Pseudoliparis swirei (Mariana hadal snailfish): 130212065
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Entry
130212065 CDS
T09868
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130212065 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130212065 (dysf)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Others
Ferlins
130212065 (dysf)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130212065 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
Ferlin_C
FerB
FerA
FerI
Pex24p
CEP76-C2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
130212065
NCBI-ProteinID:
XP_056299165
LinkDB
All DBs
Position
21:complement(3992101..4049808)
Genome browser
AA seq
2136 aa
AA seq
DB search
MLRGFILCAERLQTPDDDISDSYCTVTYEGCKKKTKVVKNNCNPVWNEGFEWDLKGAPLE
PGAELHCVVKDHEKMGRNRFLGETRLALRDVLNSPNLAATFTVSLMDTKRNITGATLTLQ
VSYVPPPGSAAMYQPPPHPEAPSHNINNPNVELDTLTVISLDTLGEEDTESMIMLEPAED
QGPDDGRSMAATGPQGGPSGLESPTAQTPKRSPPAYNAHGGLRKRRRGASGQTKPLANKP
QDLQVRVRIIEGRQLPGINIQPVVKVTVAGQSKRTRIRKGSSPYFDETFFLNFFETPADL
FDEPVFITVCDSRSLRNDAVIGEFKLDVGTVYNEHRHCFLRKWLLLCDPDDLSAGVKGYL
KVSLLVLAAGDEPPPDKRECVEDKEDIEGNLLRPAGLSLRGATFTLRIFRAEDLPQMDDA
FVDGMRQIFGFDSNRKNLVDPLVEVHFAGKTVCTKVLEKNANPQWNQSLVMPIRFPSMCE
KMRIRILDWDRASHNDVIGTTHLCMSKISAPGGQIDDDLTPRTVHSGIDDSLGFLPTFGP
CFVNLYGSAREFTAFNDPHEALNLGKGEGVAYRGRVLLELTTKLEDKPEQKSEDIPPDDL
LVVEKFLRKRKFSLFVAFYSATLLQDVDDAVQFEVSVGNYGNKFDYTCLPLASATQFSRA
VFDGCHYYYLPWGNVKPVVVLSSEWEDIRPRIEALNMLLAIIERLEANLQRVQLDVKAGG
DLEEVELRVVELLDQVITDCSEELPSLDQWQCSTPLDRSLRHVRELHLAQVVSAARALKH
GPATELSAVLEQAEDWAGRLRGLAEEPQNSLPDIVVWMLQGDRRVAFHRLPAHTVMFSQQ
HGGKHCGQLQSVFLKNPQGGVGEAKLAGQLRLKVWFGLAADVKHFNRYAEGKLSVFAETY
ENQTRLALVGSWGTAGLTYPKFSDVTGRVKLPKESFRPSPGWAWAGDWCISPERTLLFDV
DAGHMTFSEEVFENQMRLPGGQWIGMPEGYTDVNGEKAVPKDEVECPPGWVWEEVEWSED
LNRAVDDHGWEYGIPIPPDRRPKSWVPAEKMYHTNRRRRWIRMRRRDQQKMEALRKQRPD
EAEREGWEYASLFGWRFHLKPRKTDSFRRRRWRNRMEPLEKTGPAAIFALECSLSSIEDK
NEDKSITTTFGVNRPTISCFFDCGTRYHLRCYLYQARDLLAMDKDSFSDPYAIVSFLHQS
QKTVTVRNTLNPTWDQTLIFYEVEIFGDLEATIAAPPNVVVELYDQDTYGADEFMGRCVC
PPTLTASPQLAWFPVRRGDKNAGELLAAFELIRREKPSIHHIPGLEGDIMTSTHVLDELM
FPGFISENLQQWPEESDLPPPPPQREPNVFVVPQGIKPVLQRTAIEVLAWGVRNLKSFQL
ASITSPSLQVECGGVTLQSCVIRSMKKKPNFDVNTFVLDVRLPREDLYMPPIVIKVIDNR
QFGRKPVVGQCSIRSLEEYRCTPEEEEEEEEEEGWRRETPQATSGEVFIDIDDQEPLMPD
QLADGSGSALINLSSSSCSLHAEELMDWWSKFYASTGEKNKYGTYLERGLDTLTVYDREL
EKVEGFQGLSDFCQTFKLQRGKTREEGEDPTVVGEFKGMFKIYTLPEDPSDPAPPRQFRK
