Pseudoliparis swirei (Mariana hadal snailfish): 130212134
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Entry
130212134 CDS
T09868
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130212134 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130212134 (poln)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130212134 (poln)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
130212134 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
130212134
NCBI-ProteinID:
XP_056299250
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Position
21:complement(5318715..5357708)
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AA seq
739 aa
AA seq
DB search
MSGMHEDSCAPEQTRQIRQRARNASKQTASAVTGKPRKHKQAKCGPGQEINGPELFREAA
DGNELQNQSKAGCLTATLTSDPRVRDSWKMNPDEKMQMLERAGKTKALVLTLVYRDGTTQ
LDPEQKLTPEVCGLLVLMKNKLDRSAPEDSLEPNDCLVYLKLEHTPAWAQQHTHQSQELF
TKDMLLLVLSSSQPAVCYKAKDLLCTALQFYRPELSWKQVAGCRIHDPQVSGWLLDPANP
SSCYPELLSRHSKRPRTIPAMGTKKVSQVISGLYSLYWLNMELCFKLQSQGLWRLYSDME
LNMISVLAAMESHRIHVDKEALKRTSELLGTKMKQLEQDAHRAAGQIFLVTSSTQLRTVL
FEKLCLHERCENKKLPKTVNKQQQSTSEAALLQLQDLHPLPKIILEYRQVHKIKSTFVDG
ILSCMASKNSVSSTWNQTSAVTGRISAKHPNFQALPRQPLQITKKQYVQGKEEEVVTVHP
RAMFIPHDGWTFLSADFCQVELRLLAHLSSDPELLRIFINPQVDVFTMLASQWKGVSEGE
VTSEDREHAKRIVYSVVYGAGRERLSGILGVSAEQASRFQDSFLQTYKEVQTFIQRTIQQ
CHKQGYVLSIMGRRRSLPNINSPDWGLRMQAERQAVNFVVQGSAADLCKMAMIKIFNLVS
SSSSLSARLVAQLHDELLYEVEDSQVEQFAGLVRSTMESLQHIDHLGVHLKVPLRVAVSS
GKSWGSMSDLNPPTVSPSH
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggatgcacgaagactcgtgtgccccggagcaaactcgacaaatccggcagaga
gctaggaacgcttccaaacagaccgcatcggccgtcactggcaaaccacgtaagcacaag
caggccaaatgtgggcccggccaggagataaatgggccagagctatttcgtgaagcggcg
gacggcaatgagctccagaaccaatctaaagccggctgtctgactgctaccctgacctct
gaccccagagtgagggattcgtggaagatgaacccagacgagaaaatgcaaatgctcgag
agggcggggaagaccaaggcgctggtgctcaccttggtgtaccgagatggaaccactcag
ttggacccagaacagaagctcactccagaagtgtgtggcctcctcgtactgatgaagaac
aagctggaccgcagcgcaccagaggactcgctggagccaaacgactgtctggtctacttg
aaactggaacacacacctgcgtgggcccagcaacacacacaccaaagccaggagctcttt
accaaagatatgctgctgctggtgctatcgagctctcaaccggcggtgtgctacaaagcc
aaggatttactttgtacagctctgcaattttaccgaccagagctcagctggaaacaagtg
gcaggctgtcgtatccatgacccgcaggtgtcggggtggctactggatcctgcaaatccc
tcctcctgctacccggagcttctcagcagacacagcaaaaggccccgtacgataccggcc
atgggaaccaagaaggtgtctcaggtcatctcaggtctctattcgctgtactggctcaac
atggagctatgctttaaactacagagccaagggctgtggcggctgtactcggacatggag
ctgaacatgatctctgttctggcagccatggagagccatcgcatccacgtggacaaagaa
gctcttaagagaacgtcagagctgctggggaccaagatgaagcagttggagcaggacgcc
caccgagcagcaggacagatcttcttggtcaccagcagcactcaactacgaacagtcctg
tttgagaagctgtgcctccatgagcgctgcgagaacaagaaacttcccaagaccgtcaat
aaacaacagcagtcaacatcagaagctgcattgttgcagcttcaggacctgcacccgctg
ccaaagatcatcctcgagtacagacaggtccacaaaatcaagtccacttttgtcgatggg
attctctcatgcatggcgagcaagaactctgtttcctcgacatggaaccagacaagtgct
gtgacggggagaatctcagccaagcacccaaacttccaggcgttgccgagacagccgctt
caaatcaccaagaagcagtacgtccaaggaaaggaggaggaggtggtgactgttcatcct
cgggcgatgttcatccctcatgatggatggacttttctctctgcagacttctgccaggtg
gagctccgtctgcttgctcacctttcctctgaccctgagctgctccgcattttcatcaac
ccacaggtggacgtctttaccatgttggcctctcagtggaagggggtgagtgaaggcgag
gtgacttcagaggatcgggaacacgccaaacgcatcgtctactctgtggtgtacggggca
ggtcgtgagcgtctgtccgggatcctcggggtgagtgctgagcaggccagccgattccag
gacagcttcctgcagacctacaaagaggtccagactttcatccagaggaccatccagcag
tgccacaagcaaggttatgttctctccatcatggggcgtcgacgcagcctcccgaacatc
aactcacccgactggggcctccgcatgcaggcggagaggcaggcagtcaactttgtggtc
caaggttctgctgctgacctctgtaagatggcaatgatcaaaatcttcaacctggtctcc
tcctccagctcgctctccgccaggctggtggcacaactccacgatgagctgctgtacgag
gtggaggactcccaggtggagcagtttgcaggtctggtgaggagcaccatggagtccctt
cagcacatcgaccatctcggagtccatctgaaggtccccctgagggtggcggtctccagt
ggaaagtcttggggatccatgtcggaccttaatcccccgacagtgtctccctctcattga
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