Pseudoliparis swirei (Mariana hadal snailfish): 130211601
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Entry
130211601 CDS
T09868
Name
(RefSeq) multiple PDZ domain protein-like isoform X1
KO
K06095
multiple PDZ domain protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04517
IgSF CAM signaling
pswi04519
Cadherin signaling
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130211601
04519 Cadherin signaling
130211601
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130211601
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Ortholog
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
T15H9-4_C
L27_1
Motif
Other DBs
NCBI-GeneID:
130211601
NCBI-ProteinID:
XP_056298417
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All DBs
Position
21:complement(10336541..10379577)
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AA seq
2094 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQHLRD
QESVQVSNGSDLSDDAAEVQPNGGHVPYSDISDSSLINEKTLCDEFEHIVNSMAQGRCVT
HVDLQKPESGGLGFSVVGLKSENRGELGIFIQEIQPGSVAHCDGKLKEADQILAINGQLL
DQRVTHQQAIGILQCASERVQLTVARGPIPQLSSPAVSRTPSAASTLSASSSAWQHVETI
ELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGRLHSGDHILRIGDTDLYGMGSEQV
AQVLRQCGNRVKLVVTRGPGDENPSLSAVMPVVLPTVNEQGYEEEEDEAFDVSLVKNTQG
LGITIAGYVGDKNAEPSGIFVKSITKDSAVDQDGRIHVGDQIIAVDCVNIQGYTNQEAVE
VLRHTGQTVHLKLIRRGFRPEEMPPNVVPVVIVPSPSTSVPTTTTTVAMMEPEPERNKAE
EAAQDEKSEGSDVSPADDPLTENEHGMELTPFEEEDLMKKWHEILGPNNEVVVAQVEKYS
ESSGLGISLEANSGHHYIRSVLPEGPVGRCGKLFSGDELLEVNGLSLIGETHKEVVRILK
ELPLCVNMTCCRPAPPLQFDVDAVQPESETLSTASPLKKQIDPSSALVAEDSEENVAAAT
HGNVTEEAIGSPLAMWELEIQNIELEKGEGGLGFSILDYQDPLDPVKTVIVIRSLVPSGV
AEQDGRLLPGDRLMYVNTTNLENASLEDAVQALKGANLGTVQIGVAKPLPGICGYSHSPH
PYGEQEITSSPTIHSFDFINIWVEEGEEEGLTEGIVYRAEPALIDTCDADLSDEKVLDLT
YSGIEDDTFQASMIALRGSSCSADLDYLQSSTPKMTARLDLLDEHPCFAAPSGLADDTQA
FSPERPASPLTPLCLRGHNLTFKAILSSPDHFLEQHSTQEEPAESSNSSTLAGIGMRLAF
PDEPVENFHDEKEPPMSYEHIGDIKGKEGGVKESAEAGDKEVLTSGSNFERTITVVKGNS
SLGMTVSAMKDGLGMLIRSIIHGGSISRDGRLGVGDLILTINGEPTANMTNAQARAMLRR
HSLIGPDLGSACAPEDDLCPFYVITYVPAEYLEEYKASLEQAKEDVVCETAPVPAADPKD
IPSLLEREDGEGEESAAYSNWNQPRKVELFRAPGKSLGISIVGGRGMGSRLNNGEVMRGI
FIKHILDDSPAGQYGTLKTGDRIVEVDGADLRDASHEEAVEAIRRAGNPVSFLVQSIIHR
PRPKSISPAVEKHSASLTCMPHRTRQRPPLPFLQLNSHRGSSLCCINQTDLAPPLPQSSV
TDPSEERAAATTRDNKDKEGYSHSRLFLRLSPTNPFTPTPFKPAKREAARPSPSSPVLLL
PVLPHVGETDTDMLTEIPGTPAEAEEEQVEDEFGCNWKNIIQRYGSLAGVLHMIELEKGK
TGLGLSLAGNRDRSRMSVFVVGIDPNGAAGRDGRMEVGDELLEINEQVLFGHSHQNASSI
