KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130212087
Entry
130212087         CDS       T09868                                 
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2 isoform X1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pswi04990]
    130212087
Domain-containing proteins not elsewhere classified [BR:pswi04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   130212087
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz Beta-prop_NWD2_C WDR55 EIF3I WD40_WDHD1_1st Beta-prop_EML_2 NPHP3_N Beta-prop_WDR90_POC16_2nd AAA_16 Beta-prop_RSE1_2nd AAA_22 Beta-prop_TEP1_2nd NACHT Beta-prop_WDR19_1st AAA PQQ_2 AAA_28 NPHP3 TniB
Other DBs
NCBI-GeneID: 130212087
NCBI-ProteinID: XP_056299197
LinkDB
Position
21:6976968..7012740
AA seq 1731 aa
MWPSGVGSRQPCPRELALRKAAISGNINALPHHVPTGRSVRVFICANPDDTEAERNALKE
HVYPKLRDFCRENYGIEFQVVDLYWGADPEDWDSPDLQRLRMKLLEECLKTSAGPCFVGL
VGEKYGSIRVPGEVESAEFEMILDASVEAGLDTHILEEWYCRDENSVPPAYYLKPKAQML
KNYQNSMESSSAAKTKNDKAWRNVSEEIKKIFRTAVLQLQEKGTMKSAQAKKFLCSALED
ELDFALGKQTPAFLKKCVCYIRKISNFDRFAKIPEMTRYMDTVVGVDRVMRNQESYERLL
KVRDEFIPTIVAASNLRVYSSVTHCDMKLGYSQEVESNYVEGLCKQFYEDMVDIIQATVQ
QNLGTETDPLYAEILQHLSLCKSYADLYQFKTESLDYVQEYLLPSKGSRMSPLVVYGGPC
TGKTLLLSEVAKQAYTWLQKEMGPETDPVVIVRFIGSSQLSTDLRTLLQSICEQIAINYR
CLIHFLPNKIQEMKELLINLLGEASFHRPLVIVLDALEQLSDADEVRKLWWLPIHLPRTV
RIVVSTLPNKHGILQKLRQLIHDEGYYVELIQRDRKLCSQTLKQQLLEVKRKVTSGQQIY
VNEALAKCTLPMFVNLIYREVVHWRSHKDVDGRSLCSTVHESIEQLFYSVENKLGQRFVF
RALGYITMAKAGLTEVELEDILSLDNIVLGDVIVATYLKNPLRISYDLVARLKEELGGYL
VERQVRNVTLMVWANRHLHLIAQKLYLSNEEDVHQMHSLLAEYFLGAWAGGRKKIFTCDN
NHFTSLNISHHKNPHQQPSHEKTSSDKYSYDRQTPEQPWVFQCNLLEPDIFFVNHRKMTE
LVYHLTRSGRTDDLMFSVIMNFSWLYTMIKIGQFEKALTDIDLAYSYTQEKELKFLATTL
RCIKLKVLKNPASLSAELQQRLLPVVTSLPKLRHLLLECDKDGPKYCSIVPLHSSMDVTY
SPERLPLCSSYMQIVEILPTLAPNIVLVALEDGSVSTWDVESRQLQRKIDTAKSVVLGIR
LTTDEKYLVVATTKNTLLIYDNHKSCLLSEVEIKGSKQGGVAGAVAFINGFTLSTHHALA
WLEASKDVNVIDLLYGWPLYQFHCWYEVTCVQCSPDGMYAFCGQYLNTASIFHLGNGDKL
ATVTSEFSGGFVKSILVLDTLNQMVMVDNEGSLSVWNTKEITNPRLMEDYDCRGDDSEVV
GIELSEDQRSILICKARSIEVLDTKVWKMVEKFKAKRTERFVAAVLSKNGQSIVASMENT
SSIFVWRRDSGQCMASLIEISGAIVKLIKSTHHNLLLSVTSSGVLSVWDIDIITAMSNID
KTGKKILTLQLSGREDYVFTLDGSEDVHKWNFSTGFIETVFKHEGIVENCVLTSSGDLMV
TSDDKSSQYIWQTTTGENIFRINGQKISQLLITHNDQFVVSLCEQNASRVWRLGTGHKVC
NILVTLQNALVTTANTFLVGSSKNKLLAVSLWSGSVSKKFVCDDGITIVNFKLIPDCPDC
VVFITSTETVIIWSVADESVCRRVQLPPNFLKNLEDFQISPNGKVGIVSKGDENINVLDL
HSGKLRLVHAAGIIWRQKLSRDGRYLVYVSFRSCEEDDDAGAVSNLIVMRLADGKTIGTC
SLYKTPTYLCLSQRALNIIIGFEDGSIGTYTVVDRVDAALKIKIATSNSRQIVNNASQRV
RPKCGNHSFKTVADCVWRESTEVFSRDSPINVSDSGEGESTTPTKKTESLQ
NT seq 5196 nt   +upstreamnt  +downstreamnt
atgtggccgtcgggagtggggagcaggcagccctgcccgcgggagttggcgctgcgcaag
