgtcacaatcctcctcttcttcctccggtgataaaatcatccctgtcaaaaag
ctgaagaagacagagcatgatgcagaggacaagaaaaccctgatcctgaaaggggctgag
aaacaatgcccttcaaaaagggaggtgtcggagcccagcgcagcagcggtgactgaggcc
gagcccgactccgagagctccgatgcccagcagccgccctccggggccgagccggagaac
agcgagggtcgcctggaggagagcaccactccaaaggccttcgccgttcgcaagatatcc
ttgaccagcagcaagacgtctacggtttccacagacggaggagccggtgatgccgacgcg
ggagccgtggcggcgaggaagaggcggtggggctccagcgcagcggtcaccaagaagccc
tccatcagcatcaccactgactcactgaagtctttgatcccagacatcaaagtgaaccag
gatgtcgtcatggagctgcactcggaggagctgcagatgtccggggacgaggagaacctg
gacagcggccaggacaaaggcctcaagatcagacgcaccgtcacacaggtcgtcccgggc
gacagccaggagaacggacagatgaacgaggaggaagaggaggaggtggacaaaccggag
aaggagaaaccacgcaggacctccagggacaaaaggaagaacagtgtttctgaggaagcc
tcggaaacactgacgactgtcacgctggaaggagaggcaaagaaagttaccccgagcgac
agtctggtgcgtcgctccataagtcaacagaagtccggcgtgtccgtcaccatcgacgac
cccgtccgtgcagccaagcagccctcgccgcctcgcggcaaagcctcgagcatcgtccac
ttgaccaatctggtgcgccccttcaccctgggccagctcaaagagctgctgaacaggacc
ggcagcgtggtggaggagggcttctggatcgacaagatcaagtctcactgctacgtcacc
tacgctacaacagaggaggcggccgccaccagannggccctccacggggtcaaatggcct
cagagcaaccccaaagtcctcagcgtcgacttctgtgagcaggacgagctcgacatccgg
agaggcatcctgaagccagagagggaggaggagcacgtttccccgccgagcgttcctcag
ccccggctgccgcctctgatgcccgagcgagaccgggaccgggagcacgaccgggaaaga
gaccgaggcgtgccggtggtgcgggacctgtgggcggagcgacagcgggagatggagcgc
cgagaacgcgcccgcggcgagcgcgaatgggaccgggataaggtccgcgaattcgcgagc
ccggcgcaggaggagcagcgatctcggtccagagaccgagagcggaggaggagagagagg
gccaagagcaaggagaggaagacggagaagaaggcgacagagaaaggagacgagcctcct
gtgaaactgctcgacgacttgttcctgaagaccaaagcggctccgtgtatctactggctc
cccctctccgaggagcaggcggtgcagaggcttttggaccgcacggagcggcagaaggag
cgcgaacaaaggcgcaaggagcagcaggaggaggacgagaagaagcaggaggaggagcgg
aaagagcggctgaaggcgcgggagaaggatggcggcggcggggggggggcggcggcggcg
agcgccgggccggccgtgcgagtcgccgacagagaccgagagagggaacgcggccgagag
agagagggggataagaagagggaaaacatccagcggccctcggtgggcggcggcggtggg
cgtcgctctcgtagccgtagcaaccccagagatagacgtcgctga
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integrated database retrieval system
