Pseudoliparis swirei (Mariana hadal snailfish): 130212150
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Entry
130212150 CDS
T09868
Symbol
arhgef15b
Name
(RefSeq) ephexin-1
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130212150 (arhgef15b)
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130212150 (arhgef15b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
PH
SH3_2
SOS1_NGEF_PH
SH3_9
RHG20_PH
DUF1015
Cauli_DNA-bind
Motif
Other DBs
NCBI-GeneID:
130212150
NCBI-ProteinID:
XP_056299265
LinkDB
All DBs
Position
21:11949806..11962893
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AA seq
1031 aa
AA seq
DB search
MSVQEASQTASSPPPLKPEAKPRPEIAPKPSPQTSGPPAAGDRGGGGGGGGGASISAGKV
KSIVSKFSRKESGEVNEGPANGTAEVPSIKRFKRPPTVKPKPDCASLQLQLGGERAPPLP
AKKSRVALRRKGSGGEEEEGDGVGVEGGRSAPDGKEVEIRLIGGGEAEAELGPHTPLSPS
CEPGCSCVCHLQWPGMKLVWVPVDTEDAWEGEEGEDEEEEEEEADVEEHRTEEEEDWEED
AEVATRGDEVDRMSVIDERDVLKQDKVKFHHCLDVLIADGHRRLSDPGPRSVLAFLAATR
SQSPRVPPKRAQSPHVASHVSEEENVYEATLPVGNQAQRKSKELDIPVILVRKPPRQSRL
TYSASDPTSEFQTDGESIPSPDDVPPAVPPRMPVIHAPVHRGVALPQATAEEWRNLRPSS
PGGLSPQMAGAPTPPSPHRPPPPPPKTDPRRLSSASMQSLTQKKEGEENGASEGEKEDSA
EEPRPVRSDSLRRVSSFSWESRLQDEPMYQTYRATVITKEIRRQTVCRNISKTSVDYAMD
WAARRPGTGTGTGTGNGTPRSSPVPAGCQSTLWQDLSTVREGGVLEQLTPEQCKYQESMF
EVLTSEASYLRSLRVLTEHFLNSRELEDTMIIRDRKTLFSNIHKIQEVSERFLKDLEDRI
FKHLVFQDICDIIHYHAQHNFPAYIDYVRNQIYQDKTYTSLLKNNAQFATVITRLQESPQ
CQRLPFMSFLLLPFQRITRIKMLLESILKRTKEKTKEEQAASKALTSVSKIIEECNTQVG
KMRQMEELYHISQTLEFYKLKAVPIISQTRYLEKKGELQEMSKGGTIFNKRSKFNPIYLF
LFNDLLIIAAKKGTERFVVVDHAHRSLVQVQSTEEGGGGGGALEHCFNLTLLENHQGRMM
ERLLKAPSQSDMHRWMAAFPNPTNPDRDEEEVIYEDWDCPQVQCVEQYIAQQTDELALEP
TEIVNIVRKTNEGCFQGIRLSDGQKGWFPAANVIEITNEHVRRRNLRERYRVMQAAMPQH
PAVGRRTFTVQ
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccaggaggcgtcccagacggcctcgtcgcctccgcccctcaaacccgaggcc
aagcccagaccggagatcgcccccaagccgtcaccacaaaccagcggccctcccgccgcg
ggagaccgaggcggtggcggcggcggcggcggcggcgcgagcatttctgccgggaaggtc
aagagcatcgtgagcaagttcagcagaaaggagtcgggcgaagtgaacgaaggacccgcg
aacggaaccgcggaggtgccgtcgattaaacggttcaagaggccgccgacggtcaagccc
aaaccggactgcgccagcctgcagcttcagctcgggggggagagggcgccgccgctgccc
gccaagaagagccgcgtcgccctgaggcggaaagggagtgggggggaggaggaggagggg
gacggcgtgggcgtggaaggaggtcgatcagcgccagacggaaaagaagtggagatccgg
ctgattggaggaggcgaagcggaggcggagctcgggccgcacacgcccctcagcccgagc
tgcgagcccggctgcagctgcgtgtgtcacctgcagtggcccggcatgaagctggtgtgg
gtgcccgtggacacggaggatgcgtgggagggagaggagggagaggacgaggaggaggag
gaggaggaggctgacgtggaagagcacaggacggaggaagaggaggactgggaggaggac
