Pseudoliparis swirei (Mariana hadal snailfish): 130212279
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Entry
130212279 CDS
T09868
Symbol
trip6
Name
(RefSeq) thyroid receptor-interacting protein 6
KO
K12792
thyroid receptor-interacting protein 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130212279 (trip6)
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF7576
zf-dskA_traR
Motif
Other DBs
NCBI-GeneID:
130212279
NCBI-ProteinID:
XP_056299445
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Position
21:complement(11984929..11992093)
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AA seq
573 aa
AA seq
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MSGPTWLPPRSLDSPEQAAAPPQMSNNAGSAIYRAPNKKGTADSRPKYGPSDQNGGVGAG
GGGGGGGMANRYMATGPTGGPIHQPSSDHYYSPPHGPKEGRNWSPHMDSYELMHRGPEKQ
AGYHSTKIDADIDSLTSMLADLDSHPQDANAQLYDNVPYNKYLPPDHYKPAGPPQGRPSM
GYPPHPQSQHHPAPRYPGEHQSPQYPASHQPDYYSASSTPKPYPQPVPASYTTASTPLGP
RFSVQVKTAQPVTYSQTGRQAEQAYTPPPPHQHVSRPPPQTCPQGWYPQHPSSQAQEMHS
EVVNKGSGAGPGGRVLQVPQSKRGMETHQTGPGAAQSPAYQQGIATTRPEEELDRLTKKL
VYDMNHPPVEDYFGRCARCGDNVVGDGSGCIAMEQVFHVECFTCITCHARLRGQPFYALD
KKSYCESCYISTLERCSKCSKPILDRILRAMGKAYHPRCFTCVVCNCCLDGVPFTVDAAS
QIHCIDDFHRKYAPRCSVCGEPIMPEQGQEETVRIVALDRSFHVNCYICEECGLLLSSEG
EGRGCYPLDGHILCKSCSACRIQDLSAKISTDC
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcccacctggctgccaccgaggtctctggatagccccgagcaagccgccgcc
cccccgcagatgtctaacaatgctgggtcagcaatctacagagctcccaacaagaagggc
acggctgactctcggcccaaatatggcccctctgaccagaacggaggtgtcggagcagga
ggaggaggaggtggaggtgggatggccaacaggtacatggctactggacccacaggtggg
cccattcatcagccgtctagcgatcactactactccccgcctcatggtcccaaggaaggc
cgcaactggagccctcacatggacagttacgagctgatgcaccgcggtccggaaaagcag
gcgggctatcactcgactaaaatcgacgctgatattgactccctcaccagcatgctcgct
gacctggacagccacccgcaggacgccaacgcgcagctgtacgacaacgtgccttacaac
aagtacctcccgccggatcactacaagcctgcaggccctcctcagggtcggccatccatg
ggctacccgcctcacccccagagccaacaccacccggctccccgctaccccggcgagcac
cagtcccctcagtaccccgcctcccaccagccggactactactccgcctcttcgaccccg
aagccctaccctcagcccgtcccggcctcctacaccacggcctccactcctctcgggccc
cggttcagcgtccaggtcaagacggctcagccggtcacctactcccagacggggcggcag
gccgagcaggcctacacgccgccccctccccaccagcacgtgtcgcggccccctccccag
acgtgtccgcagggctggtacccgcaacaccccagctcgcaagctcaggagatgcactcc
gaggtggtgaacaaggggagcggcgcaggacccggaggaagagttctgcaggtcccacag
tccaagagggggatggagactcatcagaccgggccgggggccgcgcagagtcctgcttat
cagcagggcatagcaaccaccaggcccgaggaggagttggatcgacttaccaagaagttg
gtatacgatatgaaccacccccctgtcgaggactattttggccgctgcgcccggtgcggg
gacaacgtggtcggtgacggcagcggctgcatcgccatggagcaggtgttccacgtggag
tgtttcacgtgcatcacctgccacgcccgtctccgggggcaacccttctacgccctcgac
aagaagagctactgtgagagttgctacatcagtacattagagcgctgttcaaagtgctcc
aagcccatcctggaccgcatcctgcgggccatggggaaggcctaccaccctcgctgtttc
acctgtgtggtgtgcaactgctgcttggacggggtccccttcaccgtcgacgccgcctct
cagatacactgcatcgacgacttccacaggaagtacgcccctcgctgctccgtatgcggg
gagcccatcatgcccgaacagggccaggaggagaccgtgaggatcgtggctctggaccgc
agcttccacgtcaactgttacatctgtgaggaatgtggcctcctgctgtcctctgagggg
gaggggcggggctgctacccgctggacggccacatcttgtgcaagagctgcagcgcgtgc
cgcatccaggacctctcggccaaaatctccacagactgctaa
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