KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130211995
Entry
130211995         CDS       T09868                                 
Symbol
rpgrip1
Name
(RefSeq) protein fantom isoform X1
  KO
K16550  protein fantom
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pswi01009]
    130211995 (rpgrip1)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pswi03037]
    130211995 (rpgrip1)
Protein phosphatases and associated proteins [BR:pswi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130211995 (rpgrip1)
Cilium and associated proteins [BR:pswi03037]
 Primary cilia and associated proteins
  MKS complex
   130211995 (rpgrip1)
SSDB
Motif
Pfam: RPGR1_C C2-C2_1 FAF
Other DBs
NCBI-GeneID: 130211995
NCBI-ProteinID: XP_056299031
LinkDB
Position
21:complement(13471558..13483262)
AA seq 1351 aa
MDETAGDHPVRDVGLMRSGLMPTVPDTLRGVKTWKKHHAMKKKAEPQRLFRFPREHLEDL
CLRLQEENSVLRQHTRTQETRLRRSEKLTLATRRRTLGRRRMSTRLMRLRQLRPGSTGVK
ERDMEDTIQELEARAASLESQKEFLQSKLSLAKQHVLELGARTPYRPRRGKCTEVEGGVR
RAAQTAPPRYGPTLEDNVEEMERLRPGVTEQPRAAELELTAQTLRDTLREKEKEMEGTVR
DMRKQQADKHRITIRENVDLIRLQKQLSDKSTALRVTQEKFNSLQEAYENQLEERQRSLS
QSQGALLDKVEELSDQLKQERQRALELEGRLTTTTLSLHTLDKLQDSLSDLEGERDLIKE
NYDALLESTLSVQTSHNGEVERRREVSHRREEPGDHTDRMDIQRLEEMLQAERAARGRLE
LEKEKLRREKETLEEKRERGRESSGTTLDEREHLELQAFLYRKQISALQDRLDSVTKEFD
MSVEELSETLIQIKAFRMQQESRAGFGFLLADGAVEDSPRELVNIQASHAETILELQKTR
NLLLLEHHISKDLQEELNTVNQKMEREREESWRRISEKDKLLSKRALQINALQAQLKELA
YGPRTGKRTMPMQYTWPAGDQEVVEPIEEDMSRSQLRAGESLLEIHLKTATFTPAGLRTM
GSIHRQDMVTFCTYGLLDFEVHSTPLVSGGQPDYGFTSRYALTARDLGRLGAQGSGVRIE
LHQALGGVRFVTHGSGQMSIVGAMERKGEQVGGHVNITGSEGALVGVVDFWVRLFYPAEP
VDTERGADRRTAAQRGPVHVPLGWQDAGHEELRDYGGGIPNELVVALERCVGLTARWTGL
LPDAYLTYRLYDLQPHVSQTVRSTADPVFSDTTSYPLAVTSDVLHYLRSSSLLVYVFDDS
DDQMPPAYLAKTPIPLRAMATGREITGDYVLRDPAGGPRGTVRVLIQWKYPFQPSVDTVL
VRQGRQDVERSEKEERRKEEAKASQRPIAKPRVKQIQLLEPRETKAVQKGTKAVPRPPAV
KQKSSRNKRADQWTKRSTKRSPDLDQDTPRLTPEPRLATPSRLPTRKSSPTTLSRTSSAS
DARTQDLPSADHVSIDEEEDEVEERSESAAAGVGEVPESSESSSSQSDIVVIPPKRKMRN
GNKLRVEILCLSFEPSSRVALDKSVQRVYVEYRLLGVPMETTETPMSLRKPTKGEEVHYN
FTRVIYVDGSQSAPLRQHLYTMLEGTDPNQGRLKFTVVSEPMGDGEECVDVGHAFLDLQE
LLLTGDDVSDQQINVLSVDEDKEVIGNLKVSLEAAKALTGIYQEFHQRSETKKEDDTDEE
EEEEEEEKELKEKEEEKKDVIQIDYDDDSDF
NT seq 4056 nt   +upstreamnt  +downstreamnt
atggatgagacagccggggaccacccggtcagagacgtgggactcatgaggtctggactg
atgccaactgtaccagatactctacggggtgtgaagacatggaagaagcatcatgccatg
aagaaaaaagcagagcctcagcgcctgtttcggtttcccagagagcacctggaggacctg
tgtctcaggctgcaagaggaaaacagcgtgctaagacaacacactcgcacacaggagacg
aggttacgcaggtcagagaagctgacgctggctacccgacggaggacacttgggcggagg
aggatgtctaccaggctgatgcgtctccgtcagctccgccccggctccaccggtgtgaag
gagagggacatggaggacaccatccaggagctggaggcccgcgcggcttcactggagagc
cagaaggagttcctgcagagcaaactcagcctggccaagcagcacgtcctggagctgggg
gcccgcacgccgtaccggccccggagaggtaaatgtacggaagtggagggcggagtcagg
agggcagcccagactgccccgcctcgctacggccccacactggaagacaacgtggaagag
atggagagactcaggcccggtgtaaccgagcagccgagggcggcagagctggagctgact
gcgcagacgctcagagacacactgcgagagaaagagaaagagatggagggaactgtgaga
gacatgaggaagcagcaggctgacaaacacagaataactattagagagaatgtggatctg
atccgtcttcagaagcaactgtcggataagagcaccgctctgagagtcacccaggagaag
ttcaacagcctgcaggaggcatatgagaaccagctggaggagcgtcagaggtcactgagc
caaagccagggagctctgctggacaaagtggaggagctcagtgaccagctgaagcaggag