LPPNGVEECLVRVYVLQAQGLQPKDANGKCDPYVKITLGKQTISDHENYIPSTLDPVFGK
MFELTASLPLEKDLRVMLYDHDMLTKDEKIGETLIDLENRFLSRHGASCGVPRSYSLSGV
NRWRDQLTPRQLLSRVCERRNLKKPVYHEEEVHFRGERYTAADLQEDKNVSRRHLGPLKE
RLSLLILRKLGVVPEHVETRRLLSPLQPDIEQGRLMMWVDLFPKSLGPPGAPFNVTPRKA
NKFFLRCVIWNTSDVILDDVSVSGERMSDIYVKSWMDGHEHSKQKTDVHYRSLGGEGNFN
FRFLFPFHYLPAEQLCVFDRKEHFWSLDKAETKLAPKLTVQIWDNDKFSFDDYLGHLVLD
LNRMLRPAKAPEGCGLQLTEQPAERLVSLFQQKTVRGWWPCTCERGGEKVIAGKVEMSLE
IVTEQEHEERPAGPGRDEPNMNPHLEEPQRPETSFLWFSSPFKTLRFILWRRFKWFIILF
IVLFFLFLFFSVFLYSFPNYVAMKMVGPFGPAKAAE
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgggttcattctgtgtgcagagcgtctgcaaacgccggacgatgacatcagc
gattcctactgcaccgtcacctatgaagggtgtaagaagaagacgaaggtggtgaagaac
aactgtaaccccgtgtggaacgagggcttcgagtgggacctgaagggggcccccctggag
cccggggccgagctgcactgcgtggtgaaggaccacgagaagatgggcaggaacaggttc
ctgggggaaacccggctggctctcagagacgttctcaactctcccaacttggccgccacc
ttcaccgtgtcgctgatggacaccaagaggaacatcacgggggccacgctgaccctgcag
gtttcctatgtgcctcctccgggatcggctgcgatgtatcagcctcctccgcatcctgaa
gctccatcccataatatcaacaaccccaacgtggagctggacaccctcacggtgatttct
ctggacacgctgggcgaggaggacacggagagcatgatcatgctggagccggcggaggac
caggggcccgacgacgggcgctccatggccgccacggggcctcagggggggccctcgggc
ctcgagtcccccacggcacagacccccaagcgctcgccgccggcctacaacgcccacggg
ggcctgaggaagaggaggaggggagccagcggtcagacgaagccgctggccaacaagcct
caggacctacaggtgcgcgtgcgcatcatcgagggccgccagttgccgggcatcaacatc
cagcccgttgtcaaggtaacggtcgccgggcagagcaagaggacccgcatccggaagggc
agcagcccgtacttcgacgagaccttcttcctcaacttcttcgagacgccggcggacctc
ttcgacgagcccgtcttcatcaccgtgtgtgactcccgctcgctcaggaacgacgctgtg
atcggtgaattcaagttggatgtgggcaccgtctacaacgagcacagacactgcttcttg
aggaagtggctgctgctgtgtgaccccgacgacctctccgccggggtcaaaggttacctg
aaggtcagcctgctggtgttggcggccggcgacgagccaccgcctgacaaacgcgagtgt
gtggaagacaaagaggacatcgagggaaacctgctgagaccggccggcctgtctctgaga
ggagccacgttcaccctgaggatcttcagagccgaagacctgccgcagatggacgatgcc
ttcgtggacgggatgaggcagatcttcgggttcgacagcaacaggaagaacctggtggat
cctctggtggaggtccacttcgccgggaaaaccgtgtgcaccaaggtcctggagaagaac
gccaacccccagtggaaccagagcctggtgatgccgatccggtttccctccatgtgtgag
aagatgaggatcaggattctggactgggacagagcgagtcacaatgacgtcatcggcacc
acccacctctgtatgtccaagatctccgcccccggtggacagatagacgatgacttgact
ccacggaccgtccactctggcattgacgacagtctgggcttcctgccgacgttcggcccg
tgcttcgtcaacctgtacggcagcgcccgcgagttcacggccttcaacgacccgcacgaa
gccctcaacctcggaaagggagagggcgtggcctaccgagggcgagtgttactggagctg
accacgaagctggaggacaagccggagcagaagtctgaagacatcccgccggacgacctg
