Pseudoliparis swirei (Mariana hadal snailfish): 130211987
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Entry
130211987 CDS
T09868
Symbol
slc1a1
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130211987 (slc1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130211987 (slc1a1)
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
130211987 (slc1a1)
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Motif
Pfam:
SDF
DUF5083
CENPU
Motif
Other DBs
NCBI-GeneID:
130211987
NCBI-ProteinID:
XP_056299013
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Position
21:17075914..17093856
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AA seq
522 aa
AA seq
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MMGNKERRGVNLKGLLKKNWLLIATIVSVLLGISLGVVVREYASLSHLHKQYFGFPGEIL
MRMLKLVILPLIISSMITGVAALDSEVSGRIGLRAVIYYFSTTIIAVILGIILVMTIKPG
VSQTAEHIDRAGTTPNVTTVDTLLDLIRNMFPENLVQACFQQYKTKRKELEPLKVSTNAT
TIPPLATTLMSVVENITKEYKIIGTYSDGINVLGLIVFCVAFGLVIGKMGKKGRILLEFF
DALNEATMRLVQIIMCYMPIGILFLIAAKIIEVDDWEIFKKMGLYMVTVLSGLAIHATIC
LPLIFFVIVRKNPYTFTLGMAQALVTALMISSSSATLPVTFRCAEENNRIDKRITRFVLP
VGATINMDGTALYEAVAAIFIAQLNDYALDVGQIVTISITATVASIGAAGVPNAGLVTMV
IVLTAVGLPANDVTLIVAVDWLLDRFRTMVNVLGDAYGAGIVQKLSKKELERMDLTSDAD
VANPFALEATLDDEECEKKSYINGGFTVDKTDAISFTETSQF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgatggggaacaaggagcgacgaggcgtgaacctcaaaggcttgctgaagaagaactgg
ctgctgattgccacgattgtctcggtgctgctcgggatcagtttgggtgtcgtggtcaga
gagtatgcgtcgctctcacaccttcacaagcagtatttcggcttcccaggagagatcctc
atgaggatgctgaagctcgtcatcctcccgctcatcatctcaagcatgataacaggtgtt
gcagccctggactctgaagtatcaggaagaataggtctgagagctgttatttattacttc
tcaacgaccatcatcgcagttattcttgggattattctggtgatgacgatcaaaccggga
gtgtctcagactgcggagcacatcgacagagccgggacgacgcccaacgtcaccacagtc
gacacgctcctggacctcatcaggaacatgttccctgaaaatctggtgcaggcttgtttt
cagcagtacaagaccaagcgcaaagaactggagcctctgaaggtttccaccaacgccacc
acgatcccacctctcgccaccacgttgatgtcggtggtcgagaacataaccaaggaatat
aagatcatcgggacgtattcggatggaatcaacgtcttggggctcattgtgttctgcgtc
gcttttggcctcgtcattgggaagatgggcaaaaagggacgcatcctcttggagttcttt
gatgcactgaacgaagcaaccatgagactagttcagatcattatgtgctacatgccaata
gggatcctgttcctaattgcagccaagatcatcgaggttgacgactgggagatcttcaag
aagatgggtctttatatggtgacggtgctgagtggtcttgctatccacgccaccatctgt
ctgccgctgatcttctttgtcattgtgaggaagaacccgtacacgttcacattgggcatg
gctcaggccctggtgaccgcactcatgatctcctccagctctgccaccttgcccgtcacc
ttccgatgtgccgaggagaacaatcggattgacaagcggatcacccgctttgtcctccca
gtgggtgccaccattaacatggatgggacagcgctgtacgaggcggtggctgccatcttc
attgcccagctgaacgactacgctctggatgtgggccagattgttactatcagtataaca
gcaacagttgccagcattggagcagcaggagtccctaatgctgggctggtcacgatggtg
attgtcttaacagctgttggattacctgcaaatgacgtcactctgatagtcgctgtggat
tggctgctggaccggttccgtaccatggtcaacgttcttggcgatgcttacggagccggc
atcgtccagaaactatccaagaaggaactggagaggatggatctgacgtctgacgcggac
gtcgccaaccccttcgctctggaggccactttggatgacgaagagtgcgagaagaaatcc
tacatcaacggaggtttcaccgtcgacaagacggatgcaatctccttcactgaaacctct
cagttttag
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