agacagagagcgctggagctggagggacggctcaccacgaccaccctgtcgctacacacc
ctggacaagctacaggacagtttgtcagacctggagggagagagggatctaataaaagaa
aactatgacgctctattagaaagtacgttatccgtgcaaaccagtcacaatggcgaggtg
gaacgacgtagagaagtgagccacaggagggaggaaccgggagatcacaccgacaggatg
gacatccagagacttgaagaaatgctgcaagcagagcgggcggcgagaggcaggctggag
ctggagaaggagaaactgagacgagagaaggagacattggaggagaagagggagcgagga
agagagtcttctgggacgacgctagacgagcgagagcatctggaacttcaggctttcctg
tacagaaagcagatttctgctctacaggacagactggactctgtcacaaaggagtttgac
atgagtgtcgaggagctcagtgagactcttatacagatcaaggcatttcggatgcagcaa
gagagcagggcggggtttggttttctcttggccgacggcgcggtggaggattcgccccgt
gagctggtaaacatccaggcgtcgcacgctgagactattctggaattacagaaaaccaga
aaccttctgctgctggagcaccatatcagtaaagaccttcaggaagagttgaacacagtc
aaccagaagatggagagagagagggaggagagctggaggaggatctcagagaaagacaaa
ctgttatcaaaaagagctcttcagatcaacgctttacaagctcagttgaaagagttggca
tacggccccaggaccggcaagcggaccatgccaatgcagtacacctggccagctggagac
caggaggtggtagagcccattgaggaggacatgtctcgatctcagctgagagccggggag
tcgctgttggagatccaccttaagaccgccaccttcaccccagcagggcttcgtaccatg
ggcagcatccaccgtcaagacatggtgaccttctgcacctacggccttttggactttgag
gtgcactccacccctctggtgtcaggcggccaaccagactacggcttcacgtcgcgctac
gccctcacggcccgagatctggggaggctgggagctcaggggtcaggggtcagaatagag
ctccaccaggcgttaggaggggtcaggtttgtgacacatggaagtgggcagatgtccatc
gtgggtgccatggagcggaaaggggagcaagttggtggccatgtcaacatcacaggctcc
gagggtgcgcttgttggcgttgtggatttctgggtgcgcctgttttacccggcagagccc
gttgacaccgagagaggagctgacaggagaaccgcggcgcagaggggtcctgtgcacgtc
cctctcggctggcaggatgctggtcatgaggagttacgtgactatggtggggggatcccc
aacgagctggtggttgcgttggagcgttgcgtgggtcttactgcccgctggaccggactt
cttcctgacgcctacctgacgtacaggctgtacgacctgcagcctcacgtctctcaaacg
gtccggtccaccgctgaccccgtgttcagtgacaccaccagctacccgctagctgtaaca
tctgatgtgttgcactacctgaggtccagcagtttgttggtgtatgtgttcgatgacagc
gatgaccagatgccgccagcctatctggccaagacccccatcccactgcgcgccatggcc
actggcagggagatcacaggtgactatgttctgagggatccagctggtggccctcggggc
acggtcagggtcttgatccaatggaagtacccctttcaaccatcagtggacactgtgctg
gtgagacagggaagacaggacgtggagagatctgagaaggaggagaggaggaaagaggag
gctaaagcatcacagaggcccatcgccaagcccagagtgaagcagattcagctactggag
ccgagagaaaccaaagcggtgcagaaagggaccaaagccgtgccgcggcctccagctgtg
aaacagaaaagttcacggaacaaacgagcggaccaatggacgaagagatccaccaagagg
tcacctgaccttgaccaggacacgccccgcctcacgcctgagccgaggctggccacgccc
tctcgtttgccaacaagaaaatcttcacccaccacactgtcgaggacgagctcagccagc
gatgccaggactcaggacctcccctctgcggatcatgtgtcaatagatgaagaggaggat
gaagtggaggagaggagtgagagtgcagctgcaggagtcggtgaagtccccgagtcttca
gaatcaagttcctcacaaagcgacatcgtcgtcatcccaccgaaacggaaaatgaggaat
ggcaacaagctgagggttgagatcctgtgcctgtcgtttgagccgtcgtcgcgcgtggcg
ctggacaagtcggtgcagcgcgtctacgtggagtaccggctgctgggcgttcccatggag
acgacagaaacacccatgtccctccgcaagcccacgaagggagaggaggttcactacaac
ttcacacgagtgatctatgtggatggttcccagtcggctccactcagacagcatctctac
accatgttggagggcactgatcccaaccagggcaggttaaagttcaccgtcgtcagcgag
ccgatgggcgacggtgaggagtgcgtggatgtcggacacgcttttctggacctgcaggaa
ctgctgctcactggagatgatgtcagcgaccaacagatcaatgtgctgagtgtggacgag
gacaaggaggtgatagggaatctgaaagtgtctctggaagcagcgaaagctctgacgggg
atataccaggagtttcaccagagaagcgagacgaagaaagaagatgacacagatgaagag
gaggaggaggaggaggaggaaaaagaattaaaggagaaagaggaggagaagaaagatgta
atccagatagattatgatgatgatagtgatttctga

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