Pseudoliparis swirei (Mariana hadal snailfish): 130211499
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Entry
130211499 CDS
T09868
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04371
Apelin signaling pathway
pswi04910
Insulin signaling pathway
pswi04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130211499 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130211499 (ppargc1a)
04920 Adipocytokine signaling pathway
130211499 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130211499 (ppargc1a)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
130211499 (ppargc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SR-25
TFIIA
Motif
Other DBs
NCBI-GeneID:
130211499
NCBI-ProteinID:
XP_056298239
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All DBs
Position
21:9319707..9356466
Genome browser
AA seq
1301 aa
AA seq
DB search
MAWDRCNQDSVWRELECAALVGEDQPLCPDLPELDLSELDVSDLDADSFLGGLKWYSDQS
EIISTQYGNDASNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALAGGDVTNASD
RSCPSSPDGSPRTPEPEEPSLLKKLLLAPANSQLSYNQYTGGKAQNHAASSNHRIRPPPA
VVKTESPWNGKARGGSSQQNRPVRRPCTELLKYLTATDDILLHTKASEAKSTWGGASSRD
KSGLGLGASSSSSSPSSSSTSSFSSNSSSSSSTTSKKKSAVLSQQQQQQVQHQQQQQQVQ
HQQQQQQVQHQQQQQQQQQQQQQQLPPQHHQRGESRAAGQCSVAGVGAGKWQRCSHDDGV
EESEGASIPVSHRTSTCGHARPKLEHGPPSEEGRPPGDVGRLAAARFIRYMHSYSLPPRE
VSHSCEHCREAEGATQASEGFGRQGRRNNRGASRAPHRHVTVTIKKRDEKPGHPLLSQLL
TSKRRPSQYRAHQLPPQITPSPTIQSKSAGKRSESPAQAPSKVEKKELGGTNDCRKRGVS
QLEEPDSGSLLSPLAFDLESWVNQQDFGLDMGFGLELRWLNQGFCGEDVDRDDDDDGVDD
DDHVTGSPAAVLSQGPPSPLFPDTRNAEPAPPYIIQGQGHPHRQTLSEHPDVQGLPLLAK
PTTLPLPLTPESPNDHKGSPYENKTIERTLSVEIAGTPGLTPPTTPPHKASQENPFKASL
KTKLSSCSPSALACKRARLSELGPGALAPAPVASGGGPTRKGPEQTELYAQLSKASTALP
YSVTQHTVGCDLEEHRSTGNNKRAAPCGYSDHDYCQASAITKKHGGTAAVTVTPAAVMTV
TPGATAAPVPTAGNVGDRHVECKDSAMPPSSSSFRSPSSASSGRLAQQQHVASVNGDAAR
VQEFGKQTPQIPSQEVPIDWDQLYSAAISRKLLCDQEIREELNKHFGPPLQALYSQGAKE
REPGSKPSKAAMSLEEAENGSYSQRLPGSSYLHPGFLPFQDELELGEGRESRFLYPWEGT
PLDLLFDCPPCSPSCSPPSSCSPSRGSVSPPSSLLLSPSRPFCWTSSGSRSRSRSHSHSD
SRSSSSHHRRRSLSSSPDRRPSWSRHNTDSSNFRSRTHKSPHPQSRSPLSRRPSRYDSYE
DYQHERLKREEYRRDYEKREFERAEQRERQKQKAIQEERRVVYVGRLRSDCTRTELKRRF
EVFGEIEECAVNLKDDGDNFGFITYRYTCDAFAALENGHTLRRSNEPQFELCFGGQKQFC
KSHYTDLDSHSDDFDPASTKSKYDSMDFDSLLREAQRSLRR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacaggtgtaaccaggactcggtgtggagagaattagagtgtgctgccttg
gttggtgaagaccagcccctctgcccagacctccctgaacttgacctgtcagagctggat
gtgagtgacttagatgccgacagcttcctggggggcctcaaatggtacagtgaccaatca
gagattatttccacccagtatggcaacgatgcgtccaatctttttgagaagatagatgaa
gaaaatgaggccaacttgctggcagtgcttacagagaccctggacagcatcccggtggat
gaggacggattgccttcgtttgaggccctggcaggtggggacgtgaccaatgccagtgac
cggagctgtccctcctcccctgacggctcgccacgcacccctgagcccgaggagccttcc
ctgctgaagaagctccttctggcacctgcaaactcccagctcagctataatcaatacaca
ggtggcaaggcacagaaccatgcagccagcagcaaccaccggatcagaccaccacctgcc
gtcgtcaagacggagagcccttggaatggcaaagcgagagggggttccagccaacagaac
cgcccggtgaggcggccttgcactgagctgctgaaatacctaacggccaccgatgacatc
ctgctccacaccaaagccagcgaagccaagagcacatgggggggtgccagtagcagggac
aagagtggcctgggtcttggtgcctcttcctcttcgtcttcgccgtcctcgtcatctacc
tcctcgttctcctccaactcgtcttcctcttcctccaccacctccaagaagaagtcagct
gtgctatctcaacaacaacagcaacaagtgcaacatcaacagcaacaacaacaagtgcaa
catcaacagcaacaacaacaagtgcaacatcaacagcaacagcagcaacaacaacagcaa
cagcaacaacagctgccaccgcagcatcaccagcgaggtgagagccgggctgcaggccag
tgtagtgtggctggtgttggtgctgggaagtggcagcgttgctctcacgatgacggggtt
gaggagtcggagggtgcttccatccctgtcagccacagaacctccacctgcggccatgca
cgccccaaactggagcacgggccgcccagtgaagaaggaaggccgccaggcgatgttggc
cgcctggccgccgctaggtttattaggtatatgcattcttattccctccctccccgagag
gtgagtcacagctgtgagcattgccgagaggctgagggcgccactcaggctagtgagggc
tttggcaggcaaggccgcagaaataatcgaggtgccagccgtgcaccacataggcacgtc
acagtaactattaagaaaagggatgagaagccggggcaccccttacttagccagctgctc
acttccaaacgcaggccttctcagtatcgagcccaccaactgccacctcagatcacccct
tcacccaccattcagagcaaatcggcaggtaagaggtctgagagcccagcacaggctccc
tcaaaggtggagaagaaagagttgggagggaccaatgattgtagaaagcggggagtaagt
cagcttgaagagcctgactcagggtccttgttgtcacctctggcctttgacctagagagc
tgggttaaccagcaagacttcgggctcgacatgggctttggactagagctccggtggcta
aaccaggggttctgtggggaggatgttgaccgtgacgatgatgatgatggcgttgatgat
gatgaccatgtcacgggcagccccgctgcagtgctctcacagggcccaccaagcccactc
ttcccagatactagaaatgcagaacccgcccctccctacatcatacaagggcaagggcac
ccacacaggcagacactcagcgagcaccccgacgtccagggcctcccgttgttagccaaa
ccaaccaccttgccacttcctttgaccccagagtctccaaatgaccacaagggatcacca
tatgagaacaaaaccattgaacgcacattaagtgtggagattgctggaaccccaggtctg
acaccaccaaccacgccaccacacaaagccagtcaagagaatcctttcaaagcatcgctc
aaaaccaagttgtcttcatgttccccatcagccttggcatgcaaaagagccaggctgagc
gaattgggccccggcgctctggccccggccccagttgcctcaggcgggggccccaccagg
aagggtcccgaacagactgagctttatgcccagctgagcaaagcgtccaccgccctacct
tactcggtcacccaacacactgtgggctgcgaccttgaggagcatcgcagcactggcaac
aataagcgggcggcgccctgtggctacagtgaccatgactattgccaggcgtccgctatt
actaagaagcacggcggcacagccgctgttaccgtgactccagcagcagtaatgacggtc
accccaggtgccaccgccgctcccgtgcctactgcgggcaacgtgggggacaggcatgtc
gaatgtaaggactcggccatgccgccatcctcttcatcttttcgttctccatcgtcagct
tcatctggtcgtttggctcagcagcaacatgtcgcctctgtgaatggagacgcagcccgg
gtccaggagttcggcaagcagaccccccagatcccctcacaagaggtcccgattgactgg
gaccaactctactctgctgccatcagcaggaagctcctgtgtgatcaggaaatcagagaa
gaactcaacaagcactttggtccccctttacaagccctttatagccagggtgccaaggag
agagaacctggcagcaaacccagtaaggctgctatgtcccttgaggaggcagagaatggc
tcctactcccagaggctgcctggctccagctacctgcacccagggttcctgcccttccag
gatgagctagagctgggtgagggccgtgagagtcgcttcctctatccctgggagggcacc
cctctggaccttctctttgactgccccccctgttctccctcctgttccccaccatccagc
tgctccccgtcacgaggctcagtctccccaccttcctccctcctcctctctcccagcagg
cctttctgctggaccagcagcggatcccgatctcgttctcgttctcattcccactctgac
tcccgcagctcctcctcgcaccaccggaggcgctccctctctagctcacccgacagacgc
ccctcctggtctcgtcacaacacagattccagcaactttcgttccaggactcacaaaagc
ccccaccctcagtctcgatctcctctcagccgcaggccaagcaggtacgacagctacgag
gactaccagcatgagaggctgaagagggaggagtaccggcgggactacgagaagcgggag
ttcgaaagggccgagcaaagagagaggcagaagcaaaaagcaatacaggaggagagacgg
gtggtgtacgtgggccggctgaggtccgactgcacccggacagagttgaagcgccgcttt
gaagtctttggcgaaattgaagaatgcgctgtgaacctgaaggacgatggggacaatttt
ggcttcatcacgtaccgctacacttgtgacgccttcgccgcccttgagaacggacacacc
ttacgcaggtcaaacgagcctcagttcgagctgtgctttggcggacaaaagcagttctgc
aaatcacattacacagacttggactcccattcggacgactttgatcccgcctccacaaaa
agcaagtatgactccatggattttgacagcttgctgagggaggcccagcgcagcctgaga
aggtaa
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integrated database retrieval system
