Pseudoliparis swirei (Mariana hadal snailfish): 130211710
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Entry
130211710 CDS
T09868
Name
(RefSeq) zinc fingers and homeoboxes protein 1-like isoform X1
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130211710
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
130211710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Homez
zf_C2H2_ZHX
zf-C2H2_7th_ZNF462
zf-H2C2_5
zf-C2H2_ZNF462_11
Motif
Other DBs
NCBI-GeneID:
130211710
NCBI-ProteinID:
XP_056298679
LinkDB
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Position
1:complement(21015925..21039694)
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AA seq
907 aa
AA seq
DB search
MASRRKTTTPCMVPPREAVDSDQEMEDVGDAPEPDDGGAAAIFPEPPEEAGEDSGPGSTP
DLYLDANMAEGGYECKYCSFKTAELKLFTLHVDQEHPDVVTNTSYVCMECDYHTKSYDTL
LAHNARLHPGAGAFRRTMVRRSHETVFRQSVKQEDEAASRRIALSQTPIMRSRGRPELNK
FAGLHKMAAADVIKVESEEDEEPPAPSPAPAFAAAPRLVPVSAPVQVHAVPQSIVVNGSN
LLQIKGGGVLPPGTLAQVLSALQNQQNCSQTQLLIPISSIPTYNTAMDNNVLLVSAYNRF
PYPSLSEVLGLSSQTKFSEEQIKVWFSAQRLKHGVSWTPEEVEEARRKKFNGMVQAVSQT
ITVIPANMAAGGLQSIFHTCQIVGQPGLVLTQVSGGGSAVPVAAPITLTVAGVPGNRPKA
AEPSATESKTETLSAGAVRGPDAAAAPSSSKPKKSKEQLAELKASYGRRQFATEAEISRL
MQVTKLSKRAIKKWFSDTRYNQRNAKDHHGVPLGEAPPTKLRGARSGLDDDSGGASTIVV
IDSSDDASDCSPPAARDPRVKFRHAFPDFTPQKFKEKTAEQLLVLEASYQGCSTPPDEEL
GRLRGATKLTRRELDAWFTERRKTPSKEEEEEDEEDEDESRSTPPSGRKSLKKTTEQLHF
LKKAFVRSQWPTAAEYDVMAADSRLPRSYIVNWFGDTRYACKNSNLKWFYLYQSGKVDEA
LNGEVKTQKKSRKRFRGWSRRTRRPYPCKRSSPQGGATPIKVKSGQQFLKDYFLRHRVLS
EKDLDDLVSKSSMSYEQVRDWFSHTARRVEEGRGPFSDEEVEGEEDDEEEEVGRGEEEEA
AEQTADSEGEMEVKEQGQEATDEDCNEEVEEEVQEEQEEQEEEEDEEVIQEDPKGDSQSQ
PEAEEQT
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccggaggaagaccaccaccccgtgcatggtcccccctcgggaggccgtggac
tcggaccaggagatggaggacgtcggcgacgcgcccgagccggacgatggcggcgcggcg
gccatcttccccgagccgccggaggaggcgggcgaggactcgggacccgggtccacgccg
gacctctacctggacgccaacatggcggagggcggctacgagtgcaaatactgcagcttc
aagacggcggagctcaagctgttcacgctgcacgtggaccaggagcaccccgacgtggtc
accaacacctcgtacgtgtgcatggagtgtgactaccacaccaagagctacgacaccctg
ctggcgcacaacgctcgcctccacccgggcgcgggcgcgttccggcgcacgatggtgcgg
cgcagccacgagacggtgttccggcagtcggtgaagcaggaggacgaggccgcgtcgcgc
cgcatcgcgctcagccagacgcccatcatgaggagccgcggccggccggagctcaacaag
ttcgccgggctgcacaagatggccgccgccgacgtcatcaaggtggagagcgaggaggac
gaggagccgccggcgccgtctcccgccccggcgttcgccgcggcgccgcgcctcgtcccc
gtctccgcgcccgtgcaggtgcacgccgtgccgcagagcatcgtggtcaacggctccaac
ctgctgcagatcaaaggcggcggcgtgctgccccccggcacgctggcccaggtgctgtcg
gcgctgcagaaccagcagaactgcagccagacgcagctcctcatccccatcagcagcatc
cccacctacaacacggccatggacaacaacgtcctgctggtcagcgcctacaacaggttc
ccgtacccttcgctgtcggaggtcctcggcttgtcgtctcagaccaagttcagcgaggag
cagatcaaagtctggttctccgcccagaggctgaagcacggagtcagctggacgccggag
gaggtggaggaggcgcggaggaagaagttcaacggcatggtgcaggccgtctctcagacc
atcaccgtcatccccgccaacatggccgccggcgggctgcagtccatcttccatacgtgt
cagatcgtgggccagccgggcctcgtgctcacgcaggtgtcgggcggcgggagcgccgtg
ccggtcgccgcccccatcaccctgacggtggcgggcgtccccggcaaccggcccaaagcc
gccgagccgtcggcgaccgagtccaagacggagacgctgtcggccggcgcggtgcgcggc
ccggacgccgcggcggcgccgtcgtcctccaaaccgaagaagtccaaggagcagctggcg
gagctgaaggcgagctacggccgccggcagttcgccacggaggcggagatatcgcgtctc
atgcaggtcaccaaactctccaagcgggcgatcaagaagtggttcagcgacacgcgctac
aaccagaggaacgccaaggaccaccacggcgtgccgctgggcgaagccccgcccaccaag
ctgcgaggagcgaggagcggcctcgacgacgacagcggcggcgcctccacgatcgtggtc
atcgactccagcgacgacgccagcgactgctcgccgcccgccgcccgcgacccgcgcgtg
aagttccgccacgccttccccgacttcacgccgcagaagttcaaggagaagacggcggag
caactgctggtgctggaggcgagctaccagggctgcagcacgccgccggacgaggagctc
ggccggctgcgcggcgccaccaagctgacgcggcgcgagctcgacgcctggttcaccgag
aggaggaagacgccctcgaaggaggaggaggaggaggacgaggaggacgaagacgagagc
cggagcacgccgccctccggcaggaagtcgctgaagaagacgacggagcagctgcacttc
ctgaagaaggccttcgtgcggtcgcagtggccgacggcggcggagtacgacgtgatggcg
gccgacagccggctgccccggagctacatcgtcaactggttcggagacacgcgctacgcc
tgcaagaacagcaacctgaagtggttctacctgtaccagagcggcaaggtggacgaagct
ctgaacggagaagtcaagacccagaagaagtccaggaagcggttccgcggctggtccaga
aggacacgccggccctacccctgcaaacgctcgagcccacaagggggcgccacccccatc
aaggtgaagtccgggcagcagttcctgaaggactacttcctgaggcaccgagtcctgagc
gagaaggacctggacgacctggtctccaagtccagcatgagctacgagcaggtcagggac
tggttctcacacaccgcccgccgggtggaggagggccgggggcccttcagcgacgaggag
gtggagggagaggaagacgacgaagaggaggaggtggggcggggggaggaggaggaggct
gcagaacagacagcagacagcgaaggagagatggaggtgaaagaacaaggacaagaagcc
actgatgaggactgcaatgaggaggtggaggaggaggtgcaggaggagcaggaggagcag
gaggaggaggaggatgaagaagtgatccaggaggatccgaaaggtgacagccaatcacag
cccgaggcagaggagcagacatga
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