gcggccatcagcggcaacatcaacgccctgccgcaccacgtccccaccggccgcagcgtc
cgcgtcttcatctgtgccaaccccgacgacacagaggcggagaggaacgcgctgaaagaa
cacgtctaccccaaactacgagacttctgcagggagaactatggaattgaattccaggtg
gtggacctgtactggggcgcggacccagaggactgggacagtccagatctccagcgactc
aggatgaaactcctggaggaatgtctgaagacctccgcgggaccatgttttgttggtctg
gtgggagaaaagtacggcagcatccgagtgccgggggaggtggagtcagcggagttcgag
atgatcttggatgcatcggtggaggcggggctggacacgcacatcttggaagagtggtac
tgcagggatgaaaactctgtgccacccgcatactacctcaaacccaaagcccaaatgctt
aagaactaccagaactctatggagtcgagcagcgcagccaagaccaagaatgacaaggcc
tggaggaacgtgtcggaggagatcaagaagatcttccgaacggcggtgctgcagcttcag
gagaaggggaccatgaagagcgctcaggccaagaaattcctttgctctgccttggaggat
gaattggactttgcacttgggaaacaaactcccgcctttctcaagaaatgcgtctgctac
attcgcaagatctccaactttgaccgcttcgccaaaatccctgagatgacccgctacatg
gacactgtggtcggcgtcgatcgcgtcatgcgcaaccaggaatcctacgagcgccttctg
aaggtgcgcgacgaattcatcccaacaattgtcgctgcctccaacctccgtgtctattcc
tcagtcacccactgcgacatgaagctgggctactcccaggaggtggagagcaactacgtc
gagggtctgtgtaaacagttctacgaggacatggtggatatcatccaggccacggtccag
cagaacttgggcacggagaccgacccgttgtacgccgagatcctgcagcacctgtcgctc
tgcaaaagctacgcggacctctaccagttcaagaccgagtcgttggattacgtccaggag
tatctcctgccctccaaggggagccgaatgagccctctggtggtgtacggggggccgtgc
accgggaagacgctgctgctctccgaggtggccaaacaggcgtacacgtggctgcagaaa
gagatgggccctgaaaccgacccggtggttattgtccgtttcattggctccagccagctc
tccacagatctacgcactctcctccagagcatttgtgaacagattgcaataaactaccgc
tgcctgattcactttttgcctaacaagatccaggagatgaaggagctcctgatcaacctt
ctaggagaagcttcattccaccggcctctggtcattgtcctggatgccctggagcagctc
tcagatgcggacgaagttcgcaagctgtggtggctccccatacacctgcctcggacagtc
cgcattgtagtctcaacattacccaataaacatggcatcctgcagaagcttcgacagctc
atacatgatgaggggtattatgtggaattaatccagagggaccgcaagctctgcagccaa
acattaaaacagcagttgctggaggtgaagagaaaggtcacctcaggccaacagatctat
gtcaatgaggcgcttgccaagtgtacattgccaatgtttgtcaacctcatctacagagaa
gtagttcattggagatctcacaaagatgtggacggcaggtccctgtgctccacagtgcac
gaaagcatagaacagctcttctactcagtggagaacaagttgggccagcgatttgtcttc
cgagcattagggtacatcaccatggccaaagctgggctaactgaggtcgagctggaagat
attctgtcccttgataatatagttcttggggacgtaattgtggcaacctacctcaagaac
cccttgaggatctcttatgatttggttgcaaggctcaaagaggagctgggtggctacctg
gtggaacgtcaggtacgtaacgtcaccttgatggtttgggccaacagacacctgcatctc
attgcccagaagttgtatcttagcaacgaggaggacgtccatcaaatgcacagcctccta
gctgagtacttcctcggggcatgggcaggaggcaggaagaagatcttcacttgtgataac
aaccatttcacttccctgaatatatctcatcacaaaaacccccaccagcagccgtcccat
gaaaaaacatcctctgacaagtactcctatgacagacagacaccagagcagccttgggtg
tttcagtgcaatcttttggagcctgacattttctttgtcaaccatcggaagatgacagag
ctggtgtaccatcttaccaggagtgggcgcactgacgacctcatgtttagtgttatcatg
aacttcagctggctgtacacaatgatcaagattggccaatttgaaaaggcgttaaccgac