ctggtggtggagaagttcctcaggaagcgtaagttctccctcttcgtggcgttctactcg
gccacgctgctccaggacgtcgacgacgccgtccagttcgaggtcagcgtcggtaactac
ggcaacaagtttgactacacctgcctccccctggcctccgccacccagttcagcagggcc
gtgttcgacggctgccactactattacctcccgtggggcaacgtgaagccggtggtggtc
ctgtcctcggagtgggaagacatccgcccgaggatcgaggcgctcaacatgctgctggcc
atcatcgagcggctggaggccaacctgcagcgggtgcagctggacgtgaaggcgggcggc
gacctggaggaggtggagctccgggtggtggagctgctggatcaggtgatcacggactgc
agtgaagagctgccctccctggaccagtggcagtgctccacccctctggaccgctccctg
aggcacgtccgtgagctccacctggcccaggtggtgtcggcggcccgcgccctgaagcac
ggcccggccacggagctgagcgcggtgctggagcaggcggaggactgggccggccggctc
aggggcctggccgaggagcctcagaacagcctcccggacatcgtggtgtggatgctgcag
ggcgaccgccgcgtggcgttccaccgcctgccggctcacaccgtgatgttctcccagcag
cacggcgggaaacactgtggacagctgcagagcgtgttcctcaagaacccacagggcggc
gtaggagaggccaaactcgctggtcagctgaggctcaaagtctggttcggtttggccgcc
gacgtcaaacacttcaaccgatacgccgaggggaagctgtccgtgttcgccgagacgtat
gagaaccagacccgactggccctggtgggcagctggggaactgcaggtctgacctacccg
aagttcagcgacgtcacggggcgggtcaagctgcccaaggagagcttcaggccgtcgccg
ggctgggcctgggccggggactggtgcatcagccccgagaggacgctgctgttcgacgtg
gacgccggtcacatgaccttctcagaggaagtgttcgagaaccagatgaggctaccgggc
gggcagtggatcggcatgccggagggctacaccgacgtgaatggggagaaggcggtgccg
aaggacgaggtggagtgtcctcctggttgggtctgggaggaggtggagtggagcgaagat
ctcaacagagctgtggatgatcacggctgggagtacggcatccccatccccccagaccgc
cggcccaagtcgtgggtgccggcagagaagatgtaccacaccaaccggaggcggcgatgg
atacggatgaggaggcgggaccagcagaagatggaggcgctccgaaaacagcggccggac
gaggcggagagggagggctgggagtacgcctccctgttcggctggaggttccacctgaag
ccccgcaagacggacagcttccggaggcgcaggtggaggaaccgcatggagccgctggag
aagacgggcccggcggccatctttgctctggagtgttctctgagcagcatagaagacaag
aatgaagacaagtccatcacgaccacgttcggagtcaacagaccgaccatttcctgtttc
ttcgactgcggcacccgctaccacctgcgctgctacctgtaccaggccagagacctgctg
gcgatggacaaggacagcttctcagacccctacgccatcgtgtccttcctccaccagtcc
cagaaaacggtgacagtacgtaacaccttgaaccccacgtgggaccagacgctcatcttc
tacgaggtggagatcttcggcgacctcgaggccacgattgccgctccgcccaacgtggtg
gtggagctgtacgaccaggacacatatggtgcggatgagttcatgggccgctgtgtgtgc
ccccccaccctgaccgcctccccccagctggcctggttcccggtccgcagaggggacaag
aacgccggcgagctgctggccgccttcgagctcatacgcagggaaaagccctccatccat
cacatcccaggtctagagggagacatcatgacctccacccacgttctggacgagctgatg
tttccaggattcatctctgagaacctgcagcaatggccggaggagtcggacctccccccc
ccgcccccccagagggaacccaacgtcttcgtggttcctcagggaatcaaaccggttctg
cagagaaccgccatcgaggtgttggcgtggggcgttcgcaacctgaagagcttccagctg
