Pseudoliparis swirei (Mariana hadal snailfish): 130211632
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Entry
130211632 CDS
T09868
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130211632 (dennd4c)
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130211632 (dennd4c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR
PPR_3
PPR_long
Peptidase_C50
Motif
Other DBs
NCBI-GeneID:
130211632
NCBI-ProteinID:
XP_056298479
LinkDB
All DBs
Position
21:8376015..8404538
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AA seq
1913 aa
AA seq
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MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIDGTYSGQPANLNHGSLKSPELFLCYKRGRGKSPLIDIGVLYEGKERLIQGCEIIQATP
YGRCANVNNSSATSQRIFITMRRAPPVQPQNSLAVTDICVIVTSKGEIPPHTFCKVEKNL
NCGMWGSNVFLCYKKSVSTSNSISYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WDPNTRDPLPVFSTFVLTSSSGEKVYGAAVQFYEPHPVDQLSEKQKIQLGLLTAVEKKVI
PNRPVKSNKCICLLSRWPFFESFRKFLIFLYKLSVSGPQPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDNFILSQPVCTPLPLSGADYGTLLMNLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHGNWKNLPKKPGKSLINALSNLHQQLATVSGPQMEQENSAV
DMTPIEADFTWHKKKTSLEMEIQEVFLRFMATILRGYRNYLKPITQEPSVKATAADSLYD
LQGLLKSRDRAHQKFYSQLTKTQIFIRFIEECTFASDKDTGLAFFDDCVEKLFPSDKITD
KGTKVEGESSEDTRLLELDESQKSEHTVFVMPPEPPVSDGTEPASRYTYNSFPRLHMELF
DRPREFRPVLSSRPTGASLLPAKRTKQEIKLAYKMAKHFHADPPPWARCLFSHCYSLWFI
CLPTAVRHSKSKSRAMQQAYNVLLKMRTTEVEVLDEVCYRVVMHLCCVWGLPVMAVRVLV
EMKRAGVHPNVITYGFYNKTVLESPWPSANRSGLFMWTKLRNVVRGVSQFKHVPDRTPSK
KEPTTAPSTGGSAVADADRLSHGSADSSSEVNGEERNRFAHSRGMEDTADNHCGTGRQSD
QGYGSKDELHQELMEHSAALSTEGRNDPRAQHTGGDVAVSVDSAVAVAEPPSPVDVPSPV
PSIVKLSGSLDSGRETGSGKLFRRLSKTDNVSLPEDDASLPPGDAANQPQQQRQKSFAER
SCSFSAETRDGMLLEKGVDHMASQMGADARILAAALCPGLTPPPNSVSKALFKDLEEEPE
DDPGLALGKLPEEDGAAAEEGKGEDEEVDGAELKMGERERKHTETSEDNPGLRVPTLERA
DVEAGADPLSLLVTESDESASVGSLEPPRSVPAVVSRNLAEEIEMYMSLRSPPSVKSSSM
ELQQAPGDCADPPQPTQSLERRASLPVPPVKTPTGSPGDTPKRSPTAVTRSKTFATKTKT
PSSATGSPGPRSSSLTALVKSSQGGSLGSVINSFSAIKMDHLLSGPKIDVFKSSMKQAAN
VASKVWGAVASAYSYSDDEEDQAQGGGGGFPAHLDEHTLAADESPERGAIPGLVANGLNQ
SCTSLGSSSGSSDTGRGTHPTHPTPGRAGRGPDSEQGSLHHASSSSIYQNCALEVLMSSC
SQCRSCEALVYDEEIMAGWTADDSNLNSDCPFCGTAFLPLLHVEFHDLRTMTGFYINPSA
SGDSIHSTSTQPIASSSADIKTTELITFPEEEPRETPDNLPVAHTSLIPEPAQSDPLGLL
EHQAARQQRSCSGTSLTRSNSVGGPLQSLDYSPRPGHGVSTTSLPCSLQAVSDGMGTKRP
NPKPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLPTHL
PGLILTSEHCNNGVQLPLTSLSQDNKQVFVQLLWDNINLHQEHGEPLYLSWRTLLEKKGM
LAPTDHQEIRTLLNTIVRNIQTNDIYGPINLLIREIKQRPEGVKRQRSIYREILFLSLVA
LGKENIDVEAFDREYRLAYEELSAEQLKSLHRIDEPPSPNVQWCLKCFGTPII
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgggtgaccgactactttgtagtggccgggctgacggac
aaatccacgcccctggagcaggacctgtcggagaccaagtccagtgggcccaaagcgccc
atcaccgacttggccgtcatcaacaagtcggcgggagaaacggtgcccgagggcttcacg
tgcatcgacggcacctacagcggccagccggccaacctcaaccacggcagcctgaagagc
