Pseudoliparis swirei (Mariana hadal snailfish): 130212194
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Entry
130212194 CDS
T09868
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130212194 (gabra1)
04082 Neuroactive ligand signaling
130212194 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130212194 (gabra1)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
GABA-A
130212194 (gabra1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130212194
NCBI-ProteinID:
XP_056299319
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All DBs
Position
3:380933..433301
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AA seq
490 aa
AA seq
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MQSVFHPLFLFLFLVAFLHPVKGPQISTMCGRSRAALLLLWAGSFATSGVLGGKSSGQNG
MTDEQEDNTTVFTKILDSLLDGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHEMEYTID
VFFRQSWKDERLKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITE
EGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTQAEVVYVWTRGAAQSVVVAE
DGSRLNQYDLMGQSVDSGVVQSSTGEYIVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQV
SFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIE
FATVNYFTKRGYAWDGKSVVPEKPKKKKKESLPKKNNTTAYPAATATAFAPNIARDPGLA
TIAKSALAPPSDPKEEPKPKPPEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNK
KPKLQGMDPL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggtgtttcatcctctctttctctttctttttttggttgcgtttcttcatcct
gtgaaaggtcctcagatctcaaccatgtgtggacggagcagggcggcccttctgctcctg
tgggcgggctcgttcgccaccagcggcgtcctgggcgggaaaagctccgggcagaacggc
atgacggacgagcaggaagacaacaccaccgtgttcaccaagatcctcgacagtctcctg
gacggctacgacaaccgcctccggccgggcctcggagagcgcgtcaccgaagtgaagacg
gacatcttcgtgacgagcatcggacccgtctccgaccacgagatggagtacaccatcgac
gtgttcttcaggcagagctggaaggacgagaggttaaagttcaaggggccgatggccgtg
ctgcggctcaacaacctgatggcgagtaagatctggacgccggacacgttcttccacaac
gggaagaagtctgtggcgcacaacatgacgatgcccaacaagctgctgcgcatcacggag
gagggcacgctgctgtacaccatgaggctgacggtgagagcagaatgccccatgcacctg
gaggacttcccgatggatgcccacgcgtgtccgctgaagtttggcagctatgcctacact
caggccgaggtggtgtacgtgtggaccaggggggcggcccagtccgtggtggtggccgag
gacgggtcccggctgaaccagtacgacctgatggggcagagcgtggactccggggtggtg
cagtccagcacaggagagtacatcgtcatgacgacccacttccacctgaagaggaagatc
gggtactttgtgatccagacgtacctgccgtgcatcatgaccgtcatcctctcccaggtg
tccttctggctcaacagggagtccgttcccgccaggacggtgttcggagtgaccacggtc
ctgaccatgaccaccctgagtatcagtgccaggaactctctccccaaagtggcctacgcc
acggccatggactggttcatcgccgtgtgctacgccttcgtcttctccgccctcatcgag
ttcgccacggtcaactacttcaccaagaggggctacgcctgggacgggaagagcgtggtg
ccagagaagccaaagaagaagaagaaggagtcgctcccgaagaagaacaacaccaccgcc
tacccggctgccacggccacggccttcgcccccaacattgccagggaccctggattggcc
acgattgccaaaagcgccttggcgcccccgagcgatcccaaggaggagcccaagcccaaa
ccccccgaggccaagaagaccttcaacagcgtgagcaagatcgaccggatcgccagaata
gccttcccgttgctctttggaacctttaatctggtctactgggcaacctacttgaataag
aagcccaaactccaggggatggatccactctaa
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