Pseudoliparis swirei (Mariana hadal snailfish): 130212197
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Entry
130212197 CDS
T09868
Symbol
nfxl1
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1 isoform X1
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130212197 (nfxl1)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
130212197 (nfxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
FAXC_N
Motif
Other DBs
NCBI-GeneID:
130212197
NCBI-ProteinID:
XP_056299323
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All DBs
Position
21:1804754..1823694
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AA seq
910 aa
AA seq
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MTTRSQTTPWRFFSLPRVSEAVAMEPAWRQQGRGRGRGQEGPGERSRPPQKEREAPGRSK
FEEIRKSNQAAAQRLVESRVSASSSDEEEDDEEAKVDHKDGKRGKILESTFTTYTNQTGG
DATGLVRTGQYVSDLFQSGALTCLICIGSVKRTQAVWSCSSCFSLFHLPCIQKWARDSVF
LVSSVTDEDFGQKQHPWPCPKCRAEYPPSATPNRYMCYCGDQQDPPADPWLSPHSCGSVC
QKQLKPSCGHTCLLLCHPGPCPPCPKMVSVSCMCGNAKPLPRRCSNKAWSCQQTCSKLLP
CKQHKCTQPCHTECRPCPRASIQRCVCGRQQSERSCASPQWNCDQVCCSLLSCGNHTCEV
PCHGGVCPPCPRSVSRTCPCSKTKSSLPCTEEVLPCGDTCDRRLSCGKHTCSMRCHRGSC
ETCRQEVAKECRCGKYRKFMPCHKEYLCDSKCPKTRSCQRHQCRRKCCPGNCPPCDQSCG
RTLGCRNHKCPSGCHPGSCYPCPEAVEVTCSCGSTQLSVPCGRERSTRPPRCKETCRCPP
SCHHPCREAHRCHPGPCPPCRLPCLLPLPRCSHSCPPPCHDQVLVRSQQVQLAGPWEQPS
EPAFVQKALPCPPCQVPIPTSCFGEHEVSVVPCHRRGRFSCRRPCGRPLTCGNHDCSREC
HLVTDGNKVTTSLDGPRETSALITSLSPQCKVCEEGCSKPRPPGCPHPCPRPCHPGNCSA
CSQMIRQRCHCKISLLYVECTKLTSADQRTKEELSCSNQCPKELSCGHRCKQVCHPGVCE
EKCQQKVKLRCPCRRIKKEFLCSLSNQCVVQCVDACRDQQRKVSQVKEAELRAAQEEEQK
KLQEELEAFEKRQQRGGRRSKKRGRREEEEEEVEEEARRAGRWWRRCTALLLIPLGGALL
AAAYYLLPEA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgacaactaggagccagactactccgtggcgcttcttctctctgccgagagtatcagag
gctgttgccatggagccggcctggcgccaacaaggcagggggcgtggccggggtcaggag
ggtccaggtgaaaggtcgcgccccccccagaaggagagggaggcgccggggcgttccaag
ttcgaggagatccggaagtccaaccaggctgctgctcagcgattggtggagagccgtgtt
agcgcctcctcctctgatgaggaggaggatgatgaagaggccaaggtcgaccacaaagac
gggaagaggggaaagatcctggagtccaccttcaccacctacaccaaccagacaggtggt
gatgctaccggtctggtgagaaccggtcagtacgtcagtgacctgtttcagtccggagcg
ttgacctgtctgatctgtatcggctctgtgaagaggactcaggcggtgtggagctgctcc
agctgtttctccctgtttcacctgccgtgtatccagaagtgggcccgagactccgtcttc
ctcgtgtcctccgtcactgatgaagacttcggtcagaagcagcatccctggccctgtccc
aagtgtcgagcagagtacccgcccagcgccacgcccaacaggtacatgtgttactgtggg
gatcagcaggaccctccagctgacccctggttgtctcctcactcctgtggctccgtctgt
cagaagcagctcaaaccctcgtgtggacacacctgtctgctgctgtgtcaccctgggccg
tgtcctccgtgtccaaagatggtgtctgtgtcctgcatgtgtggcaacgctaagcccctc
ccccgtcgctgtagcaacaaggcctggtcgtgtcagcagacgtgcagcaagttgttaccc
tgcaaacagcacaagtgtacacaaccctgtcacacagagtgtcgtccctgcccccgggcc
agtatccagaggtgtgtgtgtgggagacaacagtcagagaggagctgtgcgagtcctcag
tggaactgtgaccaggtgtgttgctctctcctctcctgtggtaatcacacctgtgaggtt
ccgtgtcacggtggtgtttgtcctccgtgtcctcgctccgtcagcaggacatgtccctgc
agcaagaccaagtcctctctgccgtgcacggaggaggtgttgccttgcggcgacacgtgc
gaccgccgtctgtcgtgtggaaaacacacctgttcaatgaggtgtcaccgaggaagctgt
gagacctgcagacaggaggtggcgaaggagtgccggtgtggtaaatacaggaagttcatg
ccgtgccataaagaatacctgtgtgactccaagtgtccaaaaaccagaagctgccagaga
caccagtgcaggaggaagtgctgccctgggaactgccccccatgtgaccagagctgtggg
cgaacgctggggtgtcgcaaccacaagtgtccctctggctgccacccaggtagctgctac
ccctgccccgaggccgtggaggtcacgtgttcctgtggctccacccagctgtctgtcccc
tgtggacgggaacgcagcaccagaccaccccgctgcaaagagacctgcaggtgtcccccg
tcctgccaccacccatgcagggaggcccaccgatgccaccccgggccctgccccccctgc
cggctgccctgcctgctgccgctgccgcgctgcagccacagctgcccaccgccatgccac
gaccaggtgctggtcaggtcccagcaggtgcagttagcagggccctgggagcagccctct
gaaccagcgtttgtgcagaaagctctgccttgtccaccgtgtcaggtacccataccaaca
tcctgttttggagaacacgaggtcagcgtggtgccgtgtcatcgccgaggccggttctcc
tgtcggcgaccttgcggacgacctttgacctgcggaaaccacgactgcagccgggagtgt
cacctggttaccgacggcaacaaggtgacgacctcgctcgacggtccgcgtgagacgtcg
gctctgatcacctctctctctccgcagtgcaaggtgtgtgaggagggctgctctaagccc
cgcccccccggctgcccccacccctgcccccgcccctgtcaccctggcaactgctccgcc
tgcagccagatgatccgccagcgctgccactgcaagatcagcctgctctacgtggagtgc
acgaagctaacgtcagctgatcaacgcaccaaggaggagctgagctgcagcaaccagtgc
cccaaagagctgagctgtggccatcgctgtaagcaggtgtgtcatccaggtgtgtgtgaa
gagaaatgtcagcagaaggtgaagctcaggtgtccctgcaggagaatcaagaaggagttc
ctgtgctctttgtcaaaccagtgtgtcgttcaatgtgtcgacgcctgcagagaccagcag
aggaaagtcagccaggtgaaggaggcggagctgagagcagctcaggaggaggagcagaag
aaacttcaggaggagctggaggcgttcgagaagcgccagcagcgaggagggaggaggagc
aagaagagagggaggagggaggaggaggaggaggaggtggaggaggaggccaggagggcg
ggccggtggtggaggaggtgcaccgccttgctcctcatcccgctgggcggagctctgctg
gccgccgcctactacctcctcccggaggcctga
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