Pseudoliparis swirei (Mariana hadal snailfish): 130211620
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Entry
130211620 CDS
T09868
Symbol
eif4a1a
Name
(RefSeq) eukaryotic translation initiation factor 4A1A
KO
K03257
translation initiation factor 4A
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130211620 (eif4a1a)
03012 Translation factors [BR:
pswi03012
]
130211620 (eif4a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130211620 (eif4a1a)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130211620 (eif4a1a)
mRNA cycle factors
Stress granule specific factors
130211620 (eif4a1a)
Translation factors [BR:
pswi03012
]
Eukaryotic type
Initiation factors
eIF-4
130211620 (eif4a1a)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130211620 (eif4a1a)
Exosomal proteins of bladder cancer cells
130211620 (eif4a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
CMS1
UvrD-helicase
Flavi_DEAD
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
130211620
NCBI-ProteinID:
XP_056298468
LinkDB
All DBs
Position
21:15330977..15337468
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AA seq
405 aa
AA seq
DB search
MSAEYDNRENNGPEGMEPDGIIESNWNEITDSFDEMNLREALLRGIYAYGFEKPSAIQQR
AIMPCIKGYDVIAQAQSGTGKTATFAISILQQIDVELKGTQALILAPTRELAQQIQKVVL
ALGDYMGANCYACIGGTNIRSEVQKLQAESPHIVVGTPGRVFDMLNRKNLSAKYIKMFVL
DEADEMLSRGFKDQIYEIFQKLPSSTQVVLLSATMPADVLEVTKKFMREPVRILVKKEEL
TLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSA
LHGDMEQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIG
RGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaatatgataatagagagaataatggccctgagggcatggagccagatggc
atcattgagagcaactggaatgagatcactgacagttttgatgagatgaacttgcgtgag
gctctgctcagaggaatttatgcctatggtttcgagaagccctctgctatccagcagaga
gccattatgccttgtatcaagggttatgatgtgatcgctcaggcccagtctggcactggg
aagaccgccacctttgccatttccatccttcagcagatcgatgtggagctgaaaggcacc
caggcgttgatcttggctcccaccagggagctggctcagcagatccagaaggtggtgctg
gctctgggtgactacatgggcgctaattgctacgcctgtatcggagggaccaacatccgc
agtgaagtccagaagctccaggctgagtcccctcacatcgtggtgggaaccccgggccgt
gtctttgacatgttgaatcgtaaaaacctctctgccaagtacatcaaaatgttcgtgctg
gacgaggctgacgagatgctcagtcgagggttcaaggaccagatctatgagattttccag
aagctgccaagcagcacacaggttgtccttctgtcggccaccatgccggctgacgtgttg
gaagtcacgaagaagttcatgcgtgaacccgtcagaatcctggtgaagaaggaggagctg
acccttgagggcatccgtcagttctacatcaacgtggagaaagaggagtggaagctggac
acgctgtgtgacctgtacgaaaccctgaccatcacacaagcggtcatcttcatcaacacg
aggaggaaagtggactggctgacagagaagatgcacgccagagacttcaccgtgtctgct
ctgcacggtgacatggagcagaaggagagagacttgatcatgagggagttccgctccggc
tccagtcgagtcctcatcaccactgacctgctggccagaggtattgatgtccagcaggtg
tctctggtcatcaactacgacctgccgaccaacagggaaaactacatccacaggattggt
cggggcggtcgtttcggcagaaagggcgtcgccatcaacatggtgaccgaggatgacaag
cgaaccctgagggacattgaaacattctacaacaccaccgtggaggagatgcccatgaac
gtggccgatcttatctag
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