attgacctagcgtacagctacacccaagagaaagaactcaagttcctggccaccactctc
cgttgcatcaagttaaaagtgctgaagaacccagcatcactgtctgcagaactgcagcaa
aggcttttgccagttgtcacctcgctccccaagctcagacacctcctcctggagtgtgac
aaagatggcccgaagtactgctccattgtgcctctccactcctctatggatgtcacctac
agtccagagaggcttcctctgtgctctagctacatgcagattgtggagatcttgcccact
ctagccccaaacatagttcttgtcgccctcgaagatgggtctgtgagcacatgggacgtc
gagagtagacaacttcaaagaaagatcgacacagccaaatccgttgtgcttggaatcagg
ctaaccactgatgaaaagtatctggtcgtggccacaaccaaaaacacgttgctcatctat
gataatcacaagtcctgccttttatctgaggttgaaatcaaggggtccaagcaaggtggt
gtcgccggtgcggtggccttcatcaacggttttactttgtccacccaccatgctttggct
tggcttgaggcgagtaaagacgtcaacgttattgacctactctacggttggcctctctac
cagttccattgctggtatgaggtgacttgtgtccagtgctctccagatggaatgtacgcc
ttctgtggccagtacctcaacactgcatccatctttcatctgggaaacggggacaagttg
gccactgtgacctctgagttttctgggggatttgtaaagtccattctagtgctggacacc
cttaaccaaatggtgatggttgacaatgaaggcagtttgtcagtatggaacaccaaagag
atcaccaacccacgtctgatggaggattacgattgtcgaggggatgacagtgaagtggtg
ggaattgagttgtctgaagaccagcgctccattctcatttgcaaggccagaagtattgag
gttctggacacgaaagtatggaaaatggtggagaagttcaaagccaaacgcacggaacgc
tttgtggcggctgttctctccaagaatggacaaagcattgtggcctccatggagaacacc
tcctccatctttgtttggaggagggacagtggacaatgcatggctagcctcattgaaatc
tccggggctatcgtcaaactcatcaaatcaacccaccacaacctgctcctttctgttacc
agcagtggcgtactgtcggtttgggacattgatatcatcaccgctatgtctaatattgac
aaaacaggcaagaagatcctgaccttacagctgtccggcagagaggattatgtgtttact
ctggacggttcagaagatgtccacaaatggaacttcagcactggctttattgagacggtc
tttaagcacgagggcatagtggagaactgtgtcctaacctcctcaggggatctcatggtg
acatcagatgacaagtccagtcagtacatctggcaaaccaccactggagaaaacatcttt
cgcatcaatggacagaaaatatcacagctgctaatcacccacaacgaccaatttgtggtg
tccctctgcgagcagaacgcctccagagtctggaggcttggtactgggcacaaagtttgc
aacattttggtcaccctccagaatgcactggtcaccacagcgaacactttccttgtggga
agctccaaaaacaagctcctcgctgtcagcctgtggtcaggcagcgtatccaagaagttt
gtctgcgacgatggcattactattgtcaacttcaagctcatccctgactgcccggactgt
gtggtgttcatcacatccacagagaccgtcatcatctggagtgtggcggatgagtcagtt
tgcaggcgagtccagctgccacccaatttcctcaaaaatctggaggacttccagatctcg
cccaatgggaaagtaggaattgtctccaaaggtgatgagaatattaatgtcctggatctt
cacagcggcaagctgaggcttgtccacgctgctggtataatttggcgtcagaaattatca
agagatggacgttatctcgtgtatgtctctttccggagctgtgaagaagacgacgatgcc
ggcgccgtgtccaatctgatcgtgatgcgcctcgccgatggtaaaaccatcggcacatgc
tccctgtacaagacgcccacttacctgtgtctctctcagcgagcactaaacatcatcatc
ggcttcgaggacggcagcatcggcacatacacagtcgtggaccgcgtggatgccgccctc
aagataaagatagccacgtccaacagccgacagattgtcaacaatgcctcgcaaagggtg
cggcccaaatgtgggaaccattcctttaagaccgttgccgactgcgtttggagggagtca
acggaggtcttctccagggacagccctatcaacgtgtcggactccggcgagggtgagtcg
accacgcctacgaaaaagactgaatcgctgcagtga

DBGET integrated database retrieval system