Pseudoliparis swirei (Mariana hadal snailfish): 130211551
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Entry
130211551 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: solute carrier family 12 member 6-like
KO
K14427
solute carrier family 12 (potassium/chloride transporter), member 4/6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130211551
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
130211551
BRITE hierarchy
Motif
Pfam:
AA_permease
SLC12
AA_permease_2
Motif
Other DBs
NCBI-GeneID:
130211551
NCBI-ProteinID:
XP_056298333
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All DBs
Position
21:4288615..4315428
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AA seq
1184 aa
AA seq
DB search
MASVRFTVTPTKAEDLPGLSDTSPDISSRSGARVRFGSRESVNQSEGGGAETPDHSNAEQ
GDGNSKISSVYINNSHGLDDDDFYDRNLALFEEEMDTRPKVSSLLNRLANYTNLTQGARE
HEEAEGIGEKKKASKSPQMGTFMGVYLPCLQNIFGVILFLRLTWVVGSAGVLQSLCIVFI
CCCCTLLTAISMSAIATNGVVPAGGAYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILG
AIEILLMYIAPKAAIFESKHPEGXKAAMLNNMRVYGSIFLLLMSLLVFVGVKYVNKLATV
FLACVIVSIVSIYVGALVSAFKPPHFPVCMLGNRTISGHEIEDHQCTKTVLLPAKEAMED
ADNFTSIDENSTMVATFDPSLEFPLLEKTTYLWKQFCQGPEVNASCDEYFLANNFSQIEG
IPGLASGIMSENLWSSYLRRGDVVEKGSLSSSPDAHPASTQQPYVFADIATSFTLLVGIF
FPSVTGIMAGSNRSGDLKDAQRSIPIGTILAILTTSVVYLTSVLLFGACIDGVVLRDKFG
DSVKGNLVVGTLAWPTPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIVPFLRVFGH
GKANGEPTWALLLTALIAELGILIASLDLVAPILTMFFLMCYLFVNLACGLQTLLRSPNW
RPRFSYYHWTLSFLGMTICLALMFISSWYYAIVAMVIAGMIYKYIEYHGAEKEWGDGIRG
LSLSAARYALLRLEEGPPHTKNWRPQVLVLLKLDEDAHVKSPRLLTFASQLKAGKGLTIV
GTVVSGNFLQSYGEALAAEQTLKHLMDKERVKGFCQCIVAQKPREGISHMIQSSGLGGMK
PNTVVMGWPHAWRQSEDPQAWKTFINTVRVTTAAHLALLVPKNISLFPSNSEPCAEGSID
VWWIVHDGGMLMLLPFLLRQHKVWRKCDMRIFTVAQMEDNSIQMKKDLATFLYHLRIEAE
VEVVEMHDSDISAYTYERTLMMEQRSQMLRQMRLSKSDREKEGPPPGSGRPEAGGATRSQ
AQLVKDRNSMLRLTSIGSDDEDDTDGGERDRPTNTAATTGGGGGGGGGGSAEHHRRVQMT
WTKEKSSQYRAMHSGCSTPEGFRDMLSIRPDHSNVRRMHTAVKLNEVIVNKSHDARLVLL
NMPGPPRNTDGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtgcgcttcacggtgacgcccaccaaggcggaggacctcccggggctgtcc
gacacgtcgcccgacatcagctcgcgctccggcgctcgcgtgcgcttcggctcgcgggag
agcgtcaaccagagcgaggggggaggggccgagacgccggaccacagcaacgcagagcaa
ggtgatggaaactcaaagatctccagcgtgtacatcaacaactctcacgggctggacgac
gatgacttctacgacaggaacttggccttatttgaggaggagatggacacgcggccgaag
gtgtcgtcgctgctcaaccggctggccaactacaccaacctgacgcagggcgccagagag
cacgaggaggccgagggcatcggggagaagaagaaagccagcaagtcgccccagatgggg
acgttcatgggcgtgtacctgccgtgcctccagaacatcttcggcgtcatcctgttcctg
cggctcacctgggtggtgggcagcgccggcgtgctgcagagcctctgcatcgtcttcatc
tgctgctgctgcacgctgctgacggccatctcgatgagcgccatcgccaccaacggagtc
gttccagcgggaggcgcctacttcatgatcagccgctctctgggtccggagttcgggggg
gcggtgggcctgtgcttctacttgggcaccaccttcgcgggagccatgtacatcctggga
gccatcgagatccttctgatgtacatcgcacccaaggcggccatctttgagtccaagcac
cccgagggcnngaaggcggccatgttgaacaacatgcgcgtctacggctccatcttcctc