gcgagcattacctccccgagcctgcaggtggagtgcggcggcgtcacgctgcagagctgc
gtcatccgcagcatgaagaagaagcccaacttcgacgtcaacacgttcgtcctcgatgtg
aggcttccccgagaggatctctacatgccgcccatcgtcatcaaagtcatcgacaaccgg
cagttcggcaggaagccggtggtcggccagtgctccatccgctcgctggaggagtatcgg
tgcacgccggaggaggaggaagaggaggaggaagaggagggctggagacgagagacgccg
caggcgacgagcggcgaggttttcatcgacatcgacgaccaggagccgctgatgcccgac
cagctggcggacggatctggctccgccctcattaacctctcctcctctagctgcagcctc
catgccgaggagctcatggactggtggagtaagttctacgcctcgaccggagagaagaac
aagtacgggacgtacctggagagaggcctggacacactgacggtgtatgaccgggagttg
gagaaggtcgagggtttccaaggcctctctgacttctgtcagacgttcaagctgcaaaga
ggaaagactcgggaggaaggggaggatccgacggtggtgggagagttcaagggtatgttc
aagatctacaccctgccggaggacccctctgaccccgccccccccaggcagttcagaaag
cttccccccaacggcgtcgaggagtgcttggtccgagtctacgtcctccaggctcagggg
ctgcagcccaaggacgccaacgggaagtgtgacccctacgtgaagatcactttggggaag
cagaccatcagcgaccatgaaaactacatcccctctacactggaccctgtcttcggaaag
atgttcgagctcaccgcctccctccccctggagaaggacctccgggtgatgctgtacgac
cacgacatgctgaccaaggacgagaagatcggagagacgctgatcgacctggagaaccgc
ttcctgtcccgacacggcgcctcgtgtggcgtgccgcggtcctacagcctgtcgggggtc
aaccgctggcgggaccagctgaccccgaggcagctgctgtccagagtgtgtgagcgccgg
aacctgaagaaaccggtttaccacgaggaggaggtccacttcagaggagagcgctacacg
gccgcagacctgcaggaagataaaaacgtgtccaggcgccacctcggcccgctgaaggag
cgcctgtcgctcctcatcctgaggaagctgggcgtggtccccgagcacgtggagacccgc
cggctgctcagcccgctgcagccggacatcgagcagggccggctgatgatgtgggtggac
ctgttccccaaatccctgggaccccccggagccccgttcaacgtcacgccgcgcaaggcc
aacaagttcttcctgcgttgcgtcatctggaacaccagcgacgtcatcctggacgacgtc
agcgtcagcggcgagaggatgagcgacatctacgtgaagagctggatggacggtcacgag
cacagcaagcagaagaccgacgtgcactaccgctccctgggcggagaggggaacttcaac
ttccgcttcctgttccccttccactacctgccggccgagcagctgtgcgtcttcgacagg
aaggaacatttctggagtctggataaagccgagactaaactggctcctaaactcaccgtc
cagatctgggacaacgacaagttctccttcgacgactacctcggccacctggtgctggac
ctgaaccgcatgctgcgcccggccaaggccccagaggggtgtggcctgcagctgacggag
cagccggcggagcggctggtgtctctgttccagcagaagacggtcagagggtggtggccc
tgcacctgtgagcggggcggggagaaggtcatcgcggggaaggtggagatgtctctggag
atcgtgacggagcaggagcacgaagagaggcccgccgggccggggagggacgagcccaac
atgaacccccacctggaggagccccagcgtccagagacctccttcctgtggttctcctct
ccctttaagaccctgaggttcatcctgtggaggcgcttcaagtggttcatcatcctcttc
atcgtcctcttcttcctgttcctcttcttcagcgtcttcctctactccttcccgaactac
gtggccatgaagatggtgggacctttcgggccagcaaaggcagcagagtga
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