cccgagctgttcctgtgctacaagaggggtcgggggaagtctcctctcatcgacatcggt
gtgctgtacgagggtaaggagcgtctgatccagggctgcgagatcatccaggccacgccg
tacggccgctgcgccaacgtcaacaacagctcggccacctcgcagcgcatcttcatcacg
atgcgccgggcgccgcccgtccagcctcagaactccctcgcggtgacggacatctgcgtc
atcgtcaccagtaaaggggagataccgccacataccttctgcaaagtggagaagaacctc
aactgtggcatgtggggctccaatgtgttcctgtgttacaagaaatcggtgtctacgtcc
aattccatcagttacaaagccggtctcatcttccgatacccagaagaggactacgagtct
tttcctctgtcagaatcagtccctttgttttgtttgccgatgggcgccaagatcgagtgt
tgggatccaaacacacgcgatcctctgcctgtcttctccacgtttgtcttgaccagctcc
tctggtgaaaaggtgtacggagcagcggtccagttctacgagccgcatccggtggatcag
ttgagcgagaagcagaagatccagctgggtctgctcaccgccgtggagaagaaggtgatc
cccaaccggcccgtgaaaagcaataaatgcatctgcctgctgtcccgctggcccttcttt
gagtccttccggaagttcctgatcttcctctacaagctctccgtctccggccctcaaccg
ctgcctatcgaaaagcacatctcgcacttcatgcacaatgtgtcgtttccttcccctcaa
aggccaagaatattagtccagctctcggcacatgacaacttcatcctctcccagcctgtg
tgtacacccttgccgctcagcggggcggactacggcactttgctgatgaacctgggctcg
gagaactgcgccacgctgctgcacttcgtcctgctggagagcaagatcctgctgcactcg
ctccggcccgccgtgctcaccggagtggccgaggccgtggtggctatgatcttccccttt
cagtggcagtgtccctacatccccctgtgcccactttcgctagcaggcgtcctgaacgct
ccctgtccgtttatagtgggcgtggactcccgctacttcgacctttacgaccccccgcca
gatgtcgtctgcgtggatctggacaccaacacgatctatctttctgacgaaaagagacac
ggcaactggaagaacctgccaaagaagcccggcaagagtctcattaacgcactgagcaac
ttgcaccagcagctggccaccgtttcaggacctcaaatggaacaggaaaattctgcagtg
gacatgacccccatagaggcggacttcacttggcacaagaagaagacttctctggagatg
gaaatccaggaggtcttccttcgcttcatggccaccatcctgagaggctaccgcaactac
ctcaaacccatcacccaggagccctcggtaaaggccacagccgcagactccctctacgac
ctgcaagggcttctcaaaagcagagaccgagcccaccagaagttctactcccagctcacc
aagacccagatcttcatccgcttcatcgaggagtgcaccttcgccagtgacaaggacacc
ggcctggccttttttgacgactgtgtcgagaagctttttccctctgataaaatcaccgac
aagggcaccaaggttgaaggagagtcgtctgaggacacgcgactgttggagctggacgag
tcccagaagagcgaacacaccgttttcgtcatgccccctgagcctccagtcagcgatggg
acggaacctgcctccagatacacctataacagtttcccccggctgcacatggagctgttc
gaccgtcctcgggagttccgcccggtgctcagcagcagaccgacaggagccagtctccta
ccggctaagaggacgaagcaggagatcaagctcgcgtacaagatggcgaagcatttccac
gccgaccctccgccgtgggcccgctgcctgttcagtcactgctacagcctgtggttcatc
tgcctgccaacggctgtgcgacactccaagtctaaaagccgggccatgcagcaggcgtac
aacgtcctcctgaagatgaggaccactgaggtggaggtgctggatgaggtgtgttacaga
gtggtgatgcatctctgttgcgtgtggggtcttcccgtcatggccgtacgagtcctggtg
gagatgaagagagccggagtgcatccaaacgtcatcacatatggattctacaacaagacc
gtcttggagagcccgtggccgagcgcaaaccgcagtggcctctttatgtggaccaagctc
cgtaatgtggttcgtggagtgtcccagttcaagcacgttccagaccgaacaccttccaag
aaggaacccaccacagcaccgtcgaccggtgggtcagcggtcgctgacgctgaccgcttg
agtcacggaagtgctgacagctcaagtgaagtcaacggtgaagaacgcaaccgattcgcc
cacagccgcggcatggaagacacggcagacaaccactgcggcacagggcgtcagtctgac
caaggctacggctccaaggacgagttacaccaggagctgatggagcattctgctgccctt
tccacggagggaagaaacgatcccagagcccagcataccggaggggacgttgctgtctcg
