Pseudoliparis swirei (Mariana hadal snailfish): 130212224
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Entry
130212224 CDS
T09868
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
pswi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130212224 (gabra6b)
04082 Neuroactive ligand signaling
130212224 (gabra6b)
04519 Cadherin signaling
130212224 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130212224 (gabra6b)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
GABA-A
130212224 (gabra6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
130212224
NCBI-ProteinID:
XP_056299388
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All DBs
Position
3:300718..331784
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AA seq
473 aa
AA seq
DB search
MLILKVDQGFLVVGCLRGMAFLLTCFFLSCYSVSSAWGNKPADTNIYLDNITRILDRLLD
GYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEIL
RLNNLMVSKIWTPDTFFRNGKRSIAHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLM
NFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLK
SNTGEYVIMTVHFHLKRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVL
TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRRAAA
MKAAAQEAAAAAAAAGNDGEVSSVEASSVTLKKRMNSGLAFDRPAKTFPNPPVNAQAFLQ
QGSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDTV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctgattctaaaagttgaccagggatttctcgtcgtggggtgcttgcgaggcatggct
ttccttctaacctgcttctttttgtcttgttacagtgtgagcagtgcttgggggaacaag
cccgcggataccaacatctatctggataacatcacgcgcatattggatagattactggac
ggctatgacaaccggctgcgacctggatttggagggccggtgacggaggtcaagacggac
atctttgtcaccagctttggacccgtctcagatgtagagatggaatacaccatggacgtc
ttcttccgtcagacgtggatcgacgagcggctgaagttcgagggccccatcgagatcctg
cggctcaacaacctgatggtcagcaagatctggacgccggacaccttcttccggaacggc
aagcggtcgatcgctcacaacatgaccacccccaacaagctgttccgcatcatgcagaac
ggaaccatcctctacaccatgaggctgaccatcaacgcagagtgccccatgcggctcatg
aacttccccatggacggacacgcctgccctctcaagtttgggagttacgcttaccccatc
agcgagatcgtgtacacgtggaagaaaggcccgctgtcctcggtggaggttcctcaggag
tcctccagcctgctgcagtacgacctcatcgggcagacggtgtccagcgagaggctcaag
tccaacacaggtgaatacgtcatcatgacggtccacttccacctgaagaggaagatgggc
ttcttcctcatccagacctacatcccgtgcatcatgaccgtcatcctggcccaagtctcc
ttctggatcaacaaagaatcggttccggcgaggacggtgttcggtatcaccacggtgctc
accatgacgacgctcagcatcagcgcccgccactcgctccccaaggtgtcctacgccacg
gccatggactggttcatcgccgtgtgcttcgccttcgtcttctccgccctcatcgagttc
gcggccgtcaactacttctccacgctgcaggccaaccgcgagctgaggagggcggcggcc
atgaaggcggcggcccaggaggcggcggccgcggcggcggcggcgggcaacgacggagag
gtgtcctcggtggaggccagcagcgtgaccctgaagaagaggatgaactccggcctcgcc
ttcgaccgccccgccaagaccttccccaacccgccggtcaacgcgcaggccttcctgcag
cagggctcggcggtgccggccaacaacgtgctgacgggcaccagcatcatcgacaagtac
tcacgcatcctcttcccgctgtccttcggcgccttcaacctggtctactggatcgtgtat
ctcaccaaggacaccatggagatgtccagggacaccgtgtga
DBGET
integrated database retrieval system