gcggaggtggcgacgcggggggacgaggtggaccggatgtctgtgattgatgagcgtgac
gtgctgaaacaagacaaggtgaagttccaccattgtctggatgttctgatcgccgacggc
caccggaggctttcggacccggggcctcgctccgtcctcgccttcctcgccgccactcgc
tctcagtctccccgggtgcccccgaaacgggcccagtcgccacacgtcgcctcacacgtc
agcgaggaggagaacgtctacgaggccacgctcccggtgggcaaccaggcgcagaggaag
tcaaaggagctggacatccctgtgatcttggtacgcaagcccccccgccagtctaggctg
acctacagcgcctcggacccgacgtccgagttccagacggacggcgagtccatcccgagc
ccggacgacgtgccgcccgccgtcccgccgaggatgcccgtgattcacgcgccggtccac
cggggcgtcgccctgccccaggccacggcggaggagtggcgcaacttgcggccctcgtcc
cccggcggactgagcccccagatggccggcgctcccacgccacccagcccccacaggccg
ccgcccccaccgcccaagacggaccccaggaggctcagcagcgcctcgatgcaatcgctc
acgcagaagaaagaaggagaggagaacggagcgagtgaaggagagaaggaggactcagcc
gaagaaccgcgtccagtcaggagcgactccctccggcgggtgtcttcgttcagctgggag
tcccggctgcaggacgagccgatgtatcagacgtaccgcgccaccgtcatcaccaaggag
atccggcgccagacagtgtgtcgcaacatcagcaaaacgagcgtggactacgccatggac
tgggctgctcgtcgccccgggaccgggaccggtaccgggaccgggaatggaacgccgagg
agcagccccgtgcccgcggggtgccagagcaccctgtggcaggacctctccactgtgagg
gagggaggggtgctggagcagctcaccccggagcagtgcaagtaccaggagagtatgttc
gaggttttgacatccgaggcctcgtatcttcgctcactgcgagttctgaccgaacacttc
ctgaacagccgggagctggaggacacgatgatcatcagagacaggaagaccctgttctcc
aacatccacaagatccaagaggtcagcgagaggttcttgaaggacctggaggatcgcata
ttcaagcacctggtcttccaggacatctgtgacatcatccactaccacgcccagcacaac
ttcccggcctacattgactacgtccgcaaccagatctaccaggacaagacctacacctca
ctcttgaagaacaacgcgcagttcgccacggtcatcactcgtctccaagagtcgcctcag
tgccagcggctgcccttcatgtccttcttgctgctgcccttccagagaataacacgcatc
aagatgctgctggagagcatcctgaagagaacaaaggagaagacgaaagaggagcaggcg
gcctccaaggctttgacttcggtgtccaagatcatcgaggagtgtaacacacaggtgggg
aagatgcgacagatggaggagttataccacatctctcaaacactggagttttacaagctc
aaggccgtcccgatcatctcccagacgcgatacctggagaagaaaggggagctgcaggaa
atgtccaaaggagggactatcttcaacaagaggtcaaagttcaaccccatctacctcttc
ctcttcaatgatctgctcatcatcgcggccaagaaaggcaccgagcgcttcgtggtagtc
gaccacgcccaccgctctctggtgcaggtgcagtcgacggaggagggcggggggggcggc
ggcgccttggagcactgcttcaacctcacactgctggaaaaccaccagggccgcatgatg
gagcggctgctcaaagctccctcccagtcagacatgcacaggtggatggcggctttcccc
aacccgacgaacccagacagagatgaggaagaagtgatttatgaggactgggattgtcct
caggtgcagtgcgtggagcagtacattgcccagcagacagacgagctcgccctggagccc
actgagatcgtcaacatcgtccgcaaaaccaatgagggctgcttccaaggcatccgcctg
tccgacggccagaagggctggttccccgcagccaacgtcatcgagatcaccaacgagcac
gtgaggcggaggaacctccgcgagcgctaccgagtcatgcaggcggccatgccccagcat
cctgcagtaggacgaaggacgtttacagttcaatag
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