Pseudoliparis swirei (Mariana hadal snailfish): 130211822
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Entry
130211822 CDS
T09868
Symbol
clcn3
Name
(RefSeq) H(+)/Cl(-) exchange transporter 3 isoform X1
KO
K05012
chloride channel 3/4/5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130211822 (clcn3)
Ion channels [BR:
pswi04040
]
Chloride channels
Chloride channel (CLC)
130211822 (clcn3)
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GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
130211822
NCBI-ProteinID:
XP_056298789
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Position
21:complement(4773473..4801627)
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AA seq
888 aa
AA seq
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MEPAPSWTSTPPRTTTCWTGTPPPQFLLPAVPLEMRLHSKRVLVAPPPPPPPRLRADVAL
SFLSGSNYVMSNGGGAPSSTAHLMDFLEEPIPGVGTYDDFHTIDWVREKCKDRERHRKIN
SKKKESAWEFTKCLYDAWSGWLVVTLTGLASGALAGLIDISADWLNDLKEGVCLSAMWFN
HEQCCWTSNETTFAERDKCPQWKSWAELILGQAEGPGSYIMNYFMYIYWALSFAFLAVSL
VKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLLIKTITLVLAVASGLSLGKEGPLVHV
ACCCGNIFSYLFPKYSKNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKT
LWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELIPFILLGVFGGLWGAFFI
RANIAWCRRRKSTRFGKYPVLEVIFVTAITAVVAFPNPYTRQNTSGLIKELFTDCGPLES
SQLCQYRSQMNGSKAFTDNLNPNRSAGPGVYTAMWQLCLALIFKIIMTIFTFGLKVPSGL
FIPSMAIGAIAGRIVGIAMEQLAYYHHDWFLFREWCEVGADCITPGLYAMVGAAACLGGV
TRMTVSLVVIVFELTGGLEYIVPLMAAVMTSKWVGDAFGRSGIYEAHIRLNGYPFLDAKE
EFTHVTLAREVMRPRQSDPPLAVLTQDDLTVEELQSTINETSYNGFPVIVSKESQRLVGF
ALRRDINIAIENARRKQEGILLTSRVYFTQHAPTLPADSPRPLKLRSILDMSPFTVTDHT
PMEIVVDIFRKMGLRQCLVTHNGNVLGIITKKNILEHLEELKQHKEPLAASWHYHKKRYP
PSHGSNGKPRPRVHHVQLIRSFQDGRGGGGGGSEEEEEEVHLLDGSNL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggagccggcgccgtcatggacttccacaccaccgaggacgacaacctgctggacgggg
acgccgcctccccagttcctgcttcctgcagttcctcttgagatgcgcctccactctaaa
cgtgtgctcgtggctcctcctcctcctcctcctcctcgcctccgggctgacgtggccctg
tctttcctgtccgggtctaactacgtcatgtctaacgggggcggggcgcccagcagcacc
gcccacctgatggacttcctggaggagcccatccccggtgtgggcacctacgacgacttc
cacaccatcgactgggtccgcgagaagtgcaaggaccgcgagcggcaccggaagatcaac
agtaagaaaaaggagtcggcatgggagttcacaaagtgcctgtacgacgcctggtctggg
tggctggtggtgacgctcaccggcttggcctcaggtgctttggctggcctgattgacatc
tccgccgattggttgaacgacctgaaggagggcgtgtgtctgagcgccatgtggttcaac
cacgagcagtgctgctggacgtccaatgagaccaccttcgctgagcgggacaagtgtcct
cagtggaagagctgggcggagctcatcctggggcaggccgaggggcccggctcgtacatc
atgaactacttcatgtacatctactgggctctgtccttcgccttcctggccgtgagtctg
gtcaaggtgtttgctccctacgcctgcggctcggggatccctgagatcaaaaccatcctg
agcgggttcatcatccggggctacctgggcaagtggaccctgttgatcaagaccatcact
ctggtcctggccgtggcgtccggcctcagcctggggaaggagggcccgctggtccacgtg
gcctgctgctgcgggaacatcttctcctacctcttccccaagtacagcaagaacgaggcc
aagaaacgagaggttctctcggccgcgtcggcggccggggtctccgttgcttttggcgcc
ccgattggaggcgtgctcttcagcttggaggaggtgagctactacttccccctcaagacg
ctgtggcgctccttcttcgccgccctggtggcggcgttcgtcctgcgctccatcaacccg
tttggaaacagccgcctggtgctgttctacgtggagtaccacacgccgtggtacctgttt
gagctcatcccgttcatcctgctgggcgtgttcggaggcctctggggcgccttcttcatc
cgggccaacatcgcctggtgccggcggcgcaagtcgacgcgcttcggcaagtacccggtg
ctggaggtgatcttcgtgacggccatcacggccgtggtcgccttcccgaacccgtacact
cgccagaacaccagcgggctgataaaggagctgttcaccgactgcggcccgctggagtcg
tcgcagctgtgccagtaccgcagccagatgaacggcagcaaggccttcaccgacaacctc
aaccccaaccggtcggcggggcccggcgtctacaccgccatgtggcagctgtgcctggcg
ctcatctttaaaatcatcatgaccatattcaccttcggactcaaggtgccgtcgggtttg
ttcatccccagcatggccatcggggcgatcgccgggcggatcgtcggcatcgccatggag
cagctggcctattaccaccacgactggttcctgttccgagagtggtgcgaggtgggcgcc
gactgcatcaccccggggctctacgccatggtgggggcggcggcgtgtctgggcggcgtg
acccgtatgaccgtctccctggtggtcatcgtcttcgagctgaccggcgggttggagtac
atcgtgcccctcatggccgccgtcatgaccagcaagtgggtgggcgacgcgtttggacgc
tcggggatctacgaggcccacatccgcctgaacgggtaccccttcctggacgccaaggag
gagttcacccacgtcacgctggccagggaggtgatgcggccgcggcaaagcgacccgccg
ctggcggtgctaacgcaggacgacctgacggtggaggagctgcagagcacaatcaacgag
accagttataatggtttccccgtcatcgtgtccaaggagtcccagaggctggtgggcttc
gccctgcgcagggacatcaacatcgccatagaaaacgcgcgtcgcaagcaggagggcatc
ctgctgacctccagggtctacttcacgcagcacgcgcccacgctgccggccgacagcccg
cggcccctcaagctgcgctccatcctggacatgagccccttcacggtcaccgaccacacg
cccatggagatcgtggtggacatcttcaggaagatggggctgcgccagtgtctggtcact
cacaacgggaatgttttgggcatcatcacaaagaagaatatattagagcatctggaggag
ctcaagcagcacaaggagcccctggcggcttcttggcattatcacaaaaaaagatatcct
ccgtcacatggctcaaatggcaaacctcgaccccgagtccatcatgttcaactgatccgc
tccttccaggacggccgggggggagggggaggcggcagcgaggaggaggaggaggaggtg
cacctcctggacggctccaatctctga
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