Pseudoliparis swirei (Mariana hadal snailfish): 130211456
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Entry
130211456 CDS
T09868
Symbol
ajuba
Name
(RefSeq) LIM domain-containing protein ajuba
KO
K16682
LIM domain-containing protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130211456 (ajuba)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130211456 (ajuba)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130211456 (ajuba)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
130211456 (ajuba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
130211456
NCBI-ProteinID:
XP_056298133
LinkDB
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Position
21:complement(5549174..5557087)
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AA seq
725 aa
AA seq
DB search
MDRPISKLLGKLKLTDSGSVKFNSSKKKHDSASNSNNSNANSGISGGSGLPLAPSSVASP
SSKPGPFSLASATTSDACVPASGGGGGGGEGGGGGGMGMPPSQLLSPSPSSSSLGAVPQD
GEPPLQPSTLAPLRRRSPQQRASCYLGDGVDSRLWRESGLGPECDPQGAFGSKASLNQRR
YSLELQQLVRRQQLLSQPPALSAPPPYPASAGNGSAPRGGLAEPGYLSEHERHKRLSLQE
ALFYKRLSTGSDLWEVTRPASLSHPPHRTSDVTGGGVGGFFYPPGPTLSPCSSFSLQESV
LVSPRSSFASSTASGGGGSPMGSRCSSNRTSGISLGYDSRYSASGGLPPQQQCPSMQAGG
SVSGCGASGRAGLTPVEAWTQYLEGGMRPGAQDSRHSYPPAVGSAGAACYQAGPEWWVEQ
QAGVRGKDGVVMGDRTRYSDLPGTRYQEELTRLLLRDAALAGGGLLEGLMLKDPSPAVTA
LSKPSTITLGACLAGGPAKPQEDPAVGAGREGAENRQEFFGTCVKCGKGVYGADNACQAQ
DSLYHTRCFTCVSCGRTLRNKDFYNVSGSVYCKEDYMFSGFQAAAEKCSVCGHLILEQIL
QALGNSYHPGCFRCVVCSKALDGVPFTVDHHSSVYCVADYNKTFAPKCAACLQPILPTEG
SEEILRVVSMNKDYHFECYHCEECGKQLSDKPGSQCFPLDSHLLCHSCHMSRACDTQNIP
PHNTH
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacaggccgatcagcaagttactggggaagttaaagctaacggactcgggcagtgtg
aaattcaacagttcgaagaaaaaacatgactccgccagcaactccaacaacagcaacgcc
aactcgggcatctccggaggcagcggtctgccactggctcccagctccgtcgcctcaccc
tcatcaaaacccggcccgttctcgcttgcctctgcaaccacaagcgatgcatgtgttcca
gcgagtgggggaggaggaggaggaggagaaggaggaggaggaggagggatgggaatgccc
ccctctcagctcctcagcccgtcgccgtcctcctcctcgctgggtgccgtaccccaagac
ggcgagccgccgcttcaaccttccaccttggcgccgctgaggcgccgctcgccccagcag
cgagcttcctgttacctcggcgacggcgtggactcccgcctgtggcgcgagtcgggcctg
ggccccgagtgcgacccccagggagcgtttggctccaaagcgtccctcaaccagcggcgc
tactccctggagctccagcagctggtccggcggcagcagctcctctctcagccgccggcg
ctctccgctccgccgccgtacccggcctccgcgggcaacgggtcggctcctcgaggcggc
ctggcggagcccggctacctctccgagcacgagaggcacaagcgcctctctctgcaggag
gcgctgttctacaagcgcctgagcacgggcagcgacctgtgggaggtcaccaggcccgcg
tcgctctcccatccgccgcaccgcacgtcggacgtgaccggaggcggcgtagggggcttc
ttttacccgccgggacccaccctgagcccatgctcgtcgttcagcctccaggagtcggtg
ctggtcagccccaggtccagcttcgcctccagcacggccagcggcggcggaggaagcccc
atggggagccgctgcagcagcaaccggaccagcggcatcagcctgggctacgactctcgc
tactcggcctccggaggcctccccccgcagcagcagtgcccctccatgcaggcggggggc
tccgtgtccggttgcggcgcttcgggcagggccgggctgacccccgtggaggcctggact
cagtacttggagggcgggatgcgtccgggggcgcaagacagccggcactcctacccgccc
gcggtcggaagtgcgggggcggcgtgctaccaggccggccccgagtggtgggtggagcag
caggcgggggtgaggggcaaagacggggtcgtgatgggggaccggaccagatactcggac
ctgcccggcacccgctaccaggaggagctcacgcgacttctcctgagggatgctgcgctg
gcaggcggggggctcctggagggcctgatgctgaaggacccgtccccggccgtcacggct
ctctccaagccgagcacaataacactgggggcctgcttagccggagggccggccaaacct
caggaggacccagcagtcggcgccgggagggagggcgcggagaaccgccaggagttcttt
ggaacctgcgtgaagtgtgggaaaggcgtgtacggggcggacaacgcctgccaggctcag
gacagcctctatcacacgcgctgcttcacctgcgtgtcctgtggtcgcacgctgagaaac
aaggacttctacaacgtcagcggctctgtgtactgtaaagaggattacatgttttcagga
ttccaggctgctgctgagaagtgtagtgtgtgtggccaccttatcctcgaacagatcctg
caggccttggggaactcgtaccatcccggctgcttccgctgcgtggtctgctccaaggcg
ctggacggggtgccgttcaccgtggaccaccacagcagcgtctactgcgtggccgactac
aacaagactttcgccccgaagtgcgccgcttgtttacagcccatcttaccgaccgagggc
agcgaagagatcctcagggtggtgtctatgaacaaggactatcactttgagtgctaccac
tgcgaggagtgtggtaagcagctctccgataagcccggctcgcagtgcttccctctggac
tctcatctcctctgccactcctgtcacatgagcagagcgtgcgacacacagaacattccc
cctcacaacacacactga
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