IKSSPSQVKIIFVRNTEVLNQMAVGPVREHEGDALEPRTEEDRGIGITFVEGNTDSEVEI
QSISEVKGLTGKEGIPAGGRLFTVNGESELGCTVETATCQDGDSSADVFASLPSMPSATT
SSPSQPQAEVVTSQSRSSTPSTLASDPTTCPIIPGCETTIDISKGCTGLGLSIVGGCDTL
LGAIIIHEVYEEGAASKDGRLWAGDQILEVNSVDLRAATHDEAINVLRQTPQRVRLVVYR
DEAQYKEEDLWDSFTVELHKKSGQGLGLSIVGRRNDTGVFVSDIVKGGLVDTDARLMQGD
QILSVNGEDVRSTTQEAVAALLKCCVGPINMDVGRFKAGPFHSERRLSQSSQMSETGSTK
VASLSCSDSGNLPGDHDKLSRSPDSPDQDTRTVEFIKGPSDSLGISIAGGVGSPLGDIPI
FIAMMNPVGLAAQTQKLKIGDCIVSICGTSAEGMTHSQAVTLLKNATGTIQLQVVAGSDT
TVTGPSKEQAAGGLTPSCIFQDDLGPPQYKTINLERGPDGLGFSIVGGYGSPHGDLPIYV
KTVFGKGAAAEDGRLKRGDQIMAVNGQTLEGVTHEEAVGILKRTKGIVTLTVLS
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaacaatggatacacagcgtgccttgcaggcggtggagcgtctccaggccaaa
ctgaaggagcggggggaggtgcccactgaggagaagctcagcctgctcaaatctgtgctc
cagagccccctgttccaccagatcttggccttgcagaagtctgtccagcatctcagagac
caggagagtgtccaggtgtcgaatgggagtgacctcagcgatgacgcagcagaagtccaa
cccaatggcggccacgttccctactcggacatatcggattcttcactcatcaatgaaaag
acattgtgtgacgaatttgaacacattgttaactccatggcgcaggggcgctgcgtgaca
cacgtggacctacaaaagccagagtcaggaggtcttggcttcagcgtggtaggcctgaaa
agcgaaaaccgaggagagctcggcatcttcatccaggaaattcaaccaggaagtgtggct
cactgtgatggcaagctcaaagaagctgaccagatcctagccatcaatggccagctcctg
gaccagagagtgacccaccagcaggctatcggcatcctgcagtgtgcatcagagagggtg
cagctcacggtggctagaggaccaatacctcagctgtccagtcctgcggtgtcccgcacg
ccctcggctgccagtacactgtcagccagctccagtgcgtggcagcatgtggaaacgatt
gagctggtcaacgatggcaccggacttggcttcggtattgtgggaggaaagaccactgga
gttattgtcaaaaccatccttcccggaggcatagctgatcaggacggccgcctgcatagc
ggggaccacatcctgagaatcggagacactgacctgtacggcatgggcagcgaacaggtg
gcccaagtcctcaggcagtgtggcaacagggtgaagctggtggtcaccaggggtcctggg
gacgaaaatccctctctctctgctgtcatgcctgtggtgctccccactgtcaatgaacag
ggctacgaggaagaggaggatgaagcatttgatgtgagccttgttaagaacacccaggga
ctggggatcacgattgctggctatgttggagataaaaatgcagagccctctggcattttt
gtgaagagcataacaaaagacagtgccgtggatcaagatggccgtattcatgttggagat
cagataatagctgtcgattgcgtaaacatccagggatacaccaatcaggaggcagtggag
gtgctcagacacacaggccagacagtccaccttaagctgatccggcggggcttcaggcct
gaggagatgcccccgaatgtggtccctgttgtcatcgtcccgtccccttccaccagcgtc
cccaccaccaccaccacggtcgccatgatggagccggagccggagaggaacaaggccgag
gaggctgctcaagatgaaaagagtgaaggatctgatgtcagcccagcagatgatccgctt
acagagaacgaacatgggatggagttaacaccctttgaagaggaagatctaatgaagaag
tggcacgaaattctgggtccaaacaatgaagttgtagtggctcaggtggagaagtatagc
gagagcagtggactgggcatcagtctagaagccaacagtggacatcattacatccgctct
