Pseudoliparis swirei (Mariana hadal snailfish): 130212358
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Entry
130212358 CDS
T09868
Symbol
pls3
Name
(RefSeq) plastin-3
KO
K17336
plastin-3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130212358 (pls3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130212358 (pls3)
04147 Exosome [BR:
pswi04147
]
130212358 (pls3)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
Check point factors
Other check point factors
130212358 (pls3)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130212358 (pls3)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130212358 (pls3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_FSTL1
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
130212358
NCBI-ProteinID:
XP_056299462
LinkDB
All DBs
Position
3:9863054..9876341
Genome browser
AA seq
622 aa
AA seq
DB search
MTGKITKEEMEEMKEMFEKIDLDKNGYIVDYELHELLKEAGRPLPGYKVREIIQKLDRNK
DNRISFDEFLSIVQELKGSEIAKSFRKAINRKEGILAIGGTSVQSSEGTQHSFSEEERYA
FANWINTALEKDPDCQHVLPMDPNTDSLFTSVEDGIVLCKMVNLSVPDTIDERTINKKKL
TPFTIQENLNLALNSASAIGCHVVNIGALDLKEGKPHLVLGLLWQIIKIGLFADIELSRN
EALAALLRDGETLEDLMKLSPEELLLRWANFHLENAGQPKINNFSSDIKDSRAYFHLLNQ
ISPKGTEEAEPRIDINMGGFNEKDDMKRAEAMLQQADRLGCRQFVTPADVVSGNPKLNLA
FVANLFNKYPALTKPENEDINWGLLEGETREERTFRNWMNSLGVNPHVNHLYGDLHDAMV
ILQLYEKIKVPVDWNNKVNKPPYPKLGTNMKKLENCNYAVELGKSAKFSLVGIGGQDLND
GNPTLTLALVWQLMRRYTLNVLEGLGDGQKVNDDIIVKWVNKTLAEAGKSTKISSFKDKE
ISSSLAVVELIDAIQPGSINYELVKTGNLNEEDKLDNAKYAVSMARKIGARVYALPEDLV
EVTNKMVMTVFACLMGRGMKRV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactggaaaaataacaaaagaggagatggaggagatgaaagagatgtttgagaaaatt
gatctggacaaaaatggatatatcgttgattatgagctccatgaactccttaaagaagcc
ggccgtcccctgcctggatacaaggtccgagagatcatccagaaactagatcgcaacaag
gacaatcggatcagcttcgacgagtttctttcgattgtccaggagctgaagggcagtgaa
atagcaaaatccttccgcaaggccatcaacagaaaagagggcatcctggctatcggaggg
acgtctgtgcagtcaagcgaaggcacgcaacactcattctctgaggaggagcgatatgca
tttgctaactggatcaacacggcgctggaaaaagaccccgactgccaacacgtcctgccc
atggatcccaacacagactccctcttcacgtcggttgaggacggtatcgtactctgcaaa
atggtgaacctgtcggtgccagacactatcgatgagaggacgataaacaagaagaagctg
acaccgtttacgatacaagagaatctgaacctggccctgaactccgcttctgccatcggc
tgccatgtggtcaacatcggtgctttagacctgaaagaggggaaaccccatctggtgctg
ggcctgctgtggcagatcatcaagatcggtctgttcgctgacatcgagctcagcagaaat
gaagcgctggctgcattgctgagggacggggaaaccctggaggacctgatgaagctgtct
ccagaagaactgctgttgcgctgggcaaactttcacctggaaaatgctggccagccgaag
atcaacaacttcagctcagacatcaaggactcgagggcctatttccacctcctgaatcaa
atctctccaaaaggcaccgaggaggccgagccacgcatagacatcaacatggggggcttc
aacgagaaagacgacatgaagagggcagaggcgatgctccagcaggccgacagactcggc
tgtcgacagtttgtcaccccggctgacgtcgtcagcggaaaccccaaactcaacctcgcc
ttcgtggcaaacctgttcaacaaatatccagcgctgactaaacccgagaacgaggacatt
aactggggactgttggaaggtgagacacgagaagagaggacattcagaaactggatgaac
tctctgggagtgaacccacatgtcaatcatctgtatggagacctacatgatgccatggtc
atccttcaactctacgagaagattaaagtgcctgtggactggaacaacaaggtcaacaag
ccgccctaccccaaacttggaaccaacatgaaaaagctggagaactgtaactatgcggtg
gagctgggcaaatcagccaagttttccctcgttggcatcggcgggcaggacctgaacgat
ggcaacccgaccctgactctggctctggtgtggcagctgatgagaagatatacgttgaat
gtactggagggactgggtgatggacagaaagtaaatgatgacattatcgtgaagtgggtc
aacaaaactttggcagaagctggaaaatcaaccaagatttcaagcttcaaggacaaggag
atcagcagcagtttggccgtagtggaactgatagacgccatccagcccggcagcatcaac
tacgagctggtaaaaaccggaaacctcaacgaagaagataagctggacaacgccaagtac
gccgtttctatggcgcggaagatcggagcccgtgtctacgctctcccagaagaccttgtg
gaggtcacgaacaaaatggtcatgacagtcttcgcctgcttgatgggtcgggggatgaag
cgcgtctaa
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