Pseudoliparis swirei (Mariana hadal snailfish): 130212214
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Entry
130212214 CDS
T09868
Name
(RefSeq) coronin-2B-like isoform X1
KO
K13887
coronin-2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130212214
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130212214
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
TibC_1st
Motif
Other DBs
NCBI-GeneID:
130212214
NCBI-ProteinID:
XP_056299364
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Position
21:1214650..1264383
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AA seq
593 aa
AA seq
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MSRRSPFGGSKFRHVFGKPSSRERGYGGVPIARSVHDTHGCSANPRFLAVVTECAGGGSF
LVLPIRHTGRVDPQHPRVCGHSGRVLDVKWNPFDDHCVASCSEDCTVKIWDIPVCGVQQN
LTKARTTLIGHSRRVALIEWHPTAENLLLSSAYDYKVLLWDVSQGGAVLRYPVRVVLMPV
HHRCPSDALLLSVSFNSDGSRLAVTSKDRRVRVLDPRTGRILQASSSKSHRASKVLFIGG
LKMLLSTGSSPWNHRQIVLWDPDDLSEPLFEEELDGCAGVLFPFYDPDTHMLYLAGKGDG
NIRYYELSREKPYISFLSEVRSLLPQKGLGVMPKRGLDVSSCEVFRFYRLIAIKDLVEPL
SMIVPRKESDAFQEDLFPMTAGNQAAMTAQEWLLGINRSPVLMSLRPGTRVINPYPETPA
EKGLVRQLSGLRFQMDPAAVAVTGPALDFMEEDTSTGTGGDEDRTADPPKDDQLDKTPRD
FNFQPGGAHTNILQQTTTAFLEEQLAYQDAKYPRDMSDLCGWQPDETHCCTPHCSPAGVL
QTARQNQRPERTTQCQRCEDHAAGAGYPKHQKQHEGNLLIPPIGSHNAVLKLD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcgttctccgttcggcggctcaaagttccgccacgtgttcgggaagccgtcc
tccagggagcgcggctacggcggcgtgccgatcgcccgcagcgtccacgacacccacggc
tgctcggccaatccccgcttcctcgccgtggtgacggagtgcgccgggggcgggtccttt
ctggtcctgcccatacgtcatacggggcgggtggaccctcagcacccgagggtgtgcggc
cacagtgggcgggtcctggacgtcaagtggaacccgtttgacgaccactgcgtcgcctcg
tgctcagaggactgcaccgtgaagatctgggacatcccggtctgtggagtccagcagaac
ctcaccaaggccaggaccactctgattggtcactccaggagggtggcacttattgagtgg
catccgacagctgagaacctgctgctaagctccgcctacgactacaaggtcctcctgtgg
gatgtgtctcagggcggtgccgtgctcaggtacccggtccgggtggttctgatgcccgtc
caccaccgctgcccgtctgatgcgctgctgctgtccgtcagcttcaacagcgacggcagc
cggctggcggtcacgtccaaagacagacgggttcgagtcctggacccccggacaggaagg
atcctgcaggcgtccagcagcaagagccacagagccagcaaagtgttattcattggaggg
ttgaagatgcttctgtccaccggcagctcgccatggaaccacagacagatcgtcctctgg
gaccccgacgacttatctgagcccctgtttgaagaggagttggacggatgtgcaggagtc
ctcttcccgttctacgaccccgacacacacatgctctacttggcaggaaagggtgacggg
aacatccggtactacgagctgagcagagagaaaccgtacatcagcttcctgtcggaggtc
aggtctctgctgccacagaaaggactcggggtgatgccaaagcgcggcctggacgtgagc
agctgtgaggttttcaggttttaccgcctgatcgccatcaaagacctggtggaaccgttg
tcaatgatcgtaccacgcaaagagtcagatgctttccaagaggatctgttcccaatgaca
gctggaaaccaggcggccatgacggctcaggagtggctgttggggatcaacagaagccca
gtcctgatgtccttgaggcctgggactcgagtcatcaacccgtacccagaaacccctgcg
gagaaagggctggtgaggcagctgagtggcttgaggttccagatggatccggctgctgtt
gcagtgaccgggcccgcactggactttatggaagaggacacatcgacagggaccggagga
gacgaggatcgaactgcagatcctccgaaagacgaccagctcgacaagaccccgagagac
ttcaacttccaacccgggggggcacacacaaacattttacagcagacaaccacggccttc
cttgaggagcagttggcctaccaggatgccaaatacccccgagacatgagcgacctgtgt
gggtggcagcccgatgagacgcactgctgcacgccacactgctctcctgcaggcgtatta
cagacagcaagacaaaatcagaggcctgagagaacaactcaatgccaaagatgtgaggat
cacgcagctggagctggatatccaaaacaccagaaacaacatgagggcaaccttctgatt
ccaccaatcggctctcacaatgccgttttaaagctggactaa
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