gttctgccggagggacctgttggtcgctgcggcaagctgttcagtggagatgaactgctt
gaggtcaatggtttatccctgattggtgaaacccacaaagaagtagtcagaatcttgaag
gagcttccactttgcgtcaacatgacatgctgtcggcccgccccccccctgcagtttgac
gtggatgccgtccaaccagaatccgagactttgtcaacagcatcaccattaaagaaacaa
atagacccgagcagcgcactggttgctgaagactcagaggagaatgtagcggcagcgaca
cacggtaatgtgacagaggaggcgataggatctcctttggctatgtgggaattggagatc
cagaacatcgagcttgaaaagggagaagggggattgggattcagcattctggactaccag
gacccattggaccccgtcaagacggtgatcgtgattcgctccctggttcccagcggcgtg
gccgaacaggatggcagactgttgccaggagaccgactcatgtatgttaacaccactaac
ctagagaacgccagcttggaggacgctgtccaggccctgaagggagccaacctcggcaca
gtccagataggagttgccaaacccctgcctggaatatgtggatattcccactctccacac
ccatatggtgagcaggaaattacttcatcacccaccatccattcatttgacttcataaat
atttgggttgaagaaggagaggaagaaggactgactgagggcatcgtttaccgagcagag
cctgcattgattgacacctgcgatgcagacctgtccgatgagaaggtgttagatctcact
tactctgggatagaggacgacactttccaggcatccatgattgctcttcgcggaagcagc
tgtagtgcagacctggattacctgcagtcatccacgcccaagatgacggctcgcctggac
ttgttggatgagcatccttgctttgcggcgccgtccggcctcgcagacgacacacaagcg
ttctccccggagaggccggcctctcctctcactccactgtgtttaagaggtcataacctg
acttttaaggccatattaagcagtcctgatcatttcctggagcagcactcgacacaagaa
gagccggcggagagctcaaactcctccactctggctggaatagggatgaggttggccttc
ccagatgaacccgtggagaactttcacgatgagaaggagccacccatgtcttatgaacat
attggagatataaagggcaaggagggtggtgtgaaagaatcagcagaagccggtgacaag
gaagtcctgacctcggggagcaattttgaaaggaccatcacagttgtcaagggcaactcc
agcctaggaatgaccgtgagcgccatgaaagatggtttgggaatgctgatccgcagtatc
atccacggtggatccatcagccgtgatggacgtctgggtgtcggtgatctcatcctgacc
atcaacggagagcccacggccaacatgaccaatgctcaggctcgcgccatgctcagacgc
cactctctcattggaccagacctgggatctgcttgtgcacctgaggacgatctgtgccca
ttttatgttattacatatgttccagcagaatatctggaggagtacaaggccagcctcgag
caggcgaaagaggatgtcgtctgtgaaacggctccagtcccagcagcagatccaaaagat
attccaagcctcctggaacgggaagatggcgagggagaggagagtgccgcttatagcaac
tggaaccaacctaggaaagtggagctcttccgagcgccaggcaaatccttgggtatcagt
atcgtcgggggccgagggatgggcagccggctgaacaatggagaggtgatgaggggcatt
ttcatcaagcacatcctggacgacagtccagctggacagtacgggaccctgaagactgga
gacagaattgtagaggtggatggagccgatctcagagatgctagtcacgaggaggcagtg
gaggccatacgcagggcgggcaaccctgtgtccttcttggtccagagtattatccacagg
cccaggcccaagtcaatatcgcctgccgtagagaaacactccgcctctctcacatgcatg
ccacatcgcacacgtcagaggccgcccctgccctttctgcagctaaatagccaccgcggg
tccagcctgtgctgcattaatcaaaccgacttagcgcctcccctccctcagtcatcggta
acggaccccagtgaggagagagctgcggccacgacgagggacaacaaggacaaggagggt