gtggacagtgccgtcgcggtagcagagccccccagtcctgttgatgttccctcgcctgtc
cccagcattgtgaaactgtcggggagccttgatagcggcagggaaacgggttcagggaag
ctgttcaggagactcagcaagaccgataacgtgtctctccctgaagacgacgcctcgctg
ccgccaggggacgcagccaaccagcctcaacagcagcggcagaagtcctttgccgagcgc
agctgcagcttcagcgccgaaacccgagacgggatgctcctcgagaaaggcgtggaccac
atggccagtcagatgggtgccgatgcccggatcctggctgcagcgctctgtccaggccta
actccaccccctaatagtgtgtccaaagcactttttaaagacctggaggaagagcctgaa
gacgatccgggcctggcattagggaagctgccagaggaagacggagcggcggcagaagaa
ggaaagggagaggatgaagaggtagacggggccgagttaaaaatgggggaacgagagagg
aagcacactgaaacgagcgaggacaaccctgggctgcgagtgccgactctggagagggcg
gacgtggaagcgggcgccgacccactttccctcctggtgaccgagagcgacgagtcggcc
tccgtcggcagcctagagccgccgcgctccgtgcctgctgtggtgtcccgcaacctggcc
gaggagatcgaaatgtacatgagcctgaggagccccccgagcgtcaagtcctccagcatg
gagctccagcaggccccgggagactgcgccgaccccccacagcccacgcagtctctggag
cgcagggcgagcctccctgtgcctcccgtcaaaactccgaccggctccccgggcgacacg
cccaaacgcagccccaccgccgtcactcgctccaagactttcgcgacgaagacgaagacc
cccagcagcgcgacggggagcccgggccctcgatcgtcctcgctgacggcgctggtcaag
tcctcccagggagggtcattgggctccgtcatcaactccttctcagccatcaagatggac
cacctcctgtcgggaccgaagatagacgtgtttaaatcgagcatgaaacaggcggcaaat
gtggccagcaaagtgtggggagcggttgcttctgcctactcatactcagatgacgaggaa
gaccaagctcagggtggcggcggcggcttcccagcccatctggatgagcacacgctggct
gcagatgagagcccagagagaggagccatcccggggctggtggccaacggtctcaaccag
agctgcaccagcctgggcagcagcagtggcagcagtgacacgggccgagggacccacccg
acacacccaactcctggccgagcaggcaggggtccagactccgagcaaggctctttacat
cacgcttcctcctcgagcatttaccagaactgtgcattggaggtgctgatgtccagctgc
tcccagtgccgctcttgtgaagccctggtgtacgacgaggagataatggccggctggaca
gccgatgactccaacctgaatagcgactgtcccttctgtggcacagccttccttccctta
ttgcacgtcgagtttcacgacttgcggacgatgaccgggttttacatcaatcccagtgcc
tcaggagacagtatccacagcaccagtacccagcccatagccagcagctcagccgacatc
aagacaacagaacttatcactttccccgaggaggaacctcgggagactccagacaacctg
cctgttgcacatacgagtctgattccagagccggcgcaatcggaccccttaggtctcctg
gagcaccaggcagcgcggcagcagcgtagctgcagcgggacgtcgctgacgcgcagcaac
agtgtcggcggcccgctgcagagcctggactactccccgagacccggacacggcgtctcc
accaccagcctgccctgcagcctgcaagcggtgtcggacggcatggggaccaaaaggccg
aaccccaagcctgtgtcagtcccgtacctcagccccctggtgctgcgcaaggagctggag
accctgttggagaacgagggcgatcaggtgatctacacccacaagttcctcagccagcac
cccatcatcttctggaacctggtttggtatttccgtcgcctggaccttcccactcaccta
cctggcctcatcctaacctctgaacactgcaacaatggcgtacagcttcccctgacgtca
ctgtcccaggacaataagcaggtcttcgtccagctcctgtgggacaacatcaatctacac
caggaacatggagagcccctctacctgtcctggaggaccttgttggagaagaaggggatg
ctggctcccacagaccaccaggagattcgtaccctcctcaacacgattgttcgcaacatc
cagaccaacgacatctacgggccaatcaacctgttgatccgagagatcaaacagcggcca
gagggagtcaaaaggcaaaggagtatctatagagaaatattgttcctctccctggtggcg
ctggggaaggaaaacatcgacgtggaggccttcgacagggagtaccgcttggcttacgag
gaactgagcgccgagcagctcaagtccttgcaccgcatcgatgaaccgcccagccccaac
gtccagtggtgccttaaatgcttcgggacccccatcatctga
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