Pseudoliparis swirei (Mariana hadal snailfish): 130212369
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Entry
130212369 CDS
T09868
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130212369 (vps52)
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Others
EARP complex
130212369 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
130212369 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Cep57_MT_bd
DUF3440
MscS_porin
DUF2125
Motif
Other DBs
NCBI-GeneID:
130212369
NCBI-ProteinID:
XP_056299465
LinkDB
All DBs
Position
1:complement(21163875..21176290)
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AA seq
724 aa
AA seq
DB search
MVDVAAAAVGAGLDVNTAGNSTDMAMAYLQDENTDGEMPNLNLGELDLTTDEFILDEVDI
HIQANLEDDLVKEALRTGVDLRQYSKQVEAELQRIEQASIKDYIKESQNIALLHNQITAC
DSILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVVPG
AMISSILDSPVTEQEFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKLKAVSKIR
EFILQKIYSFRKPMTNYQIPQNTLLKFRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSY
FKSYSGRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGQRGAVLSPAEL
EGPILVPHTAQRGDSRYPYETLFRSQHYALLDNGCREFLFLADFFMVAGNSALDLFNSIM
GKTLSMFLKSLSAYASDCFDSIAVFLCIHIVLRFRAVTAKRSIPALDKYWEAVLELLWPR
FELILEMNIHSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTNTLLGQL
LVEVENFVLKMAAEFPSRRDQLIFLMNNYDMMLSVLMERAADDSKEVEGFQQLLLARTQE
FIEEILSPPFGGMISFVKEAEALMEKGQLDRLKNDEVRITQLVRGFSSSWKQSVESMSQD
VMRSFTNFKNGTSIIQGALTQLIQYYHGFHKILNQPAFRSLAVRSELINLHHLMVEVKKH
KPNF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgtagctgctgcagccgttggagctgggctcgatgtaaacacagccggaaac
tcgaccgacatggccatggcgtatttacaagacgagaacactgatggagaaatgcccaac
ctgaacctgggggagctggacctcaccacggacgagttcatcctggacgaagtggacatt
cacatccaggccaacctggaggacgacctcgtgaaggaggcgctcagaacgggcgtggac
ctccggcagtactccaagcaggtggaggcggagctacagaggatcgaacaggcgtccatc
aaagactacatcaaagagagtcaaaacatcgctctcctgcacaaccagatcaccgcctgt
gactccatactggagcgcatggagggcatgctgagcggcttccagagcgacctgtcctcc
atcagcagtgagatccagacgctgcagcagcagtccgtcagcatgaacgtgcggctgaag
aaccggcaggcggtgcgcagccacctcagccagctggtggacgagctggtggtgcccggg
gccatgatctcctccatcctggacagccccgtgacggagcaggagttcctggagcagctc
cacgagctcaacaacaagatcaacttcgctaaggagctgagcttcagggagacgctggcc
tgctccgacatccaggacatcgtggaccggctgaagctcaaggccgtgtcgaagatccga
gagttcatcctccagaagatctactccttcaggaagcccatgaccaactaccagatcccc
cagaacacactgctgaagttcaggttcttctaccagttccttctggccaatgagaggacg
gtggcgaaggagatccgagacgagtacgtggacacgatgagtaagatctactacagctac
ttcaagtcctacagcggcaggttgctcaaagtgcagtacgaggaagtggcagacaaagac
gacctgatgggagtcgaagacacggccaagaaaggcttcttctccaaaccgtctctgagg
agcaggaacaccatcttcacgctgggccagcggggggcggtactgagccccgcggagctg
gaggggcccatcctggtcccccacacggcccagaggggggacagcaggtacccgtacgag
acgctgttccgcagccagcactacgcgctgctggacaacggctgcagggagttcctgttc
ctggccgacttcttcatggtggcggggaactcggccctggacctgttcaacagcatcatg
gggaagacgctcagcatgttcctgaagagcttgtctgcgtacgcgtccgactgcttcgac
agcatcgccgtgttcctctgcatccacatcgtgctgcgcttcagggccgtcacggccaag
aggagcatcccggccctcgacaagtactgggaggcggtgctggagctgctgtggccgagg
ttcgagctcatcctggagatgaacatccacagcatccggaacacagacccccagaagctg
ggagtcctggacaccagaccccactacatcactcgtcgctacgcagagttctcgtcggcc
atcgtcagcatcaaccagacgtttcccaacgagaggaccaacaccctgctgggacagctg
ctggtggaggtggagaactttgtgctgaagatggcggctgagtttccctccaggagagac
cagctgatcttcctcatgaacaactacgacatgatgctcagcgtcctcatggagagggcg
gcagacgacagcaaagaggtggagggattccaacagctgctcctggcccgcactcaggag
ttcatcgaggagatcctgtctcctcccttcggagggatgatctccttcgtgaaggaggcc
gaggcgttgatggagaaaggtcagctggaccgactgaagaacgacgaagttcgcatcact
cagctggttcggggcttctccagctcgtggaagcagtcggtggagtccatgagtcaggac
gtcatgaggtccttcaccaacttcaaaaatggaaccagcatcatccagggcgccctgacc
cagctgatccagtactaccacggcttccacaagatcctcaaccagcccgccttccgcagc
ctggccgtccgctcggagctcatcaacctgcaccacctcatggtggaggtgaagaagcac
aagcccaacttctaa
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integrated database retrieval system
