Pseudoliparis swirei (Mariana hadal snailfish): 130211621
Help
Entry
130211621 CDS
T09868
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130211621 (sox19b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130211621 (sox19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130211621
NCBI-ProteinID:
XP_056298469
LinkDB
All DBs
Position
21:15346701..15349704
Genome browser
AA seq
306 aa
AA seq
DB search
MYSMMEHELKPTGQPPSHQTSQGMSPVTGNMTGGMGGNGNSHPGSKTACAPAVDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KDYPDYKYKPRRKTKPMLKKDTQVGKYPLSAGSLLAAAQGQGGSPRMDSYGWGPTGGYAG
MQSEALGYTQQLHRYDLSALQYPPAMSAAQTYMNGGNSYSPMSYSSPPQQPSPVTMSMVK
AEPVSHSPPTGTPNHHRGPLQGDLRDMISMYIPGPGGDAGDPTAAQRGYTSVQQHYLSGT
VPLTHI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagcacgagctgaagccaaccggccagccgccgtctcaccagacc
tcccagggaatgtccccggtcaccggcaacatgaccggcggcatgggcggcaatggcaac
tctcacccgggctccaagacggcgtgcgcgccggcagtcgaccccatggataaagtgaag
cggcccatgaacgccttcatggtctggtccaggggacagaggcgcaagatggcccaagaa
aaccccaaaatgcacaactccgagatcagcaagcggctgggcgccgagtggaagctgctg
accgacgccgagaagcggcctttcatcgacgaggccaagcggctgcgggcggtccacatg
aaggactaccccgactacaagtacaagccgcgccgcaagaccaagcccatgctgaagaag
gacacccaggtgggcaagtacccgctgtcggcggggagcctgctggcggcggcgcagggc
caaggcggtagcccgaggatggacagctacggctggggccccaccggggggtacgccggc
atgcagagcgaggccctcggctacacgcagcagctccaccggtacgacctgtcggcgctg
cagtacccgcccgccatgtccgcggcgcagacgtacatgaacggaggcaactcgtacagc
cccatgtcgtacagcagccccccgcagcagcccagccccgtcaccatgtccatggtgaag
gcggagccggtgtcccactcgcccccgacggggacgcccaaccaccaccgcggccctctg
cagggagacctcagggacatgatcagcatgtacatccccggcccggggggcgacgccgga
gaccccacagcggcacagaggggctacaccagcgtccagcagcactacctgtctggaacc
gtgccactcacacacatatag
DBGET
integrated database retrieval system