ctcctgatgtcgctgctggtcttcgtgggcgtgaagtacgtcaacaagctggccaccgtc
ttcttggcctgcgtcatcgtctccatcgtctccatctacgtgggcgcgctggtctccgcc
ttcaaaccgccacatttccccgtgtgcatgctgggaaacagaaccatcagcgggcacgag
atcgaggaccaccagtgtacgaagaccgtgctgctgcccgcgaaggaggcgatggaggac
gccgacaacttcacttcaattgatgaaaacagcaccatggtcgcgacctttgaccccagc
ctggaattccctctgctggagaagaccacgtatctctggaagcagttctgccagggcccg
gaggtcaacgcctcctgtgacgagtacttcctcgccaacaacttctcccagatcgaaggc
atccccggtctggccagcgggatcatgtcagagaacctgtggagctcctacctccgcaga
ggggacgtggtggagaaaggctctctgagctcctcccccgacgcccacccggcctccacc
cagcagccctacgtgttcgctgacatcgccacctccttcacgctgctggtgggcatcttc
ttcccctccgtcacaggaatcatggccggttccaaccggtcgggggatctgaaagacgcc
cagcgctccatccccatcggcaccatcctcgccatcctcaccacctccgtcgtctacctg
accagcgtgctcctgttcggcgcctgcatcgacggcgtggtcctccgagacaagtttgga
gactccgtcaaagggaacctggtggtggggaccctggcctggccgacgccctgggtcatc
gtgatcggctctttcttctcgacgtgcggcgccggcctccagtcgctgaccggcgctccc
cgcctcctgcaggccatcgccaaggacaacatcgtgcccttcctccgggtgtttggccac
gggaaggcgaacggcgagcccacctgggccctgttgctgacggccctgatagccgagctg
gggatcctcatcgcctccctggacctggtggctcccatcctgacgatgttcttcctgatg
tgctacctgttcgtgaacctggcctgtggcctccagacgctcctgaggtcgcccaactgg
aggccgcgcttttcctattaccactggactttatcatttttggggatgactatctgcctg
gcgttgatgttcatatcctcctggtactacgcaatcgttgccatggtgatcgccggcatg
atctacaagtacatcgagtaccacggagcggagaaagagtggggggatgggatccgcggc
ctctcgctcagcgccgcccgctacgccctcctgaggctggaggaggggccgccgcacacc
aagaactggaggcctcaggtgttggtgctgctcaaactggacgaggacgcccacgtcaag
tctcctcgcctgctgaccttcgccagccagctgaaggcggggaagggcctgaccatcgtc
ggcacggtcgtctccggcaacttcctgcagagctacggagaggcgctcgccgccgagcag
acgctgaagcacctgatggataaggagcgcgtgaagggcttctgccagtgcatcgtggcc
cagaagccgcgcgagggcatcagtcacatgatccagtccagcggtctggggggcatgaag
cccaacaccgtggtgatgggctggcctcacgcctggaggcagagcgaggacccgcaggcc
tggaagaccttcatcaacacggtgcgggtgacgacggcggcccacttggccctgctggtg
cccaaaaacatctccctgttccccagcaacagcgagccctgcgcagagggctccatcgac
gtctggtggatcgtccacgacggggggatgctgatgctgctgcccttcctgctgcggcag
cacaaggtgtggcgcaagtgcgacatgcgaatcttcacggtggcccagatggaggataac
tccatccagatgaagaaggacctggcaaccttcctctaccacctacgcatcgaggccgag
gtggaggtggtcgagatgcacgacagcgacatcagcgcctacacctacgagcggacgctc
atgatggagcagcggtctcagatgctgcggcagatgcgtctgtcgaagtcggaccgggag
aaagagggccccccccccggtagcggccggccagaggcaggtggagctacgaggtctcag
gcccagctggtgaaggaccgtaactccatgctgcggctgacgagcatcgggtcggacgac
gaagacgacacagacggcggggagcgagaccggccgaccaacacggccgccaccacgggc
ggaggaggaggaggaggaggaggaggcagcgccgagcaccatcggcgagtccagatgacc
tggaccaaggagaagtcctctcagtaccgagccatgcactccggctgctccaccccagag
ggcttcagggacatgctgagcatccggccggaccactccaacgtccggcgcatgcacacc
gccgtcaagctcaacgaggtcatcgtcaataaatcccacgacgcccggctggtgctgctc
aacatgccgggaccgccccgcaacacggacggagacgagaactacatggagttcctcgag
gtcctcacagagggattggagcgcgtcctgctggtgcgggggggaggaagcgaggtcatc
accatctactcctga
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