tacagtcacagtagacttttcctccgcctctccccaactaaccctttcactcccaccccg
tttaagcctgcgaagcgtgaagcggcgaggccatctcccagcagccctgtcctcctcctg
ccagtgctgccccatgtgggagagactgatacagacatgctgacagagattcctggcacg
cctgctgaggcagaggaggagcaggtggaggacgagtttggatgcaattggaagaacata
atccagcgctatggcagcctcgcgggtgtcctccacatgattgagctggagaaaggcaag
acaggcctgggcctcagcctggcggggaaccgggaccgctctcgcatgagcgtgttcgtg
gttggaatcgaccccaacggggcggccggcagggacggacgtatggaagtcggggatgag
ctgctggagatcaatgagcaagtcctgtttggccacagtcaccagaatgcatcctccata
atcaagagctcgccatcccaagtcaaaatcatctttgtcaggaacacggaggtgctgaac
cagatggccgtgggacccgtgagagaacacgagggagacgcactggagccccgcaccgag
gaagaccgaggaattgggatcacgtttgtggagggaaatactgacagtgaagttgagatt
cagagtatatctgaagtgaaaggactcacaggcaaagagggcataccagcagggggccgt
ctcttcactgtgaatggtgaatcagagctcggctgcactgtggaaacggcaacctgccag
gacggggatagctcggctgacgtctttgccagcttacccagcatgcctagtgccaccacg
agttccccgagtcaaccacaggcagaagtagtcacgagtcagagtcgctcttccacccct
tccactctggccagtgacccgacgacctgtcccatcatccccggctgtgagaccaccatt
gacatctccaaaggctgcacgggcctgggcctgagcatcgtgggaggctgtgacaccctg
ctgggagccatcattatccatgaagtttatgaagagggagcagcctcaaaagatggcagg
ctgtgggcaggagaccaaatcctggaggtgaacagcgtcgacctgcgtgcagccactcac
gacgaagccatcaacgtgctgcggcagaccccacagagggtccggctggtggtctacagg
gacgaagcccagtacaaggaggaagacctgtgggactcgttcactgtggagctccacaag
aagtctggccagggcttgggcctgagcatcgtagggaggaggaatgacacgggcgtgttc
gtgtccgacattgtgaagggaggcttggtggacactgatgcccgcctgatgcagggcgac
cagatcctgtcagtcaacggcgaggatgtcaggtcgaccactcaggaggccgtggctgct
ctcctcaagtgctgcgtggggcctataaacatggacgtcgggaggtttaaggcaggcccc
ttccactcagaaagaaggctctctcaaagcagtcagatgagcgaaacgggcagcaccaag
gtggcctctctgtcatgttccgactctgggaaccttcccggggaccacgacaaactaagt
cggagtccagattctcccgatcaggacaccaggacggttgagttcattaaaggtcccagc
gattctctgggtatcagcatagcggggggcgtgggcagccccctgggtgatatccccatc
tttatcgccatgatgaatcccgtcggcctggcagctcagacacagaagctcaagattggg
gactgcatcgtcagtatctgtggaacctctgctgaaggcatgacccactcacaggctgtc
actctgctcaagaacgccacaggcaccatacagctgcaggtggtagcaggcagtgacacc
accgtgacgggtccctctaaggagcaggcagctggaggtctcacgcccagctgcatcttc
caggatgacctcggcccacctcagtataagaccatcaatctcgaaagaggaccagacgga
ctgggcttcagtatcgtcggagggtacggcagcccccatggagacttgccgatctatgtt
aaaactgtttttggaaagggggcagcagcggaggacggccgcctgaagcgaggagaccag
ataatggccgttaacgggcagactctggagggcgtcactcatgaagaagccgttggcatc
ctgaaaagaaccaaaggaattgtcacgctcactgtgctatcgtag
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integrated